RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 TIMM10P62072 90 aa16.63■□□□□ 0.25
SPTBN1-205ENST00000496323 HSCBQ8IWL3 235 aa16.63■□□□□ 0.25
SPTBN1-205ENST00000496323 FBXO3Q9UK99 471 aa16.63■□□□□ 0.25
SPTBN1-205ENST00000496323 COL5A3P25940 1745 aaPredicted RBP16.63■□□□□ 0.25
SPTBN1-205ENST00000496323 NHSQ6T4R5 1651 aa16.63■□□□□ 0.25
SPTBN1-205ENST00000496323 ITGA6P23229 1130 aa16.62■□□□□ 0.25
SPTBN1-205ENST00000496323 CWC27Q6UX04 472 aaKnown RBP16.62■□□□□ 0.25
SPTBN1-205ENST00000496323 UTP14AQ9BVJ6 771 aaKnown RBP16.62■□□□□ 0.25
SPTBN1-205ENST00000496323 ANTXR1Q9H6X2 564 aa16.62■□□□□ 0.25
SPTBN1-205ENST00000496323 NIP7Q9Y221 180 aaKnown RBP eCLIP16.62■□□□□ 0.25
SPTBN1-205ENST00000496323 SH3TC1Q8TE82 1336 aa16.62■□□□□ 0.25
SPTBN1-205ENST00000496323 RABEP1Q15276 862 aa16.62■□□□□ 0.25
SPTBN1-205ENST00000496323 PARP10Q53GL7 1025 aa16.62■□□□□ 0.25
SPTBN1-205ENST00000496323 RC3H1Q5TC82 1133 aaKnown RBP16.62■□□□□ 0.25
SPTBN1-205ENST00000496323 CCNL1Q9UK58 526 aaPredicted RBP16.62■□□□□ 0.25
SPTBN1-205ENST00000496323 ANKRD36CQ5JPF3 1778 aa16.62■□□□□ 0.25
SPTBN1-205ENST00000496323 NUP98P52948 1817 aa16.61■□□□□ 0.25
SPTBN1-205ENST00000496323 FAM177BA6PVY3 158 aa16.61■□□□□ 0.25
SPTBN1-205ENST00000496323 HCLS1P14317 486 aaPredicted RBP16.61■□□□□ 0.25
SPTBN1-205ENST00000496323 EDC3Q96F86 508 aaKnown RBP16.61■□□□□ 0.25
SPTBN1-205ENST00000496323 ZNF609O15014 1411 aa16.61■□□□□ 0.25
SPTBN1-205ENST00000496323 NTSR2O95665 410 aa16.61■□□□□ 0.25
SPTBN1-205ENST00000496323 CLEC4GQ6UXB4 293 aa16.61■□□□□ 0.25
SPTBN1-205ENST00000496323 NEUROD6Q96NK8 337 aa16.61■□□□□ 0.25
SPTBN1-205ENST00000496323 SLKQ9H2G2 1235 aaPredicted RBP16.61■□□□□ 0.25
SPTBN1-205ENST00000496323 DIAPH3Q9NSV4 1193 aa16.61■□□□□ 0.25
SPTBN1-205ENST00000496323 CEP126Q9P2H0 1117 aa16.61■□□□□ 0.25
SPTBN1-205ENST00000496323 PALD1Q9ULE6 856 aa16.61■□□□□ 0.25
SPTBN1-205ENST00000496323 RIPOR2Q9Y4F9 1068 aa16.61■□□□□ 0.25
SPTBN1-205ENST00000496323 EPB41L2O43491 1005 aaKnown RBP16.6■□□□□ 0.25
SPTBN1-205ENST00000496323 TAF7LQ5H9L4 462 aa16.6■□□□□ 0.25
SPTBN1-205ENST00000496323 SPRYD3Q8NCJ5 442 aa16.6■□□□□ 0.25
SPTBN1-205ENST00000496323 AK7Q96M32 723 aa16.6■□□□□ 0.25
SPTBN1-205ENST00000496323 LSG1Q9H089 658 aaKnown RBP16.6■□□□□ 0.25
SPTBN1-205ENST00000496323 NDUFB9Q9Y6M9 179 aa16.6■□□□□ 0.25
SPTBN1-205ENST00000496323 BTAF1O14981 1849 aa16.6■□□□□ 0.25
SPTBN1-205ENST00000496323 A0A1B0GUL7 405 aa16.6■□□□□ 0.25
SPTBN1-205ENST00000496323 ANKRD18BA2A2Z9 1011 aa16.6■□□□□ 0.25
SPTBN1-205ENST00000496323 RPS6KA4O75676 772 aa16.6■□□□□ 0.25
SPTBN1-205ENST00000496323 AMIGO3Q86WK7 504 aa16.6■□□□□ 0.25
SPTBN1-205ENST00000496323 HAUS7Q99871 368 aa16.6■□□□□ 0.25
SPTBN1-205ENST00000496323 BCL11BQ9C0K0 894 aaPredicted RBP16.59■□□□□ 0.25
SPTBN1-205ENST00000496323 BCL2L12Q9HB09 334 aa16.59■□□□□ 0.25
SPTBN1-205ENST00000496323 ZNF652Q9Y2D9 606 aa16.59■□□□□ 0.25
SPTBN1-205ENST00000496323 LDHAL6AQ6ZMR3 332 aa16.58■□□□□ 0.25
SPTBN1-205ENST00000496323 IL17RAQ96F46 866 aa16.58■□□□□ 0.25
SPTBN1-205ENST00000496323 FAM227BQ96M60 508 aa16.58■□□□□ 0.25
SPTBN1-205ENST00000496323 RIC1Q4ADV7 1423 aa16.58■□□□□ 0.24
SPTBN1-205ENST00000496323 RAD50Q92878 1312 aa16.58■□□□□ 0.24
SPTBN1-205ENST00000496323 GNPATO15228 680 aa16.58■□□□□ 0.24
SPTBN1-205ENST00000496323 NBR1Q14596 966 aa16.58■□□□□ 0.24
SPTBN1-205ENST00000496323 FSD1Q9BTV5 496 aa16.58■□□□□ 0.24
SPTBN1-205ENST00000496323 HSPA4P34932 840 aa16.57■□□□□ 0.24
SPTBN1-205ENST00000496323 NMIQ13287 307 aaPredicted RBP16.57■□□□□ 0.24
SPTBN1-205ENST00000496323 RUFY2Q8WXA3 655 aa16.57■□□□□ 0.24
SPTBN1-205ENST00000496323 K7ELQ4 463 aaPredicted RBP16.57■□□□□ 0.24
SPTBN1-205ENST00000496323 ADORA1P30542 326 aa16.57■□□□□ 0.24
SPTBN1-205ENST00000496323 ANAPC15P60006 121 aa16.57■□□□□ 0.24
SPTBN1-205ENST00000496323 SNRKQ9NRH2 765 aa16.57■□□□□ 0.24
SPTBN1-205ENST00000496323 NARFQ9UHQ1 456 aa16.57■□□□□ 0.24
SPTBN1-205ENST00000496323 HIP1O00291 1037 aa16.56■□□□□ 0.24
SPTBN1-205ENST00000496323 RGL2O15211 777 aa16.56■□□□□ 0.24
SPTBN1-205ENST00000496323 MCCP23508 829 aa16.56■□□□□ 0.24
SPTBN1-205ENST00000496323 USPL1Q5W0Q7 1092 aa16.56■□□□□ 0.24
SPTBN1-205ENST00000496323 VGLL2Q8N8G2 317 aa16.56■□□□□ 0.24
SPTBN1-205ENST00000496323 DNAJC2Q99543 621 aaKnown RBP16.56■□□□□ 0.24
SPTBN1-205ENST00000496323 SRP68Q9UHB9 627 aaKnown RBP16.56■□□□□ 0.24
SPTBN1-205ENST00000496323 AKAP2Q9Y2D5 859 aa16.56■□□□□ 0.24
SPTBN1-205ENST00000496323 A0A0D9SFI3 127 aa16.55■□□□□ 0.24
SPTBN1-205ENST00000496323 PTH1RQ03431 593 aa16.55■□□□□ 0.24
SPTBN1-205ENST00000496323 METTL24Q5JXM2 366 aa16.55■□□□□ 0.24
SPTBN1-205ENST00000496323 TBC1D9BQ66K14 1250 aa16.55■□□□□ 0.24
SPTBN1-205ENST00000496323 XAGE2Q96GT9 111 aa16.55■□□□□ 0.24
SPTBN1-205ENST00000496323 LRRC4BQ9NT99 713 aa16.55■□□□□ 0.24
SPTBN1-205ENST00000496323 KRT27Q7Z3Y8 459 aa16.55■□□□□ 0.24
SPTBN1-205ENST00000496323 SEC31BQ9NQW1 1179 aa16.55■□□□□ 0.24
SPTBN1-205ENST00000496323 CNNM1Q9NRU3 951 aa16.55■□□□□ 0.24
SPTBN1-205ENST00000496323 CHGBP05060 677 aa16.54■□□□□ 0.24
SPTBN1-205ENST00000496323 KIAA1211Q6ZU35 1233 aa16.54■□□□□ 0.24
SPTBN1-205ENST00000496323 DDX46Q7L014 1031 aaKnown RBP16.54■□□□□ 0.24
SPTBN1-205ENST00000496323 RTCBQ9Y3I0 505 aaKnown RBP16.54■□□□□ 0.24
SPTBN1-205ENST00000496323 EP400Q96L91 3159 aa16.54■□□□□ 0.24
SPTBN1-205ENST00000496323 BCORQ6W2J9 1755 aa16.54■□□□□ 0.24
SPTBN1-205ENST00000496323 DDIT3P35638 169 aa16.54■□□□□ 0.24
SPTBN1-205ENST00000496323 ERFEQ4G0M1 354 aa16.54■□□□□ 0.24
SPTBN1-205ENST00000496323 FAM196AQ6ZSG2 479 aa16.54■□□□□ 0.24
SPTBN1-205ENST00000496323 ARHGEF1Q92888 912 aaKnown RBP16.54■□□□□ 0.24
SPTBN1-205ENST00000496323 BICDL1Q6ZP65 573 aa16.53■□□□□ 0.24
SPTBN1-205ENST00000496323 ATP2B3Q16720 1220 aa16.53■□□□□ 0.24
SPTBN1-205ENST00000496323 CCDC152Q4G0S7 254 aa16.53■□□□□ 0.24
SPTBN1-205ENST00000496323 C3orf67Q6ZVT6 689 aa16.53■□□□□ 0.24
SPTBN1-205ENST00000496323 RASEFQ8IZ41 740 aa16.53■□□□□ 0.24
SPTBN1-205ENST00000496323 KBTBD3Q8NAB2 608 aa16.53■□□□□ 0.24
SPTBN1-205ENST00000496323 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.53■□□□□ 0.24
SPTBN1-205ENST00000496323 PAG1Q9NWQ8 432 aa16.53■□□□□ 0.24
SPTBN1-205ENST00000496323 RTL9Q8NET4 1388 aa16.53■□□□□ 0.24
SPTBN1-205ENST00000496323 MED23Q9ULK4 1368 aa16.53■□□□□ 0.24
SPTBN1-205ENST00000496323 LRP5O75197 1615 aa16.52■□□□□ 0.24
SPTBN1-205ENST00000496323 GOLIM4O00461 696 aa16.52■□□□□ 0.24
SPTBN1-205ENST00000496323 PDE8BO95263 885 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms