RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 MPNDQ8N594 471 aa31.05■■■□□ 2.56
TTC3-224ENST00000494243 SUPT20HQ8NEM7 779 aa31.05■■■□□ 2.56
TTC3-224ENST00000494243 TAF1P21675 1872 aa31.04■■■□□ 2.56
TTC3-224ENST00000494243 FAM89AQ96GI7 184 aa31.04■■■□□ 2.56
TTC3-224ENST00000494243 ZNRF3Q9ULT6 936 aa31.04■■■□□ 2.56
TTC3-224ENST00000494243 DDX60Q8IY21 1712 aaKnown RBP31.04■■■□□ 2.56
TTC3-224ENST00000494243 CXCL9Q07325 125 aa31.03■■■□□ 2.56
TTC3-224ENST00000494243 IFT57Q9NWB7 429 aa31.03■■■□□ 2.56
TTC3-224ENST00000494243 TRIM28Q13263 835 aaKnown RBP31.02■■■□□ 2.56
TTC3-224ENST00000494243 KIAA2012Q0VF49 1180 aa31.01■■■□□ 2.55
TTC3-224ENST00000494243 SF3B3Q15393 1217 aaKnown RBP31.01■■■□□ 2.55
TTC3-224ENST00000494243 VEGFBP49765 207 aa31■■■□□ 2.55
TTC3-224ENST00000494243 GNAI1P63096 354 aa31■■■□□ 2.55
TTC3-224ENST00000494243 USP50Q70EL3 339 aaPredicted RBP31■■■□□ 2.55
TTC3-224ENST00000494243 ELL2O00472 640 aaPredicted RBP30.99■■■□□ 2.55
TTC3-224ENST00000494243 TMC4Q7Z404 712 aa30.99■■■□□ 2.55
TTC3-224ENST00000494243 PHAXQ9H814 394 aaKnown RBP30.99■■■□□ 2.55
TTC3-224ENST00000494243 GPRC5DQ9NZD1 345 aa30.99■■■□□ 2.55
TTC3-224ENST00000494243 CALD1Q05682 793 aaKnown RBP30.98■■■□□ 2.55
TTC3-224ENST00000494243 DUOX1Q9NRD9 1551 aa30.97■■■□□ 2.55
TTC3-224ENST00000494243 RTL5Q5HYW3 569 aaPredicted RBP30.97■■■□□ 2.55
TTC3-224ENST00000494243 C8orf58Q8NAV2 365 aa30.97■■■□□ 2.55
TTC3-224ENST00000494243 CELF1Q92879 486 aaKnown RBP30.97■■■□□ 2.55
TTC3-224ENST00000494243 LRRC37AA6NMS7 1700 aa30.97■■■□□ 2.55
TTC3-224ENST00000494243 RASSF10A6NK89 507 aa30.96■■■□□ 2.55
TTC3-224ENST00000494243 FMR1Q06787 632 aaKnown RBP eCLIP30.96■■■□□ 2.553e-10■■■□□ 15.6
TTC3-224ENST00000494243 TNS4Q8IZW8 715 aa30.96■■■□□ 2.55
TTC3-224ENST00000494243 COL4A1P02462 1669 aa30.96■■■□□ 2.55
TTC3-224ENST00000494243 GMPSP49915 693 aaPredicted RBP30.95■■■□□ 2.55
TTC3-224ENST00000494243 CIAPIN1Q6FI81 312 aa30.95■■■□□ 2.55
TTC3-224ENST00000494243 RIC3Q7Z5B4 369 aa30.95■■■□□ 2.55
TTC3-224ENST00000494243 ADARB2Q9NS39 739 aaKnown RBP30.95■■■□□ 2.55
TTC3-224ENST00000494243 IRS4O14654 1257 aaPredicted RBP30.94■■■□□ 2.54
TTC3-224ENST00000494243 CCDC184Q52MB2 194 aa30.94■■■□□ 2.54
TTC3-224ENST00000494243 YDJCA8MPS7 323 aa30.93■■■□□ 2.54
TTC3-224ENST00000494243 RAD17O75943 681 aa30.93■■■□□ 2.54
TTC3-224ENST00000494243 DEFB115Q30KQ5 88 aa30.93■■■□□ 2.54
TTC3-224ENST00000494243 GOLGA2Q08379 1002 aa30.92■■■□□ 2.54
TTC3-224ENST00000494243 FOXN1O15353 648 aa30.91■■■□□ 2.54
TTC3-224ENST00000494243 ZBTB38Q8NAP3 1195 aaPredicted RBP30.91■■■□□ 2.54
TTC3-224ENST00000494243 TRAF5O00463 557 aa30.9■■■□□ 2.54
TTC3-224ENST00000494243 TNIP1Q15025 636 aa30.9■■■□□ 2.54
TTC3-224ENST00000494243 NSFL1CQ9UNZ2 370 aaKnown RBP30.9■■■□□ 2.54
TTC3-224ENST00000494243 CST9Q5W186 159 aa30.89■■■□□ 2.54
TTC3-224ENST00000494243 MYD88Q99836 296 aa30.89■■■□□ 2.54
TTC3-224ENST00000494243 ABT1Q9ULW3 272 aaKnown RBP30.89■■■□□ 2.54
TTC3-224ENST00000494243 CDHR2Q9BYE9 1310 aa30.89■■■□□ 2.54
TTC3-224ENST00000494243 RPS8P62241 208 aaKnown RBP30.88■■■□□ 2.53
TTC3-224ENST00000494243 GPSM2P81274 684 aa30.88■■■□□ 2.53
TTC3-224ENST00000494243 TSPYL6Q8N831 410 aa30.88■■■□□ 2.53
TTC3-224ENST00000494243 POLLQ9UGP5 575 aa30.88■■■□□ 2.53
TTC3-224ENST00000494243 PGAP2Q9UHJ9 254 aa30.88■■■□□ 2.53
TTC3-224ENST00000494243 HIRAP54198 1017 aaPredicted RBP30.87■■■□□ 2.53
TTC3-224ENST00000494243 WASHC4Q2M389 1173 aa30.87■■■□□ 2.53
TTC3-224ENST00000494243 WBP1LQ9NX94 342 aa30.87■■■□□ 2.53
TTC3-224ENST00000494243 CCDC30Q5VVM6 783 aa30.86■■■□□ 2.53
TTC3-224ENST00000494243 CCDC191Q8NCU4 936 aa30.86■■■□□ 2.53
TTC3-224ENST00000494243 BCL2L13Q9BXK5 485 aa30.86■■■□□ 2.53
TTC3-224ENST00000494243 WDR33Q9C0J8 1336 aaKnown RBP30.86■■■□□ 2.53
TTC3-224ENST00000494243 PCCAP05165 728 aaPredicted RBP30.85■■■□□ 2.53
TTC3-224ENST00000494243 METTL22Q9BUU2 404 aaPredicted RBP30.85■■■□□ 2.53
TTC3-224ENST00000494243 SEC31BQ9NQW1 1179 aa30.85■■■□□ 2.53
TTC3-224ENST00000494243 SHTN1A0MZ66 631 aa30.84■■■□□ 2.53
TTC3-224ENST00000494243 RIMBP2O15034 1052 aa30.84■■■□□ 2.53
TTC3-224ENST00000494243 CNOT7Q9UIV1 285 aaKnown RBP30.84■■■□□ 2.53
TTC3-224ENST00000494243 TRPM7Q96QT4 1865 aa30.83■■■□□ 2.53
TTC3-224ENST00000494243 C6orf229H3BNL8 230 aa30.83■■■□□ 2.53
TTC3-224ENST00000494243 TRPM4Q8TD43 1214 aa30.83■■■□□ 2.53
TTC3-224ENST00000494243 JARID2Q92833 1246 aaPredicted RBP30.83■■■□□ 2.53
TTC3-224ENST00000494243 TSR2Q969E8 191 aaKnown RBP30.83■■■□□ 2.53
TTC3-224ENST00000494243 DBNDD1Q9H9R9 158 aa30.83■■■□□ 2.53
TTC3-224ENST00000494243 CAPN15O75808 1086 aa30.82■■■□□ 2.52
TTC3-224ENST00000494243 TBC1D16Q8TBP0 767 aa30.82■■■□□ 2.52
TTC3-224ENST00000494243 ZC3H15Q8WU90 426 aaKnown RBP30.82■■■□□ 2.52
TTC3-224ENST00000494243 CHMP4AQ9BY43 222 aa30.82■■■□□ 2.52
TTC3-224ENST00000494243 CWC25Q9NXE8 425 aaPredicted RBP30.82■■■□□ 2.52
TTC3-224ENST00000494243 ZBTB12Q9Y330 459 aaPredicted RBP30.82■■■□□ 2.52
TTC3-224ENST00000494243 PSMD14O00487 310 aa30.81■■■□□ 2.52
TTC3-224ENST00000494243 HSP90B1P14625 803 aaKnown RBP30.81■■■□□ 2.52
TTC3-224ENST00000494243 CCDC27Q2M243 656 aa30.81■■■□□ 2.52
TTC3-224ENST00000494243 AIDAQ96BJ3 306 aa30.81■■■□□ 2.52
TTC3-224ENST00000494243 GLIS2Q9BZE0 524 aaPredicted RBP30.81■■■□□ 2.52
TTC3-224ENST00000494243 PRDM10Q9NQV6 1147 aa30.81■■■□□ 2.52
TTC3-224ENST00000494243 KCNQ5Q9NR82 932 aa30.81■■■□□ 2.52
TTC3-224ENST00000494243 PDE8AO60658 829 aa30.8■■■□□ 2.52
TTC3-224ENST00000494243 DDX58O95786 925 aaKnown RBP30.8■■■□□ 2.52
TTC3-224ENST00000494243 CTCFP49711 727 aaPredicted RBP30.8■■■□□ 2.52
TTC3-224ENST00000494243 DPF2Q92785 391 aa30.8■■■□□ 2.52
TTC3-224ENST00000494243 GPR101Q96P66 508 aaPredicted RBP30.8■■■□□ 2.52
TTC3-224ENST00000494243 PODXL2Q9NZ53 605 aa30.8■■■□□ 2.52
TTC3-224ENST00000494243 MAP3K2Q9Y2U5 619 aa30.8■■■□□ 2.52
TTC3-224ENST00000494243 TLL2Q9Y6L7 1015 aa30.8■■■□□ 2.52
TTC3-224ENST00000494243 DOK7Q18PE1 504 aa30.79■■■□□ 2.52
TTC3-224ENST00000494243 WWC1Q8IX03 1113 aa30.79■■■□□ 2.52
TTC3-224ENST00000494243 MICALL2Q8IY33 904 aa30.79■■■□□ 2.52
TTC3-224ENST00000494243 H7C1D1 291 aa30.78■■■□□ 2.52
TTC3-224ENST00000494243 CCDC152Q4G0S7 254 aa30.78■■■□□ 2.52
TTC3-224ENST00000494243 KSR2Q6VAB6 950 aa30.78■■■□□ 2.52
TTC3-224ENST00000494243 CAPNS2Q96L46 248 aa30.78■■■□□ 2.52
TTC3-224ENST00000494243 EYA3Q99504 573 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms