RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 ERFEQ4G0M1 354 aa25.25■■□□□ 1.63
CTSD-206ENST00000497544 TMEM57Q8N5G2 664 aa25.25■■□□□ 1.63
CTSD-206ENST00000497544 PANK1Q8TE04 598 aa25.25■■□□□ 1.63
CTSD-206ENST00000497544 JARID2Q92833 1246 aaPredicted RBP25.25■■□□□ 1.63
CTSD-206ENST00000497544 ABHD8Q96I13 439 aa25.25■■□□□ 1.63
CTSD-206ENST00000497544 TIAM2Q8IVF5 1701 aa25.25■■□□□ 1.63
CTSD-206ENST00000497544 PIM2Q9P1W9 311 aa25.24■■□□□ 1.63
CTSD-206ENST00000497544 H7C1W4 665 aa25.23■■□□□ 1.63
CTSD-206ENST00000497544 GRM8O00222 908 aa25.23■■□□□ 1.63
CTSD-206ENST00000497544 RLBP1P12271 317 aa25.23■■□□□ 1.63
CTSD-206ENST00000497544 HSP90B1P14625 803 aaKnown RBP25.23■■□□□ 1.63
CTSD-206ENST00000497544 SYNE4Q8N205 404 aa25.23■■□□□ 1.63
CTSD-206ENST00000497544 CCDC88AQ3V6T2 1871 aa25.22■■□□□ 1.63
CTSD-206ENST00000497544 CTCFP49711 727 aaPredicted RBP25.22■■□□□ 1.63
CTSD-206ENST00000497544 SLC10A5Q5PT55 438 aa25.22■■□□□ 1.63
CTSD-206ENST00000497544 UBE3BQ7Z3V4 1068 aa25.22■■□□□ 1.63
CTSD-206ENST00000497544 ITPRIPQ8IWB1 547 aa25.22■■□□□ 1.63
CTSD-206ENST00000497544 NRXN2Q9P2S2 1712 aa25.22■■□□□ 1.63
CTSD-206ENST00000497544 ZC3H4Q9UPT8 1303 aaKnown RBP25.21■■□□□ 1.63
CTSD-206ENST00000497544 IRS4O14654 1257 aaPredicted RBP25.21■■□□□ 1.63
CTSD-206ENST00000497544 MLLT1Q03111 559 aaPredicted RBP25.21■■□□□ 1.63
CTSD-206ENST00000497544 DALRD3Q5D0E6 543 aaKnown RBP25.21■■□□□ 1.63
CTSD-206ENST00000497544 BRIP1Q9BX63 1249 aa25.21■■□□□ 1.63
CTSD-206ENST00000497544 CREBZFQ9NS37 354 aa25.21■■□□□ 1.63
CTSD-206ENST00000497544 HCLS1P14317 486 aaPredicted RBP25.2■■□□□ 1.62
CTSD-206ENST00000497544 USP44Q9H0E7 712 aa25.2■■□□□ 1.62
CTSD-206ENST00000497544 GLTPD2A6NH11 291 aa25.19■■□□□ 1.62
CTSD-206ENST00000497544 PDE6BP35913 854 aa25.19■■□□□ 1.62
CTSD-206ENST00000497544 NLRP3Q96P20 1036 aa25.19■■□□□ 1.62
CTSD-206ENST00000497544 COG6Q9Y2V7 657 aa25.19■■□□□ 1.62
CTSD-206ENST00000497544 CDHR2Q9BYE9 1310 aa25.18■■□□□ 1.62
CTSD-206ENST00000497544 RASSF7Q02833 373 aa25.18■■□□□ 1.62
CTSD-206ENST00000497544 C20orf194Q5TEA3 1177 aa25.18■■□□□ 1.62
CTSD-206ENST00000497544 HDAC5Q9UQL6 1122 aa25.18■■□□□ 1.62
CTSD-206ENST00000497544 PDE8AO60658 829 aa25.17■■□□□ 1.62
CTSD-206ENST00000497544 NBPF7P0C2Y1 421 aaPredicted RBP25.17■■□□□ 1.62
CTSD-206ENST00000497544 MVPQ14764 893 aaKnown RBP25.17■■□□□ 1.62
CTSD-206ENST00000497544 CNTNAP1P78357 1384 aa25.17■■□□□ 1.62
CTSD-206ENST00000497544 ABCC12Q96J65 1359 aa25.17■■□□□ 1.62
CTSD-206ENST00000497544 UTYO14607 1347 aa25.16■■□□□ 1.62
CTSD-206ENST00000497544 GNAI3P08754 354 aa25.16■■□□□ 1.62
CTSD-206ENST00000497544 UBTFL1P0CB47 393 aaPredicted RBP25.16■■□□□ 1.62
CTSD-206ENST00000497544 LBX1P52954 281 aa25.16■■□□□ 1.62
CTSD-206ENST00000497544 CASP7P55210 303 aa25.16■■□□□ 1.62
CTSD-206ENST00000497544 AIDAQ96BJ3 306 aa25.16■■□□□ 1.62
CTSD-206ENST00000497544 MEIS3Q99687 375 aa25.15■■□□□ 1.62
CTSD-206ENST00000497544 DDX19BQ9UMR2 479 aa25.15■■□□□ 1.62
CTSD-206ENST00000497544 PDZRN3Q9UPQ7 1066 aa25.15■■□□□ 1.62
CTSD-206ENST00000497544 POTECB2RU33 542 aa25.14■■□□□ 1.62
CTSD-206ENST00000497544 H0YIN7 160 aa25.14■■□□□ 1.62
CTSD-206ENST00000497544 RGS19P49795 217 aa25.14■■□□□ 1.62
CTSD-206ENST00000497544 CHMP4BQ9H444 224 aaKnown RBP25.14■■□□□ 1.62
CTSD-206ENST00000497544 ZBTB7BO15156 539 aaPredicted RBP25.13■■□□□ 1.61
CTSD-206ENST00000497544 C2CD5Q86YS7 1000 aa25.13■■□□□ 1.61
CTSD-206ENST00000497544 PLA2G12BQ9BX93 195 aa25.13■■□□□ 1.61
CTSD-206ENST00000497544 CHRNA5P30532 468 aa25.12■■□□□ 1.61
CTSD-206ENST00000497544 SUCLG2Q96I99 432 aa25.12■■□□□ 1.61
CTSD-206ENST00000497544 ANKRD31Q8N7Z5 1873 aa25.12■■□□□ 1.61
CTSD-206ENST00000497544 SF3B3Q15393 1217 aaKnown RBP25.11■■□□□ 1.61
CTSD-206ENST00000497544 RIC1Q4ADV7 1423 aa25.11■■□□□ 1.61
CTSD-206ENST00000497544 KLRG2A4D1S0 409 aaPredicted RBP25.1■■□□□ 1.61
CTSD-206ENST00000497544 C3orf67Q6ZVT6 689 aa25.1■■□□□ 1.61
CTSD-206ENST00000497544 RPGRQ92834 1020 aaKnown RBP25.1■■□□□ 1.61
CTSD-206ENST00000497544 DDX60Q8IY21 1712 aaKnown RBP25.09■■□□□ 1.61
CTSD-206ENST00000497544 GNAI2P04899 355 aa25.09■■□□□ 1.61
CTSD-206ENST00000497544 LMNB1P20700 586 aa25.09■■□□□ 1.61
CTSD-206ENST00000497544 CTSWP56202 376 aa25.09■■□□□ 1.61
CTSD-206ENST00000497544 CCDC152Q4G0S7 254 aa25.09■■□□□ 1.61
CTSD-206ENST00000497544 ZNF622Q969S3 477 aaKnown RBP eCLIP25.09■■□□□ 1.61
CTSD-206ENST00000497544 WBP1LQ9NX94 342 aa25.09■■□□□ 1.61
CTSD-206ENST00000497544 TNRC18O15417 2968 aaPredicted RBP25.08■■□□□ 1.61
CTSD-206ENST00000497544 SRGNP10124 158 aa25.08■■□□□ 1.61
CTSD-206ENST00000497544 NPR1P16066 1061 aa25.08■■□□□ 1.61
CTSD-206ENST00000497544 FOXO4P98177 505 aa25.08■■□□□ 1.61
CTSD-206ENST00000497544 CRY2Q49AN0 593 aa25.08■■□□□ 1.61
CTSD-206ENST00000497544 TTLL11Q8NHH1 800 aa25.08■■□□□ 1.61
CTSD-206ENST00000497544 MASTLQ96GX5 879 aa25.08■■□□□ 1.61
CTSD-206ENST00000497544 RBM17Q96I25 401 aaKnown RBP25.08■■□□□ 1.61
CTSD-206ENST00000497544 LRRFIP2Q9Y608 721 aaKnown RBP25.08■■□□□ 1.61
CTSD-206ENST00000497544 MYH3P11055 1940 aa25.08■■□□□ 1.6
CTSD-206ENST00000497544 CCDC85CA6NKD9 419 aa25.07■■□□□ 1.6
CTSD-206ENST00000497544 EPHA10Q5JZY3 1008 aa25.07■■□□□ 1.6
CTSD-206ENST00000497544 LMBR1LQ6UX01 489 aa25.07■■□□□ 1.6
CTSD-206ENST00000497544 DDX46Q7L014 1031 aaKnown RBP25.07■■□□□ 1.6
CTSD-206ENST00000497544 KAZALD1Q96I82 304 aa25.07■■□□□ 1.6
CTSD-206ENST00000497544 CCDC85AQ96PX6 553 aaPredicted RBP25.07■■□□□ 1.6
CTSD-206ENST00000497544 CRBNQ96SW2 442 aa25.07■■□□□ 1.6
CTSD-206ENST00000497544 BICC1Q9H694 974 aaKnown RBP25.07■■□□□ 1.6
CTSD-206ENST00000497544 CHMP3Q9Y3E7 222 aa25.07■■□□□ 1.6
CTSD-206ENST00000497544 LAMB2P55268 1798 aa25.06■■□□□ 1.6
CTSD-206ENST00000497544 CSF1RP07333 972 aa25.06■■□□□ 1.6
CTSD-206ENST00000497544 HSPA8P11142 646 aaKnown RBP25.06■■□□□ 1.6
CTSD-206ENST00000497544 VEGFBP49765 207 aa25.06■■□□□ 1.6
CTSD-206ENST00000497544 STYK1Q6J9G0 422 aa25.06■■□□□ 1.6
CTSD-206ENST00000497544 CHADLQ6NUI6 762 aa25.06■■□□□ 1.6
CTSD-206ENST00000497544 DLEC1Q9Y238 1755 aa25.05■■□□□ 1.6
CTSD-206ENST00000497544 ALDH1B1P30837 517 aa25.04■■□□□ 1.6
CTSD-206ENST00000497544 CNKSR1Q969H4 720 aa25.04■■□□□ 1.6
CTSD-206ENST00000497544 POTEIP0CG38 1075 aa25.03■■□□□ 1.6
CTSD-206ENST00000497544 POTEJP0CG39 1038 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms