RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 HAUS7Q99871 368 aa26.8■■□□□ 1.88
RNF4-207ENST00000506706 INTS5Q6P9B9 1019 aaKnown RBP26.79■■□□□ 1.88
RNF4-207ENST00000506706 CCDC171Q6TFL3 1326 aa26.78■■□□□ 1.88
RNF4-207ENST00000506706 EIF5P55010 431 aaKnown RBP26.78■■□□□ 1.88
RNF4-207ENST00000506706 FAM98CQ17RN3 349 aaKnown RBP26.78■■□□□ 1.88
RNF4-207ENST00000506706 TMX3Q96JJ7 454 aa26.78■■□□□ 1.88
RNF4-207ENST00000506706 UPF3BQ9BZI7 483 aaKnown RBP26.78■■□□□ 1.88
RNF4-207ENST00000506706 BCL9LQ86UU0 1499 aa26.78■■□□□ 1.88
RNF4-207ENST00000506706 ZNF609O15014 1411 aa26.78■■□□□ 1.88
RNF4-207ENST00000506706 IFIT5Q13325 482 aaKnown RBP26.78■■□□□ 1.88
RNF4-207ENST00000506706 SMARCC1Q92922 1105 aaPredicted RBP26.78■■□□□ 1.88
RNF4-207ENST00000506706 PUS3Q9BZE2 481 aaKnown RBP26.78■■□□□ 1.88
RNF4-207ENST00000506706 CICQ96RK0 1608 aaPredicted RBP26.78■■□□□ 1.88
RNF4-207ENST00000506706 RFX7Q2KHR2 1363 aa26.77■■□□□ 1.88
RNF4-207ENST00000506706 CRKLP46109 303 aaKnown RBP26.77■■□□□ 1.88
RNF4-207ENST00000506706 EDC3Q96F86 508 aaKnown RBP26.77■■□□□ 1.88
RNF4-207ENST00000506706 GBP4Q96PP9 640 aa26.77■■□□□ 1.88
RNF4-207ENST00000506706 CEP126Q9P2H0 1117 aa26.77■■□□□ 1.88
RNF4-207ENST00000506706 PALLDQ8WX93 1383 aa26.77■■□□□ 1.88
RNF4-207ENST00000506706 A0A0D9SFI3 127 aa26.77■■□□□ 1.88
RNF4-207ENST00000506706 TIMM10P62072 90 aa26.77■■□□□ 1.88
RNF4-207ENST00000506706 TAF7LQ5H9L4 462 aa26.77■■□□□ 1.88
RNF4-207ENST00000506706 RASEFQ8IZ41 740 aa26.77■■□□□ 1.88
RNF4-207ENST00000506706 DNAJC2Q99543 621 aaKnown RBP26.77■■□□□ 1.88
RNF4-207ENST00000506706 TRMT112Q9UI30 125 aaKnown RBP26.77■■□□□ 1.88
RNF4-207ENST00000506706 DDX11L8A8MPP1 907 aa26.76■■□□□ 1.87
RNF4-207ENST00000506706 NUCB2P80303 420 aa26.76■■□□□ 1.87
RNF4-207ENST00000506706 ZNF34Q8IZ26 560 aa26.75■■□□□ 1.87
RNF4-207ENST00000506706 SYNE4Q8N205 404 aa26.75■■□□□ 1.87
RNF4-207ENST00000506706 RREB1Q92766 1687 aa26.75■■□□□ 1.87
RNF4-207ENST00000506706 KCNB2Q92953 911 aa26.75■■□□□ 1.87
RNF4-207ENST00000506706 CCDC85AQ96PX6 553 aaPredicted RBP26.75■■□□□ 1.87
RNF4-207ENST00000506706 A0A1B0GUL7 405 aa26.74■■□□□ 1.87
RNF4-207ENST00000506706 IRS4O14654 1257 aaPredicted RBP26.74■■□□□ 1.87
RNF4-207ENST00000506706 ITPK1Q13572 414 aa26.74■■□□□ 1.87
RNF4-207ENST00000506706 ZGPATQ8N5A5 531 aaKnown RBP26.74■■□□□ 1.87
RNF4-207ENST00000506706 MAP4K1Q92918 833 aa26.74■■□□□ 1.87
RNF4-207ENST00000506706 MED23Q9ULK4 1368 aa26.74■■□□□ 1.87
RNF4-207ENST00000506706 CTSWP56202 376 aa26.74■■□□□ 1.87
RNF4-207ENST00000506706 NECTIN1Q15223 517 aa26.74■■□□□ 1.87
RNF4-207ENST00000506706 TTLL11Q8NHH1 800 aa26.74■■□□□ 1.87
RNF4-207ENST00000506706 AKAP2Q9Y2D5 859 aa26.74■■□□□ 1.87
RNF4-207ENST00000506706 MYH3P11055 1940 aa26.73■■□□□ 1.87
RNF4-207ENST00000506706 SSFA2P28290 1259 aa26.73■■□□□ 1.87
RNF4-207ENST00000506706 CUL4AQ13619 759 aa26.73■■□□□ 1.87
RNF4-207ENST00000506706 PRPF40BQ6NWY9 871 aaKnown RBP26.73■■□□□ 1.87
RNF4-207ENST00000506706 FNBP4Q8N3X1 1017 aaPredicted RBP26.73■■□□□ 1.87
RNF4-207ENST00000506706 UBN2Q6ZU65 1347 aa26.73■■□□□ 1.87
RNF4-207ENST00000506706 KCNQ2O43526 872 aa26.72■■□□□ 1.87
RNF4-207ENST00000506706 RBM8AQ9Y5S9 174 aaKnown RBP26.72■■□□□ 1.87
RNF4-207ENST00000506706 NDUFB9Q9Y6M9 179 aa26.72■■□□□ 1.87
RNF4-207ENST00000506706 PDE8AO60658 829 aa26.72■■□□□ 1.87
RNF4-207ENST00000506706 KCNJ4P48050 445 aa26.72■■□□□ 1.87
RNF4-207ENST00000506706 ZKSCAN1P17029 563 aaPredicted RBP26.7■■□□□ 1.87
RNF4-207ENST00000506706 ITGA6P23229 1130 aa26.7■■□□□ 1.87
RNF4-207ENST00000506706 NOL8Q76FK4 1167 aaKnown RBP26.7■■□□□ 1.87
RNF4-207ENST00000506706 KBTBD3Q8NAB2 608 aa26.7■■□□□ 1.87
RNF4-207ENST00000506706 INTS4Q96HW7 963 aaKnown RBP26.7■■□□□ 1.87
RNF4-207ENST00000506706 TTC14Q96N46 770 aa26.7■■□□□ 1.87
RNF4-207ENST00000506706 ANKRD18BA2A2Z9 1011 aa26.7■■□□□ 1.86
RNF4-207ENST00000506706 DDX46Q7L014 1031 aaKnown RBP26.7■■□□□ 1.86
RNF4-207ENST00000506706 TICAM2Q86XR7 235 aa26.7■■□□□ 1.86
RNF4-207ENST00000506706 TM6SF1Q9BZW5 370 aa26.7■■□□□ 1.86
RNF4-207ENST00000506706 GREM2Q9H772 168 aa26.7■■□□□ 1.86
RNF4-207ENST00000506706 SPATA31A6Q5VVP1 1343 aa26.7■■□□□ 1.86
RNF4-207ENST00000506706 CREB3L3Q68CJ9 461 aa26.69■■□□□ 1.86
RNF4-207ENST00000506706 PAG1Q9NWQ8 432 aa26.69■■□□□ 1.86
RNF4-207ENST00000506706 CYP2E1P05181 493 aaPredicted RBP26.69■■□□□ 1.86
RNF4-207ENST00000506706 CASTP20810 708 aaKnown RBP26.69■■□□□ 1.86
RNF4-207ENST00000506706 CLEC17AQ6ZS10 378 aa26.69■■□□□ 1.86
RNF4-207ENST00000506706 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.69■■□□□ 1.86
RNF4-207ENST00000506706 AK7Q96M32 723 aa26.69■■□□□ 1.86
RNF4-207ENST00000506706 MYH14Q7Z406 1995 aaKnown RBP26.68■■□□□ 1.86
RNF4-207ENST00000506706 IFIT1P09914 478 aaKnown RBP26.68■■□□□ 1.86
RNF4-207ENST00000506706 ZNF589Q86UQ0 364 aaPredicted RBP26.68■■□□□ 1.86
RNF4-207ENST00000506706 ZNF831Q5JPB2 1677 aa26.67■■□□□ 1.86
RNF4-207ENST00000506706 CAMTA2O94983 1202 aa26.67■■□□□ 1.86
RNF4-207ENST00000506706 RNF20Q5VTR2 975 aa26.67■■□□□ 1.86
RNF4-207ENST00000506706 LDHAL6AQ6ZMR3 332 aa26.67■■□□□ 1.86
RNF4-207ENST00000506706 JAKMIP1Q96N16 626 aaKnown RBP26.67■■□□□ 1.86
RNF4-207ENST00000506706 GOLIM4O00461 696 aa26.67■■□□□ 1.86
RNF4-207ENST00000506706 PTMSP20962 102 aa26.67■■□□□ 1.86
RNF4-207ENST00000506706 CCDC158Q5M9N0 1113 aa26.67■■□□□ 1.86
RNF4-207ENST00000506706 USP21Q9UK80 565 aa26.67■■□□□ 1.86
RNF4-207ENST00000506706 RIPOR2Q9Y4F9 1068 aa26.67■■□□□ 1.86
RNF4-207ENST00000506706 TAF5LO75529 589 aa26.66■■□□□ 1.86
RNF4-207ENST00000506706 ZSWIM6Q9HCJ5 1215 aa26.66■■□□□ 1.86
RNF4-207ENST00000506706 COL5A3P25940 1745 aaPredicted RBP26.66■■□□□ 1.86
RNF4-207ENST00000506706 SPEF2Q9C093 1822 aa26.66■■□□□ 1.86
RNF4-207ENST00000506706 SLC27A2O14975 620 aa26.66■■□□□ 1.86
RNF4-207ENST00000506706 TRAK2O60296 914 aa26.66■■□□□ 1.86
RNF4-207ENST00000506706 MCMDC2Q4G0Z9 681 aa26.66■■□□□ 1.86
RNF4-207ENST00000506706 PARP10Q53GL7 1025 aa26.66■■□□□ 1.86
RNF4-207ENST00000506706 GORABQ5T7V8 394 aa26.66■■□□□ 1.86
RNF4-207ENST00000506706 XAGE2Q96GT9 111 aa26.66■■□□□ 1.86
RNF4-207ENST00000506706 AK2P54819 239 aa26.65■■□□□ 1.86
RNF4-207ENST00000506706 ADCK5Q3MIX3 580 aa26.65■■□□□ 1.86
RNF4-207ENST00000506706 METTL24Q5JXM2 366 aa26.65■■□□□ 1.86
RNF4-207ENST00000506706 SUSD4Q5VX71 490 aa26.65■■□□□ 1.86
RNF4-207ENST00000506706 CNNM1Q9NRU3 951 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms