RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 MAP2K1Q02750 393 aaPredicted RBP5.6□□□□□ -1.51
PRKD3-210ENST00000494667 MAPK8IP2Q13387 824 aaPredicted RBP5.6□□□□□ -1.51
PRKD3-210ENST00000494667 VPS53Q5VIR6 699 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 TTC6Q86TZ1 520 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 NUTM1Q86Y26 1132 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 DHX37Q8IY37 1157 aaKnown RBP5.6□□□□□ -1.51
PRKD3-210ENST00000494667 MPNDQ8N594 471 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 FAM71BQ8TC56 605 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 CHMP4CQ96CF2 233 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 SNRKQ9NRH2 765 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 U2SURPO15042 1029 aaKnown RBP5.6□□□□□ -1.51
PRKD3-210ENST00000494667 APOBRQ0VD83 1088 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 STX1AQ16623 288 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 ARFGAP3Q9NP61 516 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 SBNO1A3KN83 1393 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 JCADQ9P266 1359 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 DIP2AQ14689 1571 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 KDRP35968 1356 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.6□□□□□ -1.51
PRKD3-210ENST00000494667 H3BQF6 201 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 GNAI3P08754 354 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 U2AF1L5P0DN76 240 aaPredicted RBP5.6□□□□□ -1.51
PRKD3-210ENST00000494667 MRPL12P52815 198 aaKnown RBP5.6□□□□□ -1.51
PRKD3-210ENST00000494667 U2AF1Q01081 240 aaKnown RBP eCLIP5.6□□□□□ -1.51
PRKD3-210ENST00000494667 MAP9Q49MG5 647 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 ATL3Q6DD88 541 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 RUFY3Q7L099 469 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 DHX40Q8IX18 779 aaKnown RBP5.6□□□□□ -1.51
PRKD3-210ENST00000494667 MAGEC3Q8TD91 643 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 TNMDQ9H2S6 317 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 NPHP4O75161 1426 aaPredicted RBP5.6□□□□□ -1.51
PRKD3-210ENST00000494667 SRGAP3O43295 1099 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 IRX1P78414 480 aaPredicted RBP5.6□□□□□ -1.51
PRKD3-210ENST00000494667 NEUROD2Q15784 382 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 NBPF9Q3BBW0 867 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 LRRC31Q6UY01 552 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 PRPF38AQ8NAV1 312 aaKnown RBP5.6□□□□□ -1.51
PRKD3-210ENST00000494667 LRRN4CLQ8ND94 238 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 DDX11Q96FC9 970 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 MRFAP1Q9Y605 127 aa5.6□□□□□ -1.51
PRKD3-210ENST00000494667 PDCP20941 246 aa5.59□□□□□ -1.51
PRKD3-210ENST00000494667 ICA1Q05084 483 aa5.59□□□□□ -1.51
PRKD3-210ENST00000494667 WLSQ5T9L3 541 aa5.59□□□□□ -1.51
PRKD3-210ENST00000494667 DRC1Q96MC2 740 aa5.59□□□□□ -1.51
PRKD3-210ENST00000494667 KDM6AO15550 1401 aaPredicted RBP5.59□□□□□ -1.51
PRKD3-210ENST00000494667 HMMRO75330 724 aa5.59□□□□□ -1.51
PRKD3-210ENST00000494667 LIG1P18858 919 aa5.59□□□□□ -1.51
PRKD3-210ENST00000494667 NFE2L2Q16236 605 aa5.59□□□□□ -1.51
PRKD3-210ENST00000494667 BEND6Q5SZJ8 279 aaPredicted RBP5.59□□□□□ -1.51
PRKD3-210ENST00000494667 C16orf71Q8IYS4 520 aaPredicted RBP5.59□□□□□ -1.51
PRKD3-210ENST00000494667 OTUD7AQ8TE49 926 aaPredicted RBP5.59□□□□□ -1.51
PRKD3-210ENST00000494667 ZBTB9Q96C00 473 aa5.59□□□□□ -1.51
PRKD3-210ENST00000494667 HYPKQ9NX55 129 aa5.59□□□□□ -1.51
PRKD3-210ENST00000494667 MCM8Q9UJA3 840 aa5.59□□□□□ -1.51
PRKD3-210ENST00000494667 RIMS2Q9UQ26 1411 aa5.59□□□□□ -1.51
PRKD3-210ENST00000494667 TXLNAP40222 546 aa5.59□□□□□ -1.52
PRKD3-210ENST00000494667 TDO2P48775 406 aa5.59□□□□□ -1.52
PRKD3-210ENST00000494667 DNM1Q05193 864 aaKnown RBP5.59□□□□□ -1.52
PRKD3-210ENST00000494667 GORABQ5T7V8 394 aa5.59□□□□□ -1.52
PRKD3-210ENST00000494667 ISM2Q6H9L7 571 aa5.59□□□□□ -1.52
PRKD3-210ENST00000494667 POTEDQ86YR6 584 aa5.59□□□□□ -1.52
PRKD3-210ENST00000494667 AMOTL1Q8IY63 956 aa5.59□□□□□ -1.52
PRKD3-210ENST00000494667 TRERF1Q96PN7 1200 aa5.59□□□□□ -1.52
PRKD3-210ENST00000494667 SMC3Q9UQE7 1217 aa5.59□□□□□ -1.52
PRKD3-210ENST00000494667 SNX14Q9Y5W7 946 aa5.59□□□□□ -1.52
PRKD3-210ENST00000494667 RPGRIP1LQ68CZ1 1315 aa5.59□□□□□ -1.52
PRKD3-210ENST00000494667 TSPOAP1O95153 1857 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 EIF3JO75822 258 aaKnown RBP5.58□□□□□ -1.52
PRKD3-210ENST00000494667 ST3GAL1Q11201 340 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 CCDC30Q5VVM6 783 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 SPATS2Q86XZ4 545 aaKnown RBP5.58□□□□□ -1.52
PRKD3-210ENST00000494667 FAXDC2Q96IV6 333 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 FAM210AQ96ND0 272 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 LSG1Q9H089 658 aaKnown RBP5.58□□□□□ -1.52
PRKD3-210ENST00000494667 C14orf93Q9H972 538 aaKnown RBP5.58□□□□□ -1.52
PRKD3-210ENST00000494667 DDX60Q8IY21 1712 aaKnown RBP5.58□□□□□ -1.52
PRKD3-210ENST00000494667 FANCGO15287 622 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 LONRF2Q1L5Z9 754 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 KCNV1Q6PIU1 500 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 HDXQ7Z353 690 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 DRC7Q8IY82 874 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 ZSWIM6Q9HCJ5 1215 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 GGA2Q9UJY4 613 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 L1RE1Q9UN81 338 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 PPP6R1Q9UPN7 881 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 MON2Q7Z3U7 1717 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 FIBPO43427 364 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 AK2P54819 239 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 PLCB4Q15147 1175 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 DNAJC21Q5F1R6 531 aaKnown RBP5.58□□□□□ -1.52
PRKD3-210ENST00000494667 ARMCX5Q6P1M9 558 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 YTHDF3Q7Z739 585 aaKnown RBP5.58□□□□□ -1.52
PRKD3-210ENST00000494667 BICD2Q8TD16 824 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 KIFC2Q96AC6 838 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 PSMD1Q99460 953 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 C1orf115Q9H7X2 142 aa5.58□□□□□ -1.52
PRKD3-210ENST00000494667 GNL3LQ9NVN8 582 aaKnown RBP5.58□□□□□ -1.52
PRKD3-210ENST00000494667 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.58□□□□□ -1.52
PRKD3-210ENST00000494667 SPATA31D1Q6ZQQ2 1576 aa5.57□□□□□ -1.52
PRKD3-210ENST00000494667 A6NNZ2 444 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms