RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 RGMBQ6NW40 437 aa21.08■□□□□ 0.97
PDLIM7-213ENST00000505074 PPP1R42Q7Z4L9 355 aa21.08■□□□□ 0.97
PDLIM7-213ENST00000505074 TRPM4Q8TD43 1214 aa21.08■□□□□ 0.97
PDLIM7-213ENST00000505074 THUMPD2Q9BTF0 503 aaKnown RBP21.08■□□□□ 0.97
PDLIM7-213ENST00000505074 CNOT7Q9UIV1 285 aaKnown RBP21.08■□□□□ 0.97
PDLIM7-213ENST00000505074 RRP7AQ9Y3A4 280 aaKnown RBP21.08■□□□□ 0.97
PDLIM7-213ENST00000505074 POLR2AP24928 1970 aaKnown RBP21.08■□□□□ 0.96
PDLIM7-213ENST00000505074 H7C1D1 291 aa21.07■□□□□ 0.96
PDLIM7-213ENST00000505074 RAD17O75943 681 aa21.07■□□□□ 0.96
PDLIM7-213ENST00000505074 NTSR2O95665 410 aa21.07■□□□□ 0.96
PDLIM7-213ENST00000505074 DPP8Q6V1X1 898 aaPredicted RBP21.07■□□□□ 0.96
PDLIM7-213ENST00000505074 TTLL7Q6ZT98 887 aa21.07■□□□□ 0.96
PDLIM7-213ENST00000505074 USP48Q86UV5 1035 aa21.07■□□□□ 0.96
PDLIM7-213ENST00000505074 PLEKHF1Q96S99 279 aa21.07■□□□□ 0.96
PDLIM7-213ENST00000505074 ZBTB3Q9H5J0 574 aa21.07■□□□□ 0.96
PDLIM7-213ENST00000505074 KIAA2012Q0VF49 1180 aa21.06■□□□□ 0.96
PDLIM7-213ENST00000505074 C3orf67Q6ZVT6 689 aa21.06■□□□□ 0.96
PDLIM7-213ENST00000505074 ZNF34Q8IZ26 560 aa21.06■□□□□ 0.96
PDLIM7-213ENST00000505074 CCDC102AQ96A19 550 aa21.06■□□□□ 0.96
PDLIM7-213ENST00000505074 MYL6BP14649 208 aa21.05■□□□□ 0.96
PDLIM7-213ENST00000505074 MPNDQ8N594 471 aa21.05■□□□□ 0.96
PDLIM7-213ENST00000505074 ABCC4O15439 1325 aa21.04■□□□□ 0.96
PDLIM7-213ENST00000505074 FAM155AB1AL88 458 aaPredicted RBP21.04■□□□□ 0.96
PDLIM7-213ENST00000505074 KIF23Q02241 960 aaPredicted RBP21.04■□□□□ 0.96
PDLIM7-213ENST00000505074 RALBP1Q15311 655 aa21.04■□□□□ 0.96
PDLIM7-213ENST00000505074 PARP10Q53GL7 1025 aa21.04■□□□□ 0.96
PDLIM7-213ENST00000505074 GIGYF2Q6Y7W6 1299 aaKnown RBP21.04■□□□□ 0.96
PDLIM7-213ENST00000505074 SP8Q8IXZ3 490 aa21.04■□□□□ 0.96
PDLIM7-213ENST00000505074 C2orf69Q8N8R5 385 aa21.04■□□□□ 0.96
PDLIM7-213ENST00000505074 LAMB2P55268 1798 aa21.03■□□□□ 0.96
PDLIM7-213ENST00000505074 ANKRD36CQ5JPF3 1778 aa21.03■□□□□ 0.96
PDLIM7-213ENST00000505074 TRPA1O75762 1119 aa21.03■□□□□ 0.96
PDLIM7-213ENST00000505074 BBOX1O75936 387 aa21.03■□□□□ 0.96
PDLIM7-213ENST00000505074 DDX10Q13206 875 aaKnown RBP21.03■□□□□ 0.96
PDLIM7-213ENST00000505074 MICALL2Q8IY33 904 aa21.03■□□□□ 0.96
PDLIM7-213ENST00000505074 GBA2Q9HCG7 927 aaPredicted RBP21.03■□□□□ 0.96
PDLIM7-213ENST00000505074 RNF186Q9NXI6 227 aa21.03■□□□□ 0.96
PDLIM7-213ENST00000505074 ZNF157P51786 506 aaPredicted RBP21.02■□□□□ 0.96
PDLIM7-213ENST00000505074 SLC10A5Q5PT55 438 aa21.02■□□□□ 0.96
PDLIM7-213ENST00000505074 SHTN1A0MZ66 631 aa21.01■□□□□ 0.95
PDLIM7-213ENST00000505074 EIF4A1P60842 406 aaKnown RBP21.01■□□□□ 0.95
PDLIM7-213ENST00000505074 DLK2Q6UY11 383 aa21.01■□□□□ 0.95
PDLIM7-213ENST00000505074 KRT26Q7Z3Y9 468 aa21.01■□□□□ 0.95
PDLIM7-213ENST00000505074 CTU1Q7Z7A3 348 aaKnown RBP21.01■□□□□ 0.95
PDLIM7-213ENST00000505074 TSPYL4Q9UJ04 414 aa21.01■□□□□ 0.95
PDLIM7-213ENST00000505074 RIPK4P57078 832 aa21■□□□□ 0.95
PDLIM7-213ENST00000505074 DPF2Q92785 391 aa21■□□□□ 0.95
PDLIM7-213ENST00000505074 UTP14AQ9BVJ6 771 aaKnown RBP21■□□□□ 0.95
PDLIM7-213ENST00000505074 YDJCA8MPS7 323 aa20.99■□□□□ 0.95
PDLIM7-213ENST00000505074 SAMD7Q7Z3H4 446 aa20.99■□□□□ 0.95
PDLIM7-213ENST00000505074 DCPSQ96C86 337 aaKnown RBP20.99■□□□□ 0.95
PDLIM7-213ENST00000505074 ZBTB12Q9Y330 459 aaPredicted RBP20.99■□□□□ 0.95
PDLIM7-213ENST00000505074 TAF1P21675 1872 aa20.98■□□□□ 0.95
PDLIM7-213ENST00000505074 TBC1D10BQ4KMP7 808 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-213ENST00000505074 DDX46Q7L014 1031 aaKnown RBP20.97■□□□□ 0.95
PDLIM7-213ENST00000505074 REM2Q8IYK8 340 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-213ENST00000505074 MYBBP1AQ9BQG0 1328 aaKnown RBP20.97■□□□□ 0.95
PDLIM7-213ENST00000505074 SLC10A3P09131 477 aa20.96■□□□□ 0.95
PDLIM7-213ENST00000505074 LMOD3Q0VAK6 560 aa20.96■□□□□ 0.95
PDLIM7-213ENST00000505074 CCDC146Q8IYE0 955 aa20.96■□□□□ 0.95
PDLIM7-213ENST00000505074 CSRNP1Q96S65 589 aa20.96■□□□□ 0.95
PDLIM7-213ENST00000505074 ERBB4Q15303 1308 aa20.96■□□□□ 0.95
PDLIM7-213ENST00000505074 ADM5C9JUS6 153 aa20.95■□□□□ 0.94
PDLIM7-213ENST00000505074 EIF2S2P20042 333 aaKnown RBP20.95■□□□□ 0.94
PDLIM7-213ENST00000505074 GRAPQ13588 217 aa20.95■□□□□ 0.94
PDLIM7-213ENST00000505074 WDR43Q15061 677 aaKnown RBP eCLIP20.95■□□□□ 0.94
PDLIM7-213ENST00000505074 NEUROD2Q15784 382 aa20.95■□□□□ 0.94
PDLIM7-213ENST00000505074 GRAPLQ8TC17 118 aaPredicted RBP20.95■□□□□ 0.94
PDLIM7-213ENST00000505074 HPS5Q9UPZ3 1129 aa20.95■□□□□ 0.94
PDLIM7-213ENST00000505074 DUOX1Q9NRD9 1551 aa20.94■□□□□ 0.94
PDLIM7-213ENST00000505074 PSMD14O00487 310 aa20.94■□□□□ 0.94
PDLIM7-213ENST00000505074 TMPOP42166 694 aaKnown RBP20.94■□□□□ 0.94
PDLIM7-213ENST00000505074 PKN2Q16513 984 aaKnown RBP20.94■□□□□ 0.94
PDLIM7-213ENST00000505074 RBM26Q5T8P6 1007 aaKnown RBP20.94■□□□□ 0.94
PDLIM7-213ENST00000505074 TMC4Q7Z404 712 aa20.94■□□□□ 0.94
PDLIM7-213ENST00000505074 LRRC37AA6NMS7 1700 aa20.94■□□□□ 0.94
PDLIM7-213ENST00000505074 DDX60Q8IY21 1712 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-213ENST00000505074 RPS12P25398 132 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-213ENST00000505074 WASHC4Q2M389 1173 aa20.93■□□□□ 0.94
PDLIM7-213ENST00000505074 EGFRP00533 1210 aa20.92■□□□□ 0.94
PDLIM7-213ENST00000505074 HCLS1P14317 486 aaPredicted RBP20.92■□□□□ 0.94
PDLIM7-213ENST00000505074 SULF1Q8IWU6 871 aa20.92■□□□□ 0.94
PDLIM7-213ENST00000505074 GCC1Q96CN9 775 aa20.92■□□□□ 0.94
PDLIM7-213ENST00000505074 DBNDD1Q9H9R9 158 aa20.92■□□□□ 0.94
PDLIM7-213ENST00000505074 HDAC9Q9UKV0 1011 aa20.92■□□□□ 0.94
PDLIM7-213ENST00000505074 LAS1LQ9Y4W2 734 aaKnown RBP20.91■□□□□ 0.94
PDLIM7-213ENST00000505074 HSP90AB3PQ58FF7 597 aa20.9■□□□□ 0.94
PDLIM7-213ENST00000505074 NECTIN2Q92692 538 aa20.9■□□□□ 0.94
PDLIM7-213ENST00000505074 KIF4BQ2VIQ3 1234 aa20.89■□□□□ 0.93
PDLIM7-213ENST00000505074 GGA3Q9NZ52 723 aa20.89■□□□□ 0.93
PDLIM7-213ENST00000505074 NSFL1CQ9UNZ2 370 aaKnown RBP20.89■□□□□ 0.93
PDLIM7-213ENST00000505074 SH3TC1Q8TE82 1336 aa20.88■□□□□ 0.93
PDLIM7-213ENST00000505074 RIMBP2O15034 1052 aa20.88■□□□□ 0.93
PDLIM7-213ENST00000505074 ANXA1P04083 346 aa20.88■□□□□ 0.93
PDLIM7-213ENST00000505074 NLRP10Q86W26 655 aa20.88■□□□□ 0.93
PDLIM7-213ENST00000505074 RASAL3Q86YV0 1011 aa20.88■□□□□ 0.93
PDLIM7-213ENST00000505074 CDCA5Q96FF9 252 aa20.88■□□□□ 0.93
PDLIM7-213ENST00000505074 TRMT112Q9UI30 125 aaKnown RBP20.88■□□□□ 0.93
PDLIM7-213ENST00000505074 C6orf229H3BNL8 230 aa20.87■□□□□ 0.93
PDLIM7-213ENST00000505074 LRP10Q7Z4F1 713 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms