RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 WDR90Q96KV7 1748 aa18.8■□□□□ 0.6
ATG4B-224ENST00000494132 GLTPD2A6NH11 291 aa18.79■□□□□ 0.6
ATG4B-224ENST00000494132 NEURL1BA8MQ27 555 aa18.79■□□□□ 0.6
ATG4B-224ENST00000494132 E9PSI1 815 aa18.79■□□□□ 0.6
ATG4B-224ENST00000494132 SLFN5Q08AF3 891 aa18.79■□□□□ 0.6
ATG4B-224ENST00000494132 SF3B3Q15393 1217 aaKnown RBP18.79■□□□□ 0.6
ATG4B-224ENST00000494132 DNAAF4Q8WXU2 420 aa18.79■□□□□ 0.6
ATG4B-224ENST00000494132 ATP6V0A2Q9Y487 856 aa18.79■□□□□ 0.6
ATG4B-224ENST00000494132 CC2D2BQ6DHV5 1058 aa18.78■□□□□ 0.6
ATG4B-224ENST00000494132 PSMD1Q99460 953 aa18.78■□□□□ 0.6
ATG4B-224ENST00000494132 SEC31BQ9NQW1 1179 aa18.78■□□□□ 0.6
ATG4B-224ENST00000494132 ZNF541Q9H0D2 1346 aa18.77■□□□□ 0.6
ATG4B-224ENST00000494132 DDNO94850 711 aaPredicted RBP18.77■□□□□ 0.6
ATG4B-224ENST00000494132 DUOX1Q9NRD9 1551 aa18.76■□□□□ 0.59
ATG4B-224ENST00000494132 PDE8AO60658 829 aa18.76■□□□□ 0.59
ATG4B-224ENST00000494132 BBOX1O75936 387 aa18.76■□□□□ 0.59
ATG4B-224ENST00000494132 DPY19L2Q6NUT2 758 aa18.76■□□□□ 0.59
ATG4B-224ENST00000494132 UBE3BQ7Z3V4 1068 aa18.76■□□□□ 0.59
ATG4B-224ENST00000494132 SP8Q8IXZ3 490 aa18.76■□□□□ 0.59
ATG4B-224ENST00000494132 TMX4Q9H1E5 349 aaPredicted RBP18.76■□□□□ 0.59
ATG4B-224ENST00000494132 C16orf71Q8IYS4 520 aaPredicted RBP18.75■□□□□ 0.59
ATG4B-224ENST00000494132 BCL2L13Q9BXK5 485 aa18.75■□□□□ 0.59
ATG4B-224ENST00000494132 CDHR2Q9BYE9 1310 aa18.74■□□□□ 0.59
ATG4B-224ENST00000494132 GCKRQ14397 625 aa18.74■□□□□ 0.59
ATG4B-224ENST00000494132 AOC3Q16853 763 aa18.74■□□□□ 0.59
ATG4B-224ENST00000494132 DPP8Q6V1X1 898 aaPredicted RBP18.74■□□□□ 0.59
ATG4B-224ENST00000494132 LARGE2Q8N3Y3 721 aa18.74■□□□□ 0.59
ATG4B-224ENST00000494132 MPNDQ8N594 471 aa18.74■□□□□ 0.59
ATG4B-224ENST00000494132 SCN4AP35499 1836 aa18.74■□□□□ 0.59
ATG4B-224ENST00000494132 LTBP1Q14766 1721 aa18.74■□□□□ 0.59
ATG4B-224ENST00000494132 POTECB2RU33 542 aa18.73■□□□□ 0.59
ATG4B-224ENST00000494132 PPIP5K2O43314 1243 aa18.73■□□□□ 0.59
ATG4B-224ENST00000494132 TOMM70O94826 608 aa18.73■□□□□ 0.59
ATG4B-224ENST00000494132 JDP2Q8WYK2 163 aa18.73■□□□□ 0.59
ATG4B-224ENST00000494132 H7C1W4 665 aa18.72■□□□□ 0.59
ATG4B-224ENST00000494132 CTSWP56202 376 aa18.72■□□□□ 0.59
ATG4B-224ENST00000494132 CCDC152Q4G0S7 254 aa18.72■□□□□ 0.59
ATG4B-224ENST00000494132 SLC4A10Q6U841 1118 aa18.72■□□□□ 0.59
ATG4B-224ENST00000494132 MRPL50Q8N5N7 158 aaKnown RBP18.72■□□□□ 0.59
ATG4B-224ENST00000494132 LINS1Q8NG48 757 aa18.72■□□□□ 0.59
ATG4B-224ENST00000494132 SSH1Q8WYL5 1049 aa18.72■□□□□ 0.59
ATG4B-224ENST00000494132 HSP90B1P14625 803 aaKnown RBP18.71■□□□□ 0.59
ATG4B-224ENST00000494132 VEGFAP15692 232 aaPredicted RBP18.71■□□□□ 0.59
ATG4B-224ENST00000494132 RPS8P62241 208 aaKnown RBP18.71■□□□□ 0.59
ATG4B-224ENST00000494132 GRIPAP1Q4V328 841 aa18.71■□□□□ 0.59
ATG4B-224ENST00000494132 BEND3Q5T5X7 828 aa18.71■□□□□ 0.59
ATG4B-224ENST00000494132 NSFL1CQ9UNZ2 370 aaKnown RBP18.71■□□□□ 0.59
ATG4B-224ENST00000494132 FZD9O00144 591 aa18.7■□□□□ 0.58
ATG4B-224ENST00000494132 GPSM2P81274 684 aa18.7■□□□□ 0.58
ATG4B-224ENST00000494132 NIM1KQ8IY84 436 aa18.7■□□□□ 0.58
ATG4B-224ENST00000494132 TRMT2AQ8IZ69 625 aaKnown RBP18.7■□□□□ 0.58
ATG4B-224ENST00000494132 TTLL11Q8NHH1 800 aa18.7■□□□□ 0.58
ATG4B-224ENST00000494132 GPR101Q96P66 508 aaPredicted RBP18.7■□□□□ 0.58
ATG4B-224ENST00000494132 GREM2Q9H772 168 aa18.7■□□□□ 0.58
ATG4B-224ENST00000494132 CASP7P55210 303 aa18.69■□□□□ 0.58
ATG4B-224ENST00000494132 TMC4Q7Z404 712 aa18.69■□□□□ 0.58
ATG4B-224ENST00000494132 RTFDC1Q9BY42 306 aaPredicted RBP18.69■□□□□ 0.58
ATG4B-224ENST00000494132 GJA3Q9Y6H8 435 aa18.69■□□□□ 0.58
ATG4B-224ENST00000494132 EIF6P56537 245 aaKnown RBP18.68■□□□□ 0.58
ATG4B-224ENST00000494132 HNRNPUQ00839 825 aaKnown RBP eCLIP18.68■□□□□ 0.58
ATG4B-224ENST00000494132 SUPT20HQ8NEM7 779 aa18.68■□□□□ 0.58
ATG4B-224ENST00000494132 RBM46Q8TBY0 533 aaKnown RBP18.68■□□□□ 0.58
ATG4B-224ENST00000494132 C6orf229H3BNL8 230 aa18.67■□□□□ 0.58
ATG4B-224ENST00000494132 RIMBP2O15034 1052 aa18.67■□□□□ 0.58
ATG4B-224ENST00000494132 POTEIP0CG38 1075 aa18.67■□□□□ 0.58
ATG4B-224ENST00000494132 POTEJP0CG39 1038 aa18.67■□□□□ 0.58
ATG4B-224ENST00000494132 FAM161AQ3B820 660 aa18.67■□□□□ 0.58
ATG4B-224ENST00000494132 ANKRD18AQ8IVF6 992 aa18.67■□□□□ 0.58
ATG4B-224ENST00000494132 SMC4Q9NTJ3 1288 aa18.67■□□□□ 0.58
ATG4B-224ENST00000494132 SCN9AQ15858 1988 aa18.67■□□□□ 0.58
ATG4B-224ENST00000494132 A0A1B0GUL6 1792 aa18.67■□□□□ 0.58
ATG4B-224ENST00000494132 HSPA6P17066 643 aa18.66■□□□□ 0.58
ATG4B-224ENST00000494132 KIAA2012Q0VF49 1180 aa18.66■□□□□ 0.58
ATG4B-224ENST00000494132 SRCIN1Q9C0H9 1055 aa18.66■□□□□ 0.58
ATG4B-224ENST00000494132 POLLQ9UGP5 575 aa18.66■□□□□ 0.58
ATG4B-224ENST00000494132 L3MBTL3Q96JM7 780 aaPredicted RBP18.65■□□□□ 0.58
ATG4B-224ENST00000494132 PLA2G12BQ9BX93 195 aa18.65■□□□□ 0.58
ATG4B-224ENST00000494132 ANKIB1Q9P2G1 1089 aa18.65■□□□□ 0.58
ATG4B-224ENST00000494132 CHMP3Q9Y3E7 222 aa18.65■□□□□ 0.58
ATG4B-224ENST00000494132 GRM8O00222 908 aa18.64■□□□□ 0.57
ATG4B-224ENST00000494132 GPC2Q8N158 579 aa18.64■□□□□ 0.57
ATG4B-224ENST00000494132 TBC1D16Q8TBP0 767 aa18.64■□□□□ 0.57
ATG4B-224ENST00000494132 CDC5LQ99459 802 aaKnown RBP18.64■□□□□ 0.57
ATG4B-224ENST00000494132 DBNDD1Q9H9R9 158 aa18.64■□□□□ 0.57
ATG4B-224ENST00000494132 C9orf78Q9NZ63 289 aaPredicted RBP18.64■□□□□ 0.57
ATG4B-224ENST00000494132 UFL1O94874 794 aa18.63■□□□□ 0.57
ATG4B-224ENST00000494132 ITGA6P23229 1130 aa18.63■□□□□ 0.57
ATG4B-224ENST00000494132 WASHC4Q2M389 1173 aa18.63■□□□□ 0.57
ATG4B-224ENST00000494132 ALDH1L2Q3SY69 923 aa18.63■□□□□ 0.57
ATG4B-224ENST00000494132 EAPPQ56P03 285 aaPredicted RBP18.63■□□□□ 0.57
ATG4B-224ENST00000494132 EPHA10Q5JZY3 1008 aa18.63■□□□□ 0.57
ATG4B-224ENST00000494132 SMC1BQ8NDV3 1235 aa18.63■□□□□ 0.57
ATG4B-224ENST00000494132 TAF1DQ9H5J8 278 aaPredicted RBP18.63■□□□□ 0.57
ATG4B-224ENST00000494132 ZNRF3Q9ULT6 936 aa18.63■□□□□ 0.57
ATG4B-224ENST00000494132 RTL9Q8NET4 1388 aa18.63■□□□□ 0.57
ATG4B-224ENST00000494132 IQCA1LA6NCM1 817 aa18.62■□□□□ 0.57
ATG4B-224ENST00000494132 WTIPA6NIX2 430 aaPredicted RBP18.62■□□□□ 0.57
ATG4B-224ENST00000494132 YDJCA8MPS7 323 aa18.62■□□□□ 0.57
ATG4B-224ENST00000494132 ALDH1L1O75891 902 aa18.62■□□□□ 0.57
ATG4B-224ENST00000494132 RAD17O75943 681 aa18.62■□□□□ 0.57
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