RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 LAMB2P55268 1798 aa25.81■■□□□ 1.72
UBE2D3-220ENST00000505307 PCNTO95613 3336 aa25.8■■□□□ 1.72
UBE2D3-220ENST00000505307 ADAMTSL1Q8N6G6 1762 aa25.8■■□□□ 1.72
UBE2D3-220ENST00000505307 TMEM88BA6NKF7 163 aa25.8■■□□□ 1.72
UBE2D3-220ENST00000505307 SCNN1DP51172 638 aa25.8■■□□□ 1.72
UBE2D3-220ENST00000505307 KIAA2012Q0VF49 1180 aa25.8■■□□□ 1.72
UBE2D3-220ENST00000505307 CNTROBQ8N137 903 aa25.8■■□□□ 1.72
UBE2D3-220ENST00000505307 ELL2O00472 640 aaPredicted RBP25.79■■□□□ 1.72
UBE2D3-220ENST00000505307 CCDC30Q5VVM6 783 aa25.79■■□□□ 1.72
UBE2D3-220ENST00000505307 USP50Q70EL3 339 aaPredicted RBP25.79■■□□□ 1.72
UBE2D3-220ENST00000505307 CCDC27Q2M243 656 aa25.78■■□□□ 1.72
UBE2D3-220ENST00000505307 COL13A1Q5TAT6 717 aaPredicted RBP25.78■■□□□ 1.72
UBE2D3-220ENST00000505307 IRS4O14654 1257 aaPredicted RBP25.77■■□□□ 1.72
UBE2D3-220ENST00000505307 DDX58O95786 925 aaKnown RBP25.77■■□□□ 1.72
UBE2D3-220ENST00000505307 EPS15P42566 896 aa25.77■■□□□ 1.72
UBE2D3-220ENST00000505307 MAP1SQ66K74 1059 aaPredicted RBP25.77■■□□□ 1.72
UBE2D3-220ENST00000505307 ZBTB38Q8NAP3 1195 aaPredicted RBP25.77■■□□□ 1.72
UBE2D3-220ENST00000505307 C8orf58Q8NAV2 365 aa25.77■■□□□ 1.72
UBE2D3-220ENST00000505307 PHAXQ9H814 394 aaKnown RBP25.77■■□□□ 1.72
UBE2D3-220ENST00000505307 MKRN1Q9UHC7 482 aaKnown RBP25.77■■□□□ 1.72
UBE2D3-220ENST00000505307 CNTNAP1P78357 1384 aa25.77■■□□□ 1.72
UBE2D3-220ENST00000505307 HSPA1AP0DMV8 641 aaKnown RBP25.76■■□□□ 1.71
UBE2D3-220ENST00000505307 HSPA1BP0DMV9 641 aaKnown RBP25.76■■□□□ 1.71
UBE2D3-220ENST00000505307 CXCL9Q07325 125 aa25.76■■□□□ 1.71
UBE2D3-220ENST00000505307 NCBP3Q53F19 620 aaKnown RBP25.76■■□□□ 1.71
UBE2D3-220ENST00000505307 CCDC191Q8NCU4 936 aa25.76■■□□□ 1.71
UBE2D3-220ENST00000505307 CDHR2Q9BYE9 1310 aa25.75■■□□□ 1.71
UBE2D3-220ENST00000505307 TNIP1Q15025 636 aa25.75■■□□□ 1.71
UBE2D3-220ENST00000505307 CIAPIN1Q6FI81 312 aa25.75■■□□□ 1.71
UBE2D3-220ENST00000505307 GPRC5DQ9NZD1 345 aa25.75■■□□□ 1.71
UBE2D3-220ENST00000505307 DDX60Q8IY21 1712 aaKnown RBP25.74■■□□□ 1.71
UBE2D3-220ENST00000505307 ZNF428Q96B54 188 aa25.74■■□□□ 1.71
UBE2D3-220ENST00000505307 ADARB2Q9NS39 739 aaKnown RBP25.74■■□□□ 1.71
UBE2D3-220ENST00000505307 CELF1Q92879 486 aaKnown RBP25.73■■□□□ 1.71
UBE2D3-220ENST00000505307 MYD88Q99836 296 aa25.73■■□□□ 1.71
UBE2D3-220ENST00000505307 LTBP1Q14766 1721 aa25.72■■□□□ 1.71
UBE2D3-220ENST00000505307 PCCAP05165 728 aaPredicted RBP25.72■■□□□ 1.71
UBE2D3-220ENST00000505307 CCDC184Q52MB2 194 aa25.72■■□□□ 1.71
UBE2D3-220ENST00000505307 RTL5Q5HYW3 569 aaPredicted RBP25.72■■□□□ 1.71
UBE2D3-220ENST00000505307 METTL22Q9BUU2 404 aaPredicted RBP25.72■■□□□ 1.71
UBE2D3-220ENST00000505307 NSFL1CQ9UNZ2 370 aaKnown RBP25.72■■□□□ 1.71
UBE2D3-220ENST00000505307 RPS8P62241 208 aaKnown RBP25.71■■□□□ 1.71
UBE2D3-220ENST00000505307 WWC1Q8IX03 1113 aa25.71■■□□□ 1.71
UBE2D3-220ENST00000505307 CWC25Q9NXE8 425 aaPredicted RBP25.71■■□□□ 1.71
UBE2D3-220ENST00000505307 LRRC37AA6NMS7 1700 aa25.71■■□□□ 1.71
UBE2D3-220ENST00000505307 IL16Q14005 1332 aa25.7■■□□□ 1.71
UBE2D3-220ENST00000505307 GMPSP49915 693 aaPredicted RBP25.7■■□□□ 1.7
UBE2D3-220ENST00000505307 WASHC4Q2M389 1173 aa25.7■■□□□ 1.7
UBE2D3-220ENST00000505307 STK31Q9BXU1 1019 aa25.7■■□□□ 1.7
UBE2D3-220ENST00000505307 RASSF10A6NK89 507 aa25.69■■□□□ 1.7
UBE2D3-220ENST00000505307 TSPYL6Q8N831 410 aa25.69■■□□□ 1.7
UBE2D3-220ENST00000505307 EYA3Q99504 573 aa25.69■■□□□ 1.7
UBE2D3-220ENST00000505307 BCL2L13Q9BXK5 485 aa25.69■■□□□ 1.7
UBE2D3-220ENST00000505307 RAD17O75943 681 aa25.68■■□□□ 1.7
UBE2D3-220ENST00000505307 CCDC152Q4G0S7 254 aa25.68■■□□□ 1.7
UBE2D3-220ENST00000505307 TAF1P21675 1872 aa25.68■■□□□ 1.7
UBE2D3-220ENST00000505307 C6orf229H3BNL8 230 aa25.67■■□□□ 1.7
UBE2D3-220ENST00000505307 ANP32CO43423 234 aa25.67■■□□□ 1.7
UBE2D3-220ENST00000505307 PDE8AO60658 829 aa25.67■■□□□ 1.7
UBE2D3-220ENST00000505307 VEGFBP49765 207 aa25.67■■□□□ 1.7
UBE2D3-220ENST00000505307 DEFB115Q30KQ5 88 aa25.67■■□□□ 1.7
UBE2D3-220ENST00000505307 KSR2Q6VAB6 950 aa25.67■■□□□ 1.7
UBE2D3-220ENST00000505307 TSR2Q969E8 191 aaKnown RBP25.67■■□□□ 1.7
UBE2D3-220ENST00000505307 MRS2Q9HD23 443 aa25.67■■□□□ 1.7
UBE2D3-220ENST00000505307 DUOX1Q9NRD9 1551 aa25.67■■□□□ 1.7
UBE2D3-220ENST00000505307 GPSM2P81274 684 aa25.66■■□□□ 1.7
UBE2D3-220ENST00000505307 ZC3H15Q8WU90 426 aaKnown RBP25.66■■□□□ 1.7
UBE2D3-220ENST00000505307 MAP3K2Q9Y2U5 619 aa25.66■■□□□ 1.7
UBE2D3-220ENST00000505307 YDJCA8MPS7 323 aa25.65■■□□□ 1.7
UBE2D3-220ENST00000505307 NEXNQ0ZGT2 675 aa25.65■■□□□ 1.7
UBE2D3-220ENST00000505307 TNS4Q8IZW8 715 aa25.65■■□□□ 1.7
UBE2D3-220ENST00000505307 DPF2Q92785 391 aa25.65■■□□□ 1.7
UBE2D3-220ENST00000505307 PODXL2Q9NZ53 605 aa25.65■■□□□ 1.7
UBE2D3-220ENST00000505307 POLLQ9UGP5 575 aa25.65■■□□□ 1.7
UBE2D3-220ENST00000505307 PGAP2Q9UHJ9 254 aa25.65■■□□□ 1.7
UBE2D3-220ENST00000505307 ABT1Q9ULW3 272 aaKnown RBP25.65■■□□□ 1.7
UBE2D3-220ENST00000505307 ZNF316A6NFI3 1004 aaPredicted RBP25.64■■□□□ 1.7
UBE2D3-220ENST00000505307 TWISTNBQ3B726 338 aaPredicted RBP25.64■■□□□ 1.7
UBE2D3-220ENST00000505307 PI4KAP2A4QPH2 592 aa25.63■■□□□ 1.69
UBE2D3-220ENST00000505307 H7C1D1 291 aa25.63■■□□□ 1.69
UBE2D3-220ENST00000505307 PI4KAP1Q8N8J0 262 aa25.63■■□□□ 1.69
UBE2D3-220ENST00000505307 TBC1D16Q8TBP0 767 aa25.63■■□□□ 1.69
UBE2D3-220ENST00000505307 SEC31BQ9NQW1 1179 aa25.63■■□□□ 1.69
UBE2D3-220ENST00000505307 CNOT7Q9UIV1 285 aaKnown RBP25.63■■□□□ 1.69
UBE2D3-220ENST00000505307 RIMBP2O15034 1052 aa25.62■■□□□ 1.69
UBE2D3-220ENST00000505307 CAPN15O75808 1086 aa25.62■■□□□ 1.69
UBE2D3-220ENST00000505307 AIDAQ96BJ3 306 aa25.62■■□□□ 1.69
UBE2D3-220ENST00000505307 ZC3H12CQ9C0D7 883 aaKnown RBP25.62■■□□□ 1.69
UBE2D3-220ENST00000505307 RPS12P25398 132 aaKnown RBP25.61■■□□□ 1.69
UBE2D3-220ENST00000505307 DBNDD1Q9H9R9 158 aa25.61■■□□□ 1.69
UBE2D3-220ENST00000505307 ANKIB1Q9P2G1 1089 aa25.61■■□□□ 1.69
UBE2D3-220ENST00000505307 IGKV5-2P06315 115 aa25.6■■□□□ 1.69
UBE2D3-220ENST00000505307 WDR63Q8IWG1 891 aa25.6■■□□□ 1.69
UBE2D3-220ENST00000505307 GGA1Q9UJY5 639 aa25.6■■□□□ 1.69
UBE2D3-220ENST00000505307 PSMD14O00487 310 aa25.59■■□□□ 1.69
UBE2D3-220ENST00000505307 ECE2O60344 883 aa25.59■■□□□ 1.69
UBE2D3-220ENST00000505307 SLC4A2P04920 1241 aa25.59■■□□□ 1.69
UBE2D3-220ENST00000505307 ECE1P42892 770 aa25.59■■□□□ 1.69
UBE2D3-220ENST00000505307 ANKRD18AQ8IVF6 992 aa25.59■■□□□ 1.69
UBE2D3-220ENST00000505307 MICALL2Q8IY33 904 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms