RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 ABI2Q9NYB9 513 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P3-201ENST00000502802 SOS2Q07890 1332 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P3-201ENST00000502802 EREGO14944 169 aa8.17□□□□□ -1.1
HMGB1P3-201ENST00000502802 POLR3DP05423 398 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P3-201ENST00000502802 NLRP8Q86W28 1048 aa8.17□□□□□ -1.1
HMGB1P3-201ENST00000502802 ZNF654Q8IZM8 581 aa8.17□□□□□ -1.1
HMGB1P3-201ENST00000502802 PGBD3Q8N328 593 aa8.17□□□□□ -1.1
HMGB1P3-201ENST00000502802 C1orf127Q8N9H9 656 aa8.17□□□□□ -1.1
HMGB1P3-201ENST00000502802 RUBCNLQ9H714 662 aa8.17□□□□□ -1.1
HMGB1P3-201ENST00000502802 GPAMQ9HCL2 828 aa8.17□□□□□ -1.1
HMGB1P3-201ENST00000502802 BRD7Q9NPI1 651 aa8.17□□□□□ -1.1
HMGB1P3-201ENST00000502802 CNTN3Q9P232 1028 aa8.17□□□□□ -1.1
HMGB1P3-201ENST00000502802 DDX41Q9UJV9 622 aaKnown RBP8.17□□□□□ -1.1
HMGB1P3-201ENST00000502802 DYRK1BQ9Y463 629 aa8.17□□□□□ -1.1
HMGB1P3-201ENST00000502802 GADD45BO75293 160 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P3-201ENST00000502802 F11P03951 625 aa8.16□□□□□ -1.1
HMGB1P3-201ENST00000502802 USP17L7P0C7H9 530 aa8.16□□□□□ -1.1
HMGB1P3-201ENST00000502802 ST13P50502 369 aaKnown RBP8.16□□□□□ -1.1
HMGB1P3-201ENST00000502802 ZNF394Q53GI3 561 aa8.16□□□□□ -1.1
HMGB1P3-201ENST00000502802 SAMD5Q5TGI4 173 aa8.16□□□□□ -1.1
HMGB1P3-201ENST00000502802 TTC39BQ5VTQ0 682 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P3-201ENST00000502802 NXPE4Q6UWF7 544 aa8.16□□□□□ -1.1
HMGB1P3-201ENST00000502802 USP48Q86UV5 1035 aa8.16□□□□□ -1.1
HMGB1P3-201ENST00000502802 BCO2Q9BYV7 579 aa8.16□□□□□ -1.1
HMGB1P3-201ENST00000502802 AVPP01185 164 aa8.15□□□□□ -1.1
HMGB1P3-201ENST00000502802 TNNI2P48788 182 aa8.15□□□□□ -1.1
HMGB1P3-201ENST00000502802 RACK1P63244 317 aaKnown RBP8.15□□□□□ -1.1
HMGB1P3-201ENST00000502802 MEI1Q5TIA1 1274 aa8.15□□□□□ -1.1
HMGB1P3-201ENST00000502802 ZCCHC2Q9C0B9 1178 aaKnown RBP8.15□□□□□ -1.1
HMGB1P3-201ENST00000502802 SUV39H2Q9H5I1 410 aa8.15□□□□□ -1.1
HMGB1P3-201ENST00000502802 PRKAG2Q9UGJ0 569 aa8.15□□□□□ -1.1
HMGB1P3-201ENST00000502802 GGT7Q9UJ14 662 aa8.15□□□□□ -1.1
HMGB1P3-201ENST00000502802 CES1P23141 567 aa8.14□□□□□ -1.11
HMGB1P3-201ENST00000502802 GAS2L1Q99501 681 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P3-201ENST00000502802 SRA1Q9HD15 236 aaKnown RBP8.14□□□□□ -1.11
HMGB1P3-201ENST00000502802 PDZRN3Q9UPQ7 1066 aa8.14□□□□□ -1.11
HMGB1P3-201ENST00000502802 INPP5FQ9Y2H2 1132 aa8.14□□□□□ -1.11
HMGB1P3-201ENST00000502802 PCDHGB7Q9Y5F8 929 aa8.14□□□□□ -1.11
HMGB1P3-201ENST00000502802 FAM187AA6NFU0 413 aa8.13□□□□□ -1.11
HMGB1P3-201ENST00000502802 BMP1P13497 986 aa8.13□□□□□ -1.11
HMGB1P3-201ENST00000502802 VEGFBP49765 207 aa8.13□□□□□ -1.11
HMGB1P3-201ENST00000502802 KCNQ4P56696 695 aa8.13□□□□□ -1.11
HMGB1P3-201ENST00000502802 EFHC2Q5JST6 749 aa8.13□□□□□ -1.11
HMGB1P3-201ENST00000502802 KIAA0319Q5VV43 1072 aa8.13□□□□□ -1.11
HMGB1P3-201ENST00000502802 TRIM46Q7Z4K8 759 aa8.13□□□□□ -1.11
HMGB1P3-201ENST00000502802 GMLQ99445 158 aa8.13□□□□□ -1.11
HMGB1P3-201ENST00000502802 PPP4R2Q9NY27 417 aa8.13□□□□□ -1.11
HMGB1P3-201ENST00000502802 KCNH4Q9UQ05 1017 aa8.13□□□□□ -1.11
HMGB1P3-201ENST00000502802 ATP2B1P20020 1258 aa8.12□□□□□ -1.11
HMGB1P3-201ENST00000502802 GSTT1P30711 240 aa8.12□□□□□ -1.11
HMGB1P3-201ENST00000502802 GRM2Q14416 872 aa8.12□□□□□ -1.11
HMGB1P3-201ENST00000502802 LBRQ14739 615 aaKnown RBP8.12□□□□□ -1.11
HMGB1P3-201ENST00000502802 ZFP42Q96MM3 310 aa8.12□□□□□ -1.11
HMGB1P3-201ENST00000502802 DNMT3LQ9UJW3 386 aa8.12□□□□□ -1.11
HMGB1P3-201ENST00000502802 POTECB2RU33 542 aa8.11□□□□□ -1.11
HMGB1P3-201ENST00000502802 SASH3O75995 380 aa8.11□□□□□ -1.11
HMGB1P3-201ENST00000502802 DNAJA1P31689 397 aaKnown RBP8.11□□□□□ -1.11
HMGB1P3-201ENST00000502802 SMCPP49901 116 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P3-201ENST00000502802 CCINQ13939 588 aa8.11□□□□□ -1.11
HMGB1P3-201ENST00000502802 CTC1Q2NKJ3 1217 aa8.11□□□□□ -1.11
HMGB1P3-201ENST00000502802 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.11□□□□□ -1.11
HMGB1P3-201ENST00000502802 FIGNL1Q6PIW4 674 aa8.11□□□□□ -1.11
HMGB1P3-201ENST00000502802 TRAK1Q9UPV9 953 aa8.11□□□□□ -1.11
HMGB1P3-201ENST00000502802 CYP2E1P05181 493 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P3-201ENST00000502802 FAM157BP0CG42 384 aa8.1□□□□□ -1.11
HMGB1P3-201ENST00000502802 EDN3P14138 238 aa8.1□□□□□ -1.11
HMGB1P3-201ENST00000502802 ARID5AQ03989 594 aa8.1□□□□□ -1.11
HMGB1P3-201ENST00000502802 ERMP1Q7Z2K6 904 aa8.1□□□□□ -1.11
HMGB1P3-201ENST00000502802 VPS37DQ86XT2 251 aa8.1□□□□□ -1.11
HMGB1P3-201ENST00000502802 ARMC5Q96C12 935 aa8.1□□□□□ -1.11
HMGB1P3-201ENST00000502802 GSX2Q9BZM3 304 aa8.1□□□□□ -1.11
HMGB1P3-201ENST00000502802 EHD4Q9H223 541 aa8.1□□□□□ -1.11
HMGB1P3-201ENST00000502802 A0A1W2PP55 124 aa8.09□□□□□ -1.11
HMGB1P3-201ENST00000502802 PHF20L1A8MW92 1017 aa8.09□□□□□ -1.11
HMGB1P3-201ENST00000502802 ATXN7O15265 892 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P3-201ENST00000502802 TARSP26639 723 aaKnown RBP8.09□□□□□ -1.11
HMGB1P3-201ENST00000502802 SFSWAPQ12872 951 aaKnown RBP8.09□□□□□ -1.11
HMGB1P3-201ENST00000502802 KRT25Q7Z3Z0 450 aa8.09□□□□□ -1.11
HMGB1P3-201ENST00000502802 FAM177A1Q8N128 213 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P3-201ENST00000502802 GLIS3Q8NEA6 775 aa8.09□□□□□ -1.11
HMGB1P3-201ENST00000502802 OR13H1Q8NG92 308 aa8.09□□□□□ -1.11
HMGB1P3-201ENST00000502802 KANSL3Q9P2N6 904 aa8.09□□□□□ -1.11
HMGB1P3-201ENST00000502802 PCDHGC4Q9Y5F7 938 aa8.09□□□□□ -1.11
HMGB1P3-201ENST00000502802 SENP3-EIF4A1A0A087X0R7 540 aa8.08□□□□□ -1.12
HMGB1P3-201ENST00000502802 EFSO43281 561 aa8.08□□□□□ -1.12
HMGB1P3-201ENST00000502802 MMP20O60882 483 aa8.08□□□□□ -1.12
HMGB1P3-201ENST00000502802 GTF2F1P35269 517 aaKnown RBP eCLIP8.08□□□□□ -1.12
HMGB1P3-201ENST00000502802 DHX38Q92620 1227 aaKnown RBP8.08□□□□□ -1.12
HMGB1P3-201ENST00000502802 NOC4LQ9BVI4 516 aaKnown RBP8.08□□□□□ -1.12
HMGB1P3-201ENST00000502802 LATS2Q9NRM7 1088 aa8.08□□□□□ -1.12
HMGB1P3-201ENST00000502802 SALL4Q9UJQ4 1053 aa8.08□□□□□ -1.12
HMGB1P3-201ENST00000502802 TTF2Q9UNY4 1162 aaKnown RBP8.08□□□□□ -1.12
HMGB1P3-201ENST00000502802 KHNYNO15037 678 aaKnown RBP8.07□□□□□ -1.12
HMGB1P3-201ENST00000502802 RARAP10276 462 aa8.07□□□□□ -1.12
HMGB1P3-201ENST00000502802 LAMC2Q13753 1193 aa8.07□□□□□ -1.12
HMGB1P3-201ENST00000502802 PEAR1Q5VY43 1037 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P3-201ENST00000502802 DPH6Q7L8W6 267 aa8.07□□□□□ -1.12
HMGB1P3-201ENST00000502802 DNAJC2Q99543 621 aaKnown RBP8.07□□□□□ -1.12
HMGB1P3-201ENST00000502802 COPRSQ9NQ92 184 aa8.07□□□□□ -1.12
HMGB1P3-201ENST00000502802 CUEDC1Q9NWM3 386 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms