RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 TTLL6Q8N841 843 aa19.88■□□□□ 0.77
PMF1-205ENST00000497069 CNKSR1Q969H4 720 aa19.88■□□□□ 0.77
PMF1-205ENST00000497069 CHMP4BQ9H444 224 aaKnown RBP19.88■□□□□ 0.77
PMF1-205ENST00000497069 DDX19BQ9UMR2 479 aa19.88■□□□□ 0.77
PMF1-205ENST00000497069 LAMB2P55268 1798 aa19.88■□□□□ 0.77
PMF1-205ENST00000497069 DDX60Q8IY21 1712 aaKnown RBP19.88■□□□□ 0.77
PMF1-205ENST00000497069 KCNA3P22001 575 aa19.87■□□□□ 0.77
PMF1-205ENST00000497069 DALRD3Q5D0E6 543 aaKnown RBP19.87■□□□□ 0.77
PMF1-205ENST00000497069 C20orf194Q5TEA3 1177 aa19.87■□□□□ 0.77
PMF1-205ENST00000497069 PELP1Q8IZL8 1130 aaKnown RBP19.87■□□□□ 0.77
PMF1-205ENST00000497069 CCDC85AQ96PX6 553 aaPredicted RBP19.87■□□□□ 0.77
PMF1-205ENST00000497069 WWC3Q9ULE0 1092 aa19.87■□□□□ 0.77
PMF1-205ENST00000497069 CHMP3Q9Y3E7 222 aa19.87■□□□□ 0.77
PMF1-205ENST00000497069 HOXA10P31260 410 aaPredicted RBP19.86■□□□□ 0.77
PMF1-205ENST00000497069 FOXO4P98177 505 aa19.86■□□□□ 0.77
PMF1-205ENST00000497069 TTLL11Q8NHH1 800 aa19.86■□□□□ 0.77
PMF1-205ENST00000497069 CRAMP1Q96RY5 1269 aa19.86■□□□□ 0.77
PMF1-205ENST00000497069 GNAI2P04899 355 aa19.85■□□□□ 0.77
PMF1-205ENST00000497069 LMBR1LQ6UX01 489 aa19.85■□□□□ 0.77
PMF1-205ENST00000497069 BICC1Q9H694 974 aaKnown RBP19.85■□□□□ 0.77
PMF1-205ENST00000497069 BCS1LQ9Y276 419 aa19.85■□□□□ 0.77
PMF1-205ENST00000497069 COL11A2P13942 1736 aaPredicted RBP19.85■□□□□ 0.77
PMF1-205ENST00000497069 KIAA1551Q9HCM1 1747 aa19.85■□□□□ 0.77
PMF1-205ENST00000497069 DCAF8L1A6NGE4 600 aa19.84■□□□□ 0.77
PMF1-205ENST00000497069 ZBTB7BO15156 539 aaPredicted RBP19.84■□□□□ 0.77
PMF1-205ENST00000497069 CSF1RP07333 972 aa19.84■□□□□ 0.77
PMF1-205ENST00000497069 EPHA10Q5JZY3 1008 aa19.84■□□□□ 0.77
PMF1-205ENST00000497069 LRRFIP2Q9Y608 721 aaKnown RBP19.84■□□□□ 0.77
PMF1-205ENST00000497069 GRAPQ13588 217 aa19.83■□□□□ 0.77
PMF1-205ENST00000497069 PRPF40BQ6NWY9 871 aaKnown RBP19.83■□□□□ 0.77
PMF1-205ENST00000497069 GRAPLQ8TC17 118 aaPredicted RBP19.83■□□□□ 0.77
PMF1-205ENST00000497069 KAZALD1Q96I82 304 aa19.83■□□□□ 0.77
PMF1-205ENST00000497069 CDC5LQ99459 802 aaKnown RBP19.83■□□□□ 0.77
PMF1-205ENST00000497069 TMX4Q9H1E5 349 aaPredicted RBP19.83■□□□□ 0.77
PMF1-205ENST00000497069 GREM2Q9H772 168 aa19.83■□□□□ 0.77
PMF1-205ENST00000497069 ANKRD18BA2A2Z9 1011 aa19.82■□□□□ 0.76
PMF1-205ENST00000497069 ITGA6P23229 1130 aa19.82■□□□□ 0.76
PMF1-205ENST00000497069 IFIT5Q13325 482 aaKnown RBP19.82■□□□□ 0.76
PMF1-205ENST00000497069 GPR162Q16538 588 aa19.82■□□□□ 0.76
PMF1-205ENST00000497069 CCDC57Q2TAC2 916 aa19.82■□□□□ 0.76
PMF1-205ENST00000497069 SEC31BQ9NQW1 1179 aa19.82■□□□□ 0.76
PMF1-205ENST00000497069 RTL9Q8NET4 1388 aa19.82■□□□□ 0.76
PMF1-205ENST00000497069 DLEC1Q9Y238 1755 aa19.81■□□□□ 0.76
PMF1-205ENST00000497069 PPEF1O14829 653 aaPredicted RBP19.81■□□□□ 0.76
PMF1-205ENST00000497069 BBOX1O75936 387 aa19.81■□□□□ 0.76
PMF1-205ENST00000497069 FAM161AQ3B820 660 aa19.81■□□□□ 0.76
PMF1-205ENST00000497069 RABL6Q3YEC7 729 aaPredicted RBP19.81■□□□□ 0.76
PMF1-205ENST00000497069 TAF7LQ5H9L4 462 aa19.81■□□□□ 0.76
PMF1-205ENST00000497069 ANKRD18AQ8IVF6 992 aa19.81■□□□□ 0.76
PMF1-205ENST00000497069 ZNF219Q9P2Y4 722 aaPredicted RBP19.81■□□□□ 0.76
PMF1-205ENST00000497069 TMC4Q7Z404 712 aa19.8■□□□□ 0.76
PMF1-205ENST00000497069 ANKRD44Q8N8A2 993 aa19.8■□□□□ 0.76
PMF1-205ENST00000497069 IGHMBP2P38935 993 aaKnown RBP19.79■□□□□ 0.76
PMF1-205ENST00000497069 RPS8P62241 208 aaKnown RBP19.79■□□□□ 0.76
PMF1-205ENST00000497069 CELF1Q92879 486 aaKnown RBP19.79■□□□□ 0.76
PMF1-205ENST00000497069 C21orf2O43822 256 aa19.78■□□□□ 0.76
PMF1-205ENST00000497069 SOGA3Q5TF21 947 aa19.78■□□□□ 0.76
PMF1-205ENST00000497069 CRBNQ96SW2 442 aa19.78■□□□□ 0.76
PMF1-205ENST00000497069 C1orf115Q9H7X2 142 aa19.78■□□□□ 0.76
PMF1-205ENST00000497069 MYH3P11055 1940 aa19.78■□□□□ 0.76
PMF1-205ENST00000497069 GRIN3BO60391 1043 aa19.77■□□□□ 0.76
PMF1-205ENST00000497069 MPHOSPH8Q99549 860 aa19.77■□□□□ 0.76
PMF1-205ENST00000497069 ZBTB40Q9NUA8 1239 aa19.77■□□□□ 0.76
PMF1-205ENST00000497069 YBX3P16989 372 aaKnown RBP eCLIP19.76■□□□□ 0.75
PMF1-205ENST00000497069 CC2D2BQ6DHV5 1058 aa19.76■□□□□ 0.75
PMF1-205ENST00000497069 ATP6V0A2Q9Y487 856 aa19.76■□□□□ 0.75
PMF1-205ENST00000497069 SRGAP3O43295 1099 aa19.75■□□□□ 0.75
PMF1-205ENST00000497069 CCDC93Q567U6 631 aa19.75■□□□□ 0.75
PMF1-205ENST00000497069 SP8Q8IXZ3 490 aa19.75■□□□□ 0.75
PMF1-205ENST00000497069 C7orf43Q8WVR3 580 aa19.75■□□□□ 0.75
PMF1-205ENST00000497069 BRCA1P38398 1863 aaKnown RBP19.75■□□□□ 0.75
PMF1-205ENST00000497069 MTX1Q13505 466 aa19.74■□□□□ 0.75
PMF1-205ENST00000497069 GRIPAP1Q4V328 841 aa19.74■□□□□ 0.75
PMF1-205ENST00000497069 CNNM1Q9NRU3 951 aa19.74■□□□□ 0.75
PMF1-205ENST00000497069 BSDC1Q9NW68 430 aaPredicted RBP19.74■□□□□ 0.75
PMF1-205ENST00000497069 LDHAL6AQ6ZMR3 332 aa19.73■□□□□ 0.75
PMF1-205ENST00000497069 ARHGAP27Q6ZUM4 889 aa19.73■□□□□ 0.75
PMF1-205ENST00000497069 RTKN2Q8IZC4 609 aa19.73■□□□□ 0.75
PMF1-205ENST00000497069 ZNF594Q96JF6 807 aaPredicted RBP19.73■□□□□ 0.75
PMF1-205ENST00000497069 SLX4Q8IY92 1834 aa19.73■□□□□ 0.75
PMF1-205ENST00000497069 CACNA1SQ13698 1873 aa19.73■□□□□ 0.75
PMF1-205ENST00000497069 ATP8B2P98198 1209 aa19.72■□□□□ 0.75
PMF1-205ENST00000497069 OLFM4Q6UX06 510 aa19.72■□□□□ 0.75
PMF1-205ENST00000497069 IRX6P78412 446 aaPredicted RBP19.71■□□□□ 0.75
PMF1-205ENST00000497069 CEP85Q6P2H3 762 aa19.71■□□□□ 0.75
PMF1-205ENST00000497069 RPAP2Q8IXW5 612 aaPredicted RBP19.71■□□□□ 0.75
PMF1-205ENST00000497069 PNMA6EA0A0J9YXQ4 647 aa19.7■□□□□ 0.74
PMF1-205ENST00000497069 AAMPQ13685 434 aa19.7■□□□□ 0.74
PMF1-205ENST00000497069 DPP8Q6V1X1 898 aaPredicted RBP19.7■□□□□ 0.74
PMF1-205ENST00000497069 MPNDQ8N594 471 aa19.7■□□□□ 0.74
PMF1-205ENST00000497069 KLHDC4Q8TBB5 520 aa19.7■□□□□ 0.74
PMF1-205ENST00000497069 ANKIB1Q9P2G1 1089 aa19.7■□□□□ 0.74
PMF1-205ENST00000497069 NSFL1CQ9UNZ2 370 aaKnown RBP19.7■□□□□ 0.74
PMF1-205ENST00000497069 ARFGEF1Q9Y6D6 1849 aa19.69■□□□□ 0.74
PMF1-205ENST00000497069 COL4A1P02462 1669 aa19.69■□□□□ 0.74
PMF1-205ENST00000497069 HMMRO75330 724 aa19.69■□□□□ 0.74
PMF1-205ENST00000497069 RFX5P48382 616 aaPredicted RBP19.69■□□□□ 0.74
PMF1-205ENST00000497069 PTPN12Q05209 780 aaKnown RBP19.69■□□□□ 0.74
PMF1-205ENST00000497069 EXOC6Q8TAG9 804 aa19.69■□□□□ 0.74
PMF1-205ENST00000497069 ANKRD2Q9GZV1 360 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms