RNA–Protein interactions for RNA: ENST00000497483.1

HDAC10-219, Transcript of histone deacetylase 10, human

TSL 2

Gene HDAC10, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC10-219	ENST00000497483	TAF1D	Q9H5J8	278 aa	Predicted RBP	31.94	■■■□□ 2.7
HDAC10-219	ENST00000497483	MYD88	Q99836	296 aa		31.93	■■■□□ 2.7
HDAC10-219	ENST00000497483	METTL22	Q9BUU2	404 aa	Predicted RBP	31.93	■■■□□ 2.7
HDAC10-219	ENST00000497483	STK31	Q9BXU1	1019 aa		31.93	■■■□□ 2.7
HDAC10-219	ENST00000497483	COL4A1	P02462	1669 aa		31.92	■■■□□ 2.7
HDAC10-219	ENST00000497483	LTBP1	Q14766	1721 aa		31.92	■■■□□ 2.7
HDAC10-219	ENST00000497483	IRS4	O14654	1257 aa	Predicted RBP	31.92	■■■□□ 2.7
HDAC10-219	ENST00000497483	EIF6	P56537	245 aa	Known RBP	31.92	■■■□□ 2.7
HDAC10-219	ENST00000497483	CHADL	Q6NUI6	762 aa		31.92	■■■□□ 2.7
HDAC10-219	ENST00000497483	HACL1	Q9UJ83	578 aa		31.92	■■■□□ 2.7
HDAC10-219	ENST00000497483	FANCI	Q9NVI1	1328 aa		31.92	■■■□□ 2.7
HDAC10-219	ENST00000497483	MYH3	P11055	1940 aa		31.91	■■■□□ 2.7
HDAC10-219	ENST00000497483	PPIP5K2	O43314	1243 aa		31.91	■■■□□ 2.7
HDAC10-219	ENST00000497483	HSP90B1	P14625	803 aa	Known RBP	31.91	■■■□□ 2.7
HDAC10-219	ENST00000497483	DPP8	Q6V1X1	898 aa	Predicted RBP	31.91	■■■□□ 2.7
HDAC10-219	ENST00000497483	NIM1K	Q8IY84	436 aa		31.91	■■■□□ 2.7
HDAC10-219	ENST00000497483	POTEI	P0CG38	1075 aa		31.9	■■■□□ 2.7
HDAC10-219	ENST00000497483	POTEJ	P0CG39	1038 aa		31.9	■■■□□ 2.7
HDAC10-219	ENST00000497483	LDHD	Q86WU2	507 aa		31.9	■■■□□ 2.7
HDAC10-219	ENST00000497483	MPND	Q8N594	471 aa		31.9	■■■□□ 2.7
HDAC10-219	ENST00000497483	PCCA	P05165	728 aa	Predicted RBP	31.89	■■■□□ 2.7
HDAC10-219	ENST00000497483	AOC3	Q16853	763 aa		31.89	■■■□□ 2.7
HDAC10-219	ENST00000497483	RTL5	Q5HYW3	569 aa	Predicted RBP	31.89	■■■□□ 2.7
HDAC10-219	ENST00000497483	CWC25	Q9NXE8	425 aa	Predicted RBP	31.89	■■■□□ 2.7
HDAC10-219	ENST00000497483	HTRA3	P83110	453 aa		31.88	■■■□□ 2.69
HDAC10-219	ENST00000497483	KSR2	Q6VAB6	950 aa		31.88	■■■□□ 2.69
HDAC10-219	ENST00000497483	MAP3K2	Q9Y2U5	619 aa		31.88	■■■□□ 2.69
HDAC10-219	ENST00000497483	CELF1	Q92879	486 aa	Known RBP	31.87	■■■□□ 2.69
HDAC10-219	ENST00000497483	KLRG1	Q96E93	195 aa		31.87	■■■□□ 2.69
HDAC10-219	ENST00000497483	EPHX2	P34913	555 aa		31.86	■■■□□ 2.69
HDAC10-219	ENST00000497483	KIAA2012	Q0VF49	1180 aa		31.86	■■■□□ 2.69
HDAC10-219	ENST00000497483	PI4KAP2	A4QPH2	592 aa		31.85	■■■□□ 2.69
HDAC10-219	ENST00000497483	PNMA8A	Q86V59	439 aa	Predicted RBP	31.85	■■■□□ 2.69
HDAC10-219	ENST00000497483	PI4KAP1	Q8N8J0	262 aa		31.85	■■■□□ 2.69
HDAC10-219	ENST00000497483	CDHR2	Q9BYE9	1310 aa		31.84	■■■□□ 2.69
HDAC10-219	ENST00000497483	FAM9B	Q8IZU0	186 aa		31.83	■■■□□ 2.69
HDAC10-219	ENST00000497483	ZNRF3	Q9ULT6	936 aa		31.83	■■■□□ 2.69
HDAC10-219	ENST00000497483	SALL2	Q9Y467	1007 aa	Predicted RBP	31.83	■■■□□ 2.69
HDAC10-219	ENST00000497483	GJA3	Q9Y6H8	435 aa		31.83	■■■□□ 2.69
HDAC10-219	ENST00000497483	PDE8A	O60658	829 aa		31.82	■■■□□ 2.68
HDAC10-219	ENST00000497483	SLC4A2	P04920	1241 aa		31.82	■■■□□ 2.68
HDAC10-219	ENST00000497483	IGKV5-2	P06315	115 aa		31.82	■■■□□ 2.68
HDAC10-219	ENST00000497483	SCNN1D	P51172	638 aa		31.81	■■■□□ 2.68
HDAC10-219	ENST00000497483	NEXN	Q0ZGT2	675 aa		31.81	■■■□□ 2.68
HDAC10-219	ENST00000497483	G2E3	Q7L622	706 aa		31.81	■■■□□ 2.68
HDAC10-219	ENST00000497483	PASK	Q96RG2	1323 aa		31.8	■■■□□ 2.68
HDAC10-219	ENST00000497483	LMOD1	P29536	600 aa	Predicted RBP	31.8	■■■□□ 2.68
HDAC10-219	ENST00000497483	EAPP	Q56P03	285 aa	Predicted RBP	31.8	■■■□□ 2.68
HDAC10-219	ENST00000497483	JMY	Q8N9B5	988 aa		31.8	■■■□□ 2.68
HDAC10-219	ENST00000497483	VAMP4	O75379	141 aa		31.79	■■■□□ 2.68
HDAC10-219	ENST00000497483	RPS8	P62241	208 aa	Known RBP	31.79	■■■□□ 2.68
HDAC10-219	ENST00000497483	FLII	Q13045	1269 aa		31.79	■■■□□ 2.68
HDAC10-219	ENST00000497483	CCDC152	Q4G0S7	254 aa		31.79	■■■□□ 2.68
HDAC10-219	ENST00000497483	NEURL1B	A8MQ27	555 aa		31.77	■■■□□ 2.68
HDAC10-219	ENST00000497483	EXOSC9	Q06265	439 aa	Known RBP	31.77	■■■□□ 2.68
HDAC10-219	ENST00000497483	CXCL9	Q07325	125 aa		31.77	■■■□□ 2.68
HDAC10-219	ENST00000497483	MYH16	Q9H6N6	1097 aa		31.77	■■■□□ 2.68
HDAC10-219	ENST00000497483	SPINK5	Q9NQ38	1064 aa	Predicted RBP	31.77	■■■□□ 2.68
HDAC10-219	ENST00000497483	CREBZF	Q9NS37	354 aa		31.76	■■■□□ 2.67
HDAC10-219	ENST00000497483	NSFL1C	Q9UNZ2	370 aa	Known RBP	31.76	■■■□□ 2.67
HDAC10-219	ENST00000497483	SPEF2	Q9C093	1822 aa		31.75	■■■□□ 2.67
HDAC10-219	ENST00000497483	ITGBL1	O95965	494 aa	Predicted RBP	31.75	■■■□□ 2.67
HDAC10-219	ENST00000497483	SEC31B	Q9NQW1	1179 aa		31.75	■■■□□ 2.67
HDAC10-219	ENST00000497483	GPSM2	P81274	684 aa		31.74	■■■□□ 2.67
HDAC10-219	ENST00000497483	CWF19L2	Q2TBE0	894 aa	Known RBP	31.74	■■■□□ 2.67
HDAC10-219	ENST00000497483	PODXL2	Q9NZ53	605 aa		31.74	■■■□□ 2.67
HDAC10-219	ENST00000497483	ZNF521	Q96K83	1311 aa		31.74	■■■□□ 2.67
HDAC10-219	ENST00000497483	EPS15	P42566	896 aa		31.73	■■■□□ 2.67
HDAC10-219	ENST00000497483	CTSW	P56202	376 aa		31.73	■■■□□ 2.67
HDAC10-219	ENST00000497483	WASHC4	Q2M389	1173 aa		31.73	■■■□□ 2.67
HDAC10-219	ENST00000497483	CIAPIN1	Q6FI81	312 aa		31.73	■■■□□ 2.67
HDAC10-219	ENST00000497483	JARID2	Q92833	1246 aa	Predicted RBP	31.73	■■■□□ 2.67
HDAC10-219	ENST00000497483	GPRC5D	Q9NZD1	345 aa		31.73	■■■□□ 2.67
HDAC10-219	ENST00000497483	CLEC11A	Q9Y240	323 aa		31.73	■■■□□ 2.67
HDAC10-219	ENST00000497483	RTL9	Q8NET4	1388 aa		31.72	■■■□□ 2.67
HDAC10-219	ENST00000497483	FKBP5	Q13451	457 aa	Predicted RBP	31.72	■■■□□ 2.67
HDAC10-219	ENST00000497483	POLL	Q9UGP5	575 aa		31.72	■■■□□ 2.67
HDAC10-219	ENST00000497483	YDJC	A8MPS7	323 aa		31.71	■■■□□ 2.67
HDAC10-219	ENST00000497483	USP50	Q70EL3	339 aa	Predicted RBP	31.71	■■■□□ 2.67
HDAC10-219	ENST00000497483	DNAAF4	Q8WXU2	420 aa		31.71	■■■□□ 2.67
HDAC10-219	ENST00000497483	EYA3	Q99504	573 aa		31.71	■■■□□ 2.67
HDAC10-219	ENST00000497483	TNIP1	Q15025	636 aa		31.7	■■■□□ 2.67
HDAC10-219	ENST00000497483	PSME4	Q14997	1843 aa		31.7	■■■□□ 2.66
HDAC10-219	ENST00000497483	C6orf229	H3BNL8	230 aa		31.69	■■■□□ 2.66
HDAC10-219	ENST00000497483		H7C1W4	665 aa		31.69	■■■□□ 2.66
HDAC10-219	ENST00000497483	TBC1D16	Q8TBP0	767 aa		31.69	■■■□□ 2.66
HDAC10-219	ENST00000497483	ADARB2	Q9NS39	739 aa	Known RBP	31.69	■■■□□ 2.66
HDAC10-219	ENST00000497483	TRPM7	Q96QT4	1865 aa		31.68	■■■□□ 2.66
HDAC10-219	ENST00000497483	GMPS	P49915	693 aa	Predicted RBP	31.68	■■■□□ 2.66
HDAC10-219	ENST00000497483	GCKR	Q14397	625 aa		31.68	■■■□□ 2.66
HDAC10-219	ENST00000497483	MAP1S	Q66K74	1059 aa	Predicted RBP	31.68	■■■□□ 2.66
HDAC10-219	ENST00000497483	ANKRD18A	Q8IVF6	992 aa		31.68	■■■□□ 2.66
HDAC10-219	ENST00000497483	CNTROB	Q8N137	903 aa		31.68	■■■□□ 2.66
HDAC10-219	ENST00000497483	LINS1	Q8NG48	757 aa		31.68	■■■□□ 2.66
HDAC10-219	ENST00000497483	TTLL11	Q8NHH1	800 aa		31.68	■■■□□ 2.66
HDAC10-219	ENST00000497483	SCN9A	Q15858	1988 aa		31.68	■■■□□ 2.66
HDAC10-219	ENST00000497483	RAD17	O75943	681 aa		31.67	■■■□□ 2.66
HDAC10-219	ENST00000497483	UBE3B	Q7Z3V4	1068 aa		31.67	■■■□□ 2.66
HDAC10-219	ENST00000497483	CCDC85A	Q96PX6	553 aa	Predicted RBP	31.67	■■■□□ 2.66
HDAC10-219	ENST00000497483	CDC5L	Q99459	802 aa	Known RBP	31.67	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms