RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 TAF6LQ9Y6J9 622 aa7.72□□□□□ -1.17
COPB2-204ENST00000504295 WDR33Q9C0J8 1336 aaKnown RBP7.72□□□□□ -1.17
COPB2-204ENST00000504295 CANXP27824 592 aaKnown RBP7.72□□□□□ -1.17
COPB2-204ENST00000504295 MTERF4Q7Z6M4 381 aaKnown RBP7.72□□□□□ -1.17
COPB2-204ENST00000504295 L2HGDHQ9H9P8 463 aa7.72□□□□□ -1.17
COPB2-204ENST00000504295 SIP14410 1827 aa7.72□□□□□ -1.17
COPB2-204ENST00000504295 LETM1O95202 739 aaPredicted RBP7.72□□□□□ -1.17
COPB2-204ENST00000504295 CCDC94Q9BW85 323 aaPredicted RBP7.72□□□□□ -1.17
COPB2-204ENST00000504295 ST18O60284 1047 aa7.71□□□□□ -1.17
COPB2-204ENST00000504295 TAF7Q15545 349 aaPredicted RBP7.71□□□□□ -1.17
COPB2-204ENST00000504295 CSPP1Q1MSJ5 1256 aa7.71□□□□□ -1.17
COPB2-204ENST00000504295 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.71□□□□□ -1.17
COPB2-204ENST00000504295 PARP14Q460N5 1801 aa7.71□□□□□ -1.18
COPB2-204ENST00000504295 SLC4A2P04920 1241 aa7.71□□□□□ -1.18
COPB2-204ENST00000504295 LMOD2Q6P5Q4 547 aa7.71□□□□□ -1.18
COPB2-204ENST00000504295 PGBD1Q96JS3 809 aa7.71□□□□□ -1.18
COPB2-204ENST00000504295 COPRSQ9NQ92 184 aa7.71□□□□□ -1.18
COPB2-204ENST00000504295 UBR3Q6ZT12 1888 aa7.71□□□□□ -1.18
COPB2-204ENST00000504295 NBPF7P0C2Y1 421 aaPredicted RBP7.7□□□□□ -1.18
COPB2-204ENST00000504295 FAM193AP78312 1265 aa7.7□□□□□ -1.18
COPB2-204ENST00000504295 ME3Q16798 604 aa7.7□□□□□ -1.18
COPB2-204ENST00000504295 AKAP4Q5JQC9 854 aa7.7□□□□□ -1.18
COPB2-204ENST00000504295 CCDC30Q5VVM6 783 aa7.7□□□□□ -1.18
COPB2-204ENST00000504295 ZNF772Q68DY9 489 aaPredicted RBP7.7□□□□□ -1.18
COPB2-204ENST00000504295 MCTP1Q6DN14 999 aa7.7□□□□□ -1.18
COPB2-204ENST00000504295 GPR108Q9NPR9 543 aa7.7□□□□□ -1.18
COPB2-204ENST00000504295 TPCN1Q9ULQ1 816 aa7.7□□□□□ -1.18
COPB2-204ENST00000504295 CAVIN1Q6NZI2 390 aaKnown RBP7.7□□□□□ -1.18
COPB2-204ENST00000504295 TMEM139Q8IV31 216 aa7.7□□□□□ -1.18
COPB2-204ENST00000504295 MSL3Q8N5Y2 521 aaKnown RBP7.7□□□□□ -1.18
COPB2-204ENST00000504295 KCNH5Q8NCM2 988 aa7.7□□□□□ -1.18
COPB2-204ENST00000504295 LRRFIP2Q9Y608 721 aaKnown RBP7.7□□□□□ -1.18
COPB2-204ENST00000504295 CCZ1BP86790 482 aa7.7□□□□□ -1.18
COPB2-204ENST00000504295 CCZ1P86791 482 aaPredicted RBP7.7□□□□□ -1.18
COPB2-204ENST00000504295 NKX1-1Q15270 411 aaPredicted RBP7.7□□□□□ -1.18
COPB2-204ENST00000504295 TTC6Q86TZ1 520 aa7.7□□□□□ -1.18
COPB2-204ENST00000504295 DHX40Q8IX18 779 aaKnown RBP7.7□□□□□ -1.18
COPB2-204ENST00000504295 SH2B1Q9NRF2 756 aaPredicted RBP7.7□□□□□ -1.18
COPB2-204ENST00000504295 SYCE3A1L190 88 aa7.69□□□□□ -1.18
COPB2-204ENST00000504295 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.69□□□□□ -1.18
COPB2-204ENST00000504295 ABTB2Q8N961 1025 aa7.69□□□□□ -1.18
COPB2-204ENST00000504295 OSBPL5Q9H0X9 879 aaPredicted RBP7.69□□□□□ -1.18
COPB2-204ENST00000504295 ZNFX1Q9P2E3 1918 aaKnown RBP7.69□□□□□ -1.18
COPB2-204ENST00000504295 BAZ2AQ9UIF9 1905 aaKnown RBP7.69□□□□□ -1.18
COPB2-204ENST00000504295 F6X3S4 739 aa7.69□□□□□ -1.18
COPB2-204ENST00000504295 PHAXQ9H814 394 aaKnown RBP7.69□□□□□ -1.18
COPB2-204ENST00000504295 ARID5BQ14865 1188 aa7.69□□□□□ -1.18
COPB2-204ENST00000504295 NBPF6Q5VWK0 638 aa7.69□□□□□ -1.18
COPB2-204ENST00000504295 KIF1BPQ96EK5 621 aa7.69□□□□□ -1.18
COPB2-204ENST00000504295 NBPF4Q96M43 638 aa7.69□□□□□ -1.18
COPB2-204ENST00000504295 TSPY26PQ9H489 355 aa7.69□□□□□ -1.18
COPB2-204ENST00000504295 LIMCH1Q9UPQ0 1083 aa7.69□□□□□ -1.18
COPB2-204ENST00000504295 NUTM2BA6NNL0 878 aaPredicted RBP7.68□□□□□ -1.18
COPB2-204ENST00000504295 NUTM2EB1AL46 878 aaPredicted RBP7.68□□□□□ -1.18
COPB2-204ENST00000504295 HMMRO75330 724 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 NCBP1Q09161 790 aaKnown RBP7.68□□□□□ -1.18
COPB2-204ENST00000504295 NUTM2AQ8IVF1 878 aaPredicted RBP7.68□□□□□ -1.18
COPB2-204ENST00000504295 CLSTN2Q9H4D0 955 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 PYCARDQ9ULZ3 195 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 DOCK5Q9H7D0 1870 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 STX6O43752 255 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 TAF5LO75529 589 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 XPCQ01831 940 aaPredicted RBP7.68□□□□□ -1.18
COPB2-204ENST00000504295 NCAPHQ15003 741 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 PPP1R42Q7Z4L9 355 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 DDX17Q92841 729 aaKnown RBP7.68□□□□□ -1.18
COPB2-204ENST00000504295 ZNF512BQ96KM6 892 aaPredicted RBP7.68□□□□□ -1.18
COPB2-204ENST00000504295 NBPF3Q9H094 633 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 CTNNA3Q9UI47 895 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 LOXHD1Q8IVV2 1947 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 SLC27A2O14975 620 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 H2AFXP16104 143 aaPredicted RBP7.68□□□□□ -1.18
COPB2-204ENST00000504295 RPS6KB1P23443 525 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 FOXO4P98177 505 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 ATP2B3Q16720 1220 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 STOX1Q6ZVD7 989 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 GTF3C6Q969F1 213 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 MRFAP1L1Q96HT8 127 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 HPSEQ9Y251 543 aa7.68□□□□□ -1.18
COPB2-204ENST00000504295 DDX49Q9Y6V7 483 aaKnown RBP7.68□□□□□ -1.18
COPB2-204ENST00000504295 RNMTO43148 476 aaKnown RBP7.67□□□□□ -1.18
COPB2-204ENST00000504295 PRPF40AO75400 957 aaKnown RBP7.67□□□□□ -1.18
COPB2-204ENST00000504295 NLRP6P59044 892 aa7.67□□□□□ -1.18
COPB2-204ENST00000504295 RCOR1Q9UKL0 485 aa7.67□□□□□ -1.18
COPB2-204ENST00000504295 WDR81Q562E7 1941 aa7.67□□□□□ -1.18
COPB2-204ENST00000504295 ARID2Q68CP9 1835 aa7.67□□□□□ -1.18
COPB2-204ENST00000504295 ATP5JP18859 108 aa7.67□□□□□ -1.18
COPB2-204ENST00000504295 NT5DC1Q5TFE4 455 aa7.67□□□□□ -1.18
COPB2-204ENST00000504295 ATG9AQ7Z3C6 839 aa7.67□□□□□ -1.18
COPB2-204ENST00000504295 SPATA20Q8TB22 786 aa7.67□□□□□ -1.18
COPB2-204ENST00000504295 NGLY1Q96IV0 654 aa7.67□□□□□ -1.18
COPB2-204ENST00000504295 ZSCAN31Q96LW9 406 aaPredicted RBP7.67□□□□□ -1.18
COPB2-204ENST00000504295 LLPHQ9BRT6 129 aaKnown RBP7.67□□□□□ -1.18
COPB2-204ENST00000504295 PLA2G12BQ9BX93 195 aa7.67□□□□□ -1.18
COPB2-204ENST00000504295 ZMYND15Q9H091 742 aa7.67□□□□□ -1.18
COPB2-204ENST00000504295 CNPY2Q9Y2B0 182 aa7.67□□□□□ -1.18
COPB2-204ENST00000504295 ANKRD31Q8N7Z5 1873 aa7.67□□□□□ -1.18
COPB2-204ENST00000504295 TULP2O00295 520 aa7.66□□□□□ -1.18
COPB2-204ENST00000504295 ZRANB2O95218 330 aaKnown RBP eCLIP7.66□□□□□ -1.18
COPB2-204ENST00000504295 SLC20A2Q08357 652 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms