RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TMC4Q7Z404 712 aa30.21■■■□□ 2.43
COL27A1-208ENST00000494780 VEGFBP49765 207 aa30.2■■■□□ 2.43
COL27A1-208ENST00000494780 MBIPQ9NS73 344 aa30.2■■■□□ 2.43
COL27A1-208ENST00000494780 KIAA2012Q0VF49 1180 aa30.19■■■□□ 2.42
COL27A1-208ENST00000494780 RASSF10A6NK89 507 aa30.18■■■□□ 2.42
COL27A1-208ENST00000494780 ZNF853P0CG23 659 aa30.18■■■□□ 2.42
COL27A1-208ENST00000494780 CXCL9Q07325 125 aa30.18■■■□□ 2.42
COL27A1-208ENST00000494780 DEFB115Q30KQ5 88 aa30.17■■■□□ 2.42
COL27A1-208ENST00000494780 GPRC5DQ9NZD1 345 aa30.17■■■□□ 2.42
COL27A1-208ENST00000494780 CALD1Q05682 793 aaKnown RBP30.16■■■□□ 2.42
COL27A1-208ENST00000494780 TRIM28Q13263 835 aaKnown RBP30.16■■■□□ 2.42
COL27A1-208ENST00000494780 SF3B3Q15393 1217 aaKnown RBP30.16■■■□□ 2.42
COL27A1-208ENST00000494780 FAM89AQ96GI7 184 aa30.16■■■□□ 2.42
COL27A1-208ENST00000494780 ADARB2Q9NS39 739 aaKnown RBP30.16■■■□□ 2.42
COL27A1-208ENST00000494780 IFT57Q9NWB7 429 aa30.16■■■□□ 2.42
COL27A1-208ENST00000494780 DDX60Q8IY21 1712 aaKnown RBP30.16■■■□□ 2.42
COL27A1-208ENST00000494780 ATP5J2-PTCD1G3V325 749 aa30.15■■■□□ 2.42
COL27A1-208ENST00000494780 ZNF428Q96B54 188 aa30.15■■■□□ 2.42
COL27A1-208ENST00000494780 APAF1O14727 1248 aa30.14■■■□□ 2.42
COL27A1-208ENST00000494780 GNAI1P63096 354 aa30.14■■■□□ 2.42
COL27A1-208ENST00000494780 CIAPIN1Q6FI81 312 aa30.14■■■□□ 2.42
COL27A1-208ENST00000494780 ABT1Q9ULW3 272 aaKnown RBP30.14■■■□□ 2.42
COL27A1-208ENST00000494780 FOXN1O15353 648 aa30.13■■■□□ 2.41
COL27A1-208ENST00000494780 TNIP1Q15025 636 aa30.13■■■□□ 2.41
COL27A1-208ENST00000494780 AIDAQ96BJ3 306 aa30.13■■■□□ 2.41
COL27A1-208ENST00000494780 CDHR2Q9BYE9 1310 aa30.13■■■□□ 2.41
COL27A1-208ENST00000494780 LRRC37AA6NMS7 1700 aa30.13■■■□□ 2.41
COL27A1-208ENST00000494780 TAF1P21675 1872 aa30.12■■■□□ 2.41
COL27A1-208ENST00000494780 GMPSP49915 693 aaPredicted RBP30.11■■■□□ 2.41
COL27A1-208ENST00000494780 DUOX1Q9NRD9 1551 aa30.11■■■□□ 2.41
COL27A1-208ENST00000494780 GOLGA2Q08379 1002 aa30.1■■■□□ 2.41
COL27A1-208ENST00000494780 RIC3Q7Z5B4 369 aa30.1■■■□□ 2.41
COL27A1-208ENST00000494780 CELF1Q92879 486 aaKnown RBP30.1■■■□□ 2.41
COL27A1-208ENST00000494780 WBP1LQ9NX94 342 aa30.1■■■□□ 2.41
COL27A1-208ENST00000494780 IRS4O14654 1257 aaPredicted RBP30.09■■■□□ 2.41
COL27A1-208ENST00000494780 CAPN15O75808 1086 aa30.09■■■□□ 2.41
COL27A1-208ENST00000494780 RAD17O75943 681 aa30.09■■■□□ 2.41
COL27A1-208ENST00000494780 BCL2L13Q9BXK5 485 aa30.09■■■□□ 2.41
COL27A1-208ENST00000494780 WDR33Q9C0J8 1336 aaKnown RBP30.08■■■□□ 2.41
COL27A1-208ENST00000494780 CTCFP49711 727 aaPredicted RBP30.08■■■□□ 2.41
COL27A1-208ENST00000494780 FMR1Q06787 632 aaKnown RBP eCLIP30.08■■■□□ 2.41
COL27A1-208ENST00000494780 RTL5Q5HYW3 569 aaPredicted RBP30.08■■■□□ 2.41
COL27A1-208ENST00000494780 PRDM10Q9NQV6 1147 aa30.08■■■□□ 2.41
COL27A1-208ENST00000494780 PHAXQ9H814 394 aaKnown RBP30.07■■■□□ 2.4
COL27A1-208ENST00000494780 NSFL1CQ9UNZ2 370 aaKnown RBP30.07■■■□□ 2.4
COL27A1-208ENST00000494780 YDJCA8MPS7 323 aa30.06■■■□□ 2.4
COL27A1-208ENST00000494780 TRAF5O00463 557 aa30.06■■■□□ 2.4
COL27A1-208ENST00000494780 ELL2O00472 640 aaPredicted RBP30.06■■■□□ 2.4
COL27A1-208ENST00000494780 WASHC4Q2M389 1173 aa30.06■■■□□ 2.4
COL27A1-208ENST00000494780 ZBTB38Q8NAP3 1195 aaPredicted RBP30.06■■■□□ 2.4
COL27A1-208ENST00000494780 CHMP4AQ9BY43 222 aa30.06■■■□□ 2.4
COL27A1-208ENST00000494780 HSP90B1P14625 803 aaKnown RBP30.05■■■□□ 2.4
COL27A1-208ENST00000494780 CST9Q5W186 159 aa30.05■■■□□ 2.4
COL27A1-208ENST00000494780 PGAP2Q9UHJ9 254 aa30.05■■■□□ 2.4
COL27A1-208ENST00000494780 TRPM7Q96QT4 1865 aa30.05■■■□□ 2.4
COL27A1-208ENST00000494780 MAP2K1Q02750 393 aaPredicted RBP30.04■■■□□ 2.4
COL27A1-208ENST00000494780 ZC3H15Q8WU90 426 aaKnown RBP30.04■■■□□ 2.4
COL27A1-208ENST00000494780 RPS8P62241 208 aaKnown RBP30.03■■■□□ 2.4
COL27A1-208ENST00000494780 C8orf58Q8NAV2 365 aa30.03■■■□□ 2.4
COL27A1-208ENST00000494780 ECE1P42892 770 aa30.02■■■□□ 2.4
COL27A1-208ENST00000494780 GPSM2P81274 684 aa30.02■■■□□ 2.4
COL27A1-208ENST00000494780 CCDC191Q8NCU4 936 aa30.02■■■□□ 2.4
COL27A1-208ENST00000494780 MYD88Q99836 296 aa30.02■■■□□ 2.4
COL27A1-208ENST00000494780 POLLQ9UGP5 575 aa30.02■■■□□ 2.4
COL27A1-208ENST00000494780 CNOT7Q9UIV1 285 aaKnown RBP30.02■■■□□ 2.4
COL27A1-208ENST00000494780 TLL2Q9Y6L7 1015 aa30.02■■■□□ 2.4
COL27A1-208ENST00000494780 COL4A1P02462 1669 aa30.01■■■□□ 2.4
COL27A1-208ENST00000494780 C6orf229H3BNL8 230 aa30.01■■■□□ 2.39
COL27A1-208ENST00000494780 CCDC30Q5VVM6 783 aa30.01■■■□□ 2.39
COL27A1-208ENST00000494780 CAPNS2Q96L46 248 aa30.01■■■□□ 2.39
COL27A1-208ENST00000494780 EYA3Q99504 573 aa30.01■■■□□ 2.39
COL27A1-208ENST00000494780 H7C1D1 291 aa30■■■□□ 2.39
COL27A1-208ENST00000494780 HIRAP54198 1017 aaPredicted RBP30■■■□□ 2.39
COL27A1-208ENST00000494780 DPF2Q92785 391 aa30■■■□□ 2.39
COL27A1-208ENST00000494780 RIMBP2O15034 1052 aa29.99■■■□□ 2.39
COL27A1-208ENST00000494780 DDX58O95786 925 aaKnown RBP29.99■■■□□ 2.39
COL27A1-208ENST00000494780 PCCAP05165 728 aaPredicted RBP29.99■■■□□ 2.39
COL27A1-208ENST00000494780 PAXIP1Q6ZW49 1069 aaPredicted RBP29.99■■■□□ 2.39
COL27A1-208ENST00000494780 TRPM4Q8TD43 1214 aa29.99■■■□□ 2.39
COL27A1-208ENST00000494780 GLIS2Q9BZE0 524 aaPredicted RBP29.99■■■□□ 2.39
COL27A1-208ENST00000494780 DBNDD1Q9H9R9 158 aa29.99■■■□□ 2.39
COL27A1-208ENST00000494780 THSD7BQ9C0I4 1608 aa29.98■■■□□ 2.39
COL27A1-208ENST00000494780 PSMD14O00487 310 aa29.98■■■□□ 2.39
COL27A1-208ENST00000494780 MICALL2Q8IY33 904 aa29.98■■■□□ 2.39
COL27A1-208ENST00000494780 TBC1D16Q8TBP0 767 aa29.98■■■□□ 2.39
COL27A1-208ENST00000494780 METTL22Q9BUU2 404 aaPredicted RBP29.98■■■□□ 2.39
COL27A1-208ENST00000494780 CWC25Q9NXE8 425 aaPredicted RBP29.98■■■□□ 2.39
COL27A1-208ENST00000494780 CELF2O95319 508 aaKnown RBP29.97■■■□□ 2.39
COL27A1-208ENST00000494780 LBX1P52954 281 aa29.97■■■□□ 2.39
COL27A1-208ENST00000494780 CYP4F22Q6NT55 531 aa29.97■■■□□ 2.39
COL27A1-208ENST00000494780 SEC31BQ9NQW1 1179 aa29.97■■■□□ 2.39
COL27A1-208ENST00000494780 ZBTB12Q9Y330 459 aaPredicted RBP29.97■■■□□ 2.39
COL27A1-208ENST00000494780 SHTN1A0MZ66 631 aa29.96■■■□□ 2.39
COL27A1-208ENST00000494780 PDE8AO60658 829 aa29.96■■■□□ 2.39
COL27A1-208ENST00000494780 CCDC152Q4G0S7 254 aa29.96■■■□□ 2.39
COL27A1-208ENST00000494780 CDC37L1Q7L3B6 337 aa29.96■■■□□ 2.39
COL27A1-208ENST00000494780 PODXL2Q9NZ53 605 aa29.96■■■□□ 2.39
COL27A1-208ENST00000494780 ECE2O60344 883 aa29.95■■■□□ 2.39
COL27A1-208ENST00000494780 HSPA8P11142 646 aaKnown RBP29.95■■■□□ 2.39
COL27A1-208ENST00000494780 RPS12P25398 132 aaKnown RBP29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms