RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 SSH1Q8WYL5 1049 aa14.91□□□□□ -0.02
UBA3-211ENST00000493957 FAM89AQ96GI7 184 aa14.91□□□□□ -0.02
UBA3-211ENST00000493957 DICER1Q9UPY3 1922 aaKnown RBP14.91□□□□□ -0.02
UBA3-211ENST00000493957 ZBED9Q6R2W3 1325 aa14.91□□□□□ -0.02
UBA3-211ENST00000493957 SH3TC1Q8TE82 1336 aa14.91□□□□□ -0.02
UBA3-211ENST00000493957 TRIM28Q13263 835 aaKnown RBP14.9□□□□□ -0.02
UBA3-211ENST00000493957 CRY2Q49AN0 593 aa14.9□□□□□ -0.02
UBA3-211ENST00000493957 STYK1Q6J9G0 422 aa14.9□□□□□ -0.02
UBA3-211ENST00000493957 TTLL6Q8N841 843 aa14.9□□□□□ -0.02
UBA3-211ENST00000493957 GRIN3BO60391 1043 aa14.89□□□□□ -0.03
UBA3-211ENST00000493957 NPR1P16066 1061 aa14.89□□□□□ -0.03
UBA3-211ENST00000493957 SLC10A5Q5PT55 438 aa14.89□□□□□ -0.03
UBA3-211ENST00000493957 PRPF40BQ6NWY9 871 aaKnown RBP14.89□□□□□ -0.03
UBA3-211ENST00000493957 DNAAF4Q8WXU2 420 aa14.89□□□□□ -0.03
UBA3-211ENST00000493957 MASTLQ96GX5 879 aa14.89□□□□□ -0.03
UBA3-211ENST00000493957 RNF123Q5XPI4 1314 aa14.89□□□□□ -0.03
UBA3-211ENST00000493957 TIAM2Q8IVF5 1701 aa14.89□□□□□ -0.03
UBA3-211ENST00000493957 NEURL1BA8MQ27 555 aa14.88□□□□□ -0.03
UBA3-211ENST00000493957 OLFM4Q6UX06 510 aa14.88□□□□□ -0.03
UBA3-211ENST00000493957 ARHGAP27Q6ZUM4 889 aa14.88□□□□□ -0.03
UBA3-211ENST00000493957 CWC25Q9NXE8 425 aaPredicted RBP14.88□□□□□ -0.03
UBA3-211ENST00000493957 PDZRN3Q9UPQ7 1066 aa14.88□□□□□ -0.03
UBA3-211ENST00000493957 C21orf2O43822 256 aa14.87□□□□□ -0.03
UBA3-211ENST00000493957 RASSF7Q02833 373 aa14.87□□□□□ -0.03
UBA3-211ENST00000493957 CCDC191Q8NCU4 936 aa14.87□□□□□ -0.03
UBA3-211ENST00000493957 LRRC37AA6NMS7 1700 aa14.86□□□□□ -0.03
UBA3-211ENST00000493957 IRS4O14654 1257 aaPredicted RBP14.86□□□□□ -0.03
UBA3-211ENST00000493957 PCCAP05165 728 aaPredicted RBP14.86□□□□□ -0.03
UBA3-211ENST00000493957 PRELPP51888 382 aa14.86□□□□□ -0.03
UBA3-211ENST00000493957 ZBTB38Q8NAP3 1195 aaPredicted RBP14.86□□□□□ -0.03
UBA3-211ENST00000493957 RPGRQ92834 1020 aaKnown RBP14.86□□□□□ -0.03
UBA3-211ENST00000493957 CNKSR1Q969H4 720 aa14.86□□□□□ -0.03
UBA3-211ENST00000493957 SMC4Q9NTJ3 1288 aa14.86□□□□□ -0.03
UBA3-211ENST00000493957 YY1P25490 414 aa14.85□□□□□ -0.03
UBA3-211ENST00000493957 NEXNQ0ZGT2 675 aa14.85□□□□□ -0.03
UBA3-211ENST00000493957 ALDH1L2Q3SY69 923 aa14.85□□□□□ -0.03
UBA3-211ENST00000493957 BEND3Q5T5X7 828 aa14.85□□□□□ -0.03
UBA3-211ENST00000493957 C7orf43Q8WVR3 580 aa14.85□□□□□ -0.03
UBA3-211ENST00000493957 NLRP3Q96P20 1036 aa14.85□□□□□ -0.03
UBA3-211ENST00000493957 ABCC4O15439 1325 aa14.85□□□□□ -0.03
UBA3-211ENST00000493957 NFKBIEO00221 500 aa14.84□□□□□ -0.03
UBA3-211ENST00000493957 HOXA10P31260 410 aaPredicted RBP14.84□□□□□ -0.03
UBA3-211ENST00000493957 RARSP54136 660 aaKnown RBP14.84□□□□□ -0.03
UBA3-211ENST00000493957 GCKRQ14397 625 aa14.84□□□□□ -0.03
UBA3-211ENST00000493957 SLC4A10Q6U841 1118 aa14.84□□□□□ -0.03
UBA3-211ENST00000493957 LINS1Q8NG48 757 aa14.84□□□□□ -0.03
UBA3-211ENST00000493957 METRNQ9UJH8 293 aa14.84□□□□□ -0.03
UBA3-211ENST00000493957 SNED1Q8TER0 1413 aa14.83□□□□□ -0.03
UBA3-211ENST00000493957 CT47B1P0C2W7 299 aaPredicted RBP14.83□□□□□ -0.04
UBA3-211ENST00000493957 POTEJP0CG39 1038 aa14.83□□□□□ -0.04
UBA3-211ENST00000493957 UBE3BQ7Z3V4 1068 aa14.83□□□□□ -0.04
UBA3-211ENST00000493957 RBM17Q96I25 401 aaKnown RBP14.83□□□□□ -0.04
UBA3-211ENST00000493957 A0A1B0GUL6 1792 aa14.83□□□□□ -0.04
UBA3-211ENST00000493957 H7C1W4 665 aa14.82□□□□□ -0.04
UBA3-211ENST00000493957 CASP7P55210 303 aa14.82□□□□□ -0.04
UBA3-211ENST00000493957 ASTLQ6HA08 431 aaPredicted RBP14.82□□□□□ -0.04
UBA3-211ENST00000493957 CCDC85AQ96PX6 553 aaPredicted RBP14.82□□□□□ -0.04
UBA3-211ENST00000493957 CRAMP1Q96RY5 1269 aa14.82□□□□□ -0.04
UBA3-211ENST00000493957 NOB1Q9ULX3 412 aaKnown RBP14.82□□□□□ -0.04
UBA3-211ENST00000493957 LTBP1Q14766 1721 aa14.82□□□□□ -0.04
UBA3-211ENST00000493957 CDHR2Q9BYE9 1310 aa14.82□□□□□ -0.04
UBA3-211ENST00000493957 PPEF1O14829 653 aaPredicted RBP14.81□□□□□ -0.04
UBA3-211ENST00000493957 BCAR3O75815 825 aa14.81□□□□□ -0.04
UBA3-211ENST00000493957 ALDH1B1P30837 517 aa14.81□□□□□ -0.04
UBA3-211ENST00000493957 SF3B3Q15393 1217 aaKnown RBP14.81□□□□□ -0.04
UBA3-211ENST00000493957 TNNQ9UQP3 1299 aa14.81□□□□□ -0.04
UBA3-211ENST00000493957 PTPRCP08575 1304 aa14.81□□□□□ -0.04
UBA3-211ENST00000493957 PDE8AO60658 829 aa14.8□□□□□ -0.04
UBA3-211ENST00000493957 C9orf131Q5VYM1 1079 aa14.8□□□□□ -0.04
UBA3-211ENST00000493957 CELF1Q92879 486 aaKnown RBP14.8□□□□□ -0.04
UBA3-211ENST00000493957 SEC31BQ9NQW1 1179 aa14.8□□□□□ -0.04
UBA3-211ENST00000493957 DUOX1Q9NRD9 1551 aa14.8□□□□□ -0.04
UBA3-211ENST00000493957 COL4A5P29400 1685 aa14.8□□□□□ -0.04
UBA3-211ENST00000493957 CCDC93Q567U6 631 aa14.79□□□□□ -0.04
UBA3-211ENST00000493957 DDX46Q7L014 1031 aaKnown RBP14.79□□□□□ -0.04
UBA3-211ENST00000493957 SRCIN1Q9C0H9 1055 aa14.79□□□□□ -0.04
UBA3-211ENST00000493957 RNF181Q9P0P0 153 aa14.79□□□□□ -0.04
UBA3-211ENST00000493957 BRPF1P55201 1214 aaPredicted RBP14.78□□□□□ -0.04
UBA3-211ENST00000493957 CTSWP56202 376 aa14.78□□□□□ -0.04
UBA3-211ENST00000493957 GRAPQ13588 217 aa14.78□□□□□ -0.04
UBA3-211ENST00000493957 GRAPLQ8TC17 118 aaPredicted RBP14.78□□□□□ -0.04
UBA3-211ENST00000493957 SLC39A7Q92504 469 aa14.78□□□□□ -0.04
UBA3-211ENST00000493957 GRM8O00222 908 aa14.77□□□□□ -0.05
UBA3-211ENST00000493957 ATMINO43313 823 aaPredicted RBP14.77□□□□□ -0.05
UBA3-211ENST00000493957 ALDH1L1O75891 902 aa14.77□□□□□ -0.05
UBA3-211ENST00000493957 C7P10643 843 aa14.77□□□□□ -0.05
UBA3-211ENST00000493957 EPHA10Q5JZY3 1008 aa14.77□□□□□ -0.05
UBA3-211ENST00000493957 TTLL11Q8NHH1 800 aa14.77□□□□□ -0.05
UBA3-211ENST00000493957 YTHDC1Q96MU7 727 aaKnown RBP14.77□□□□□ -0.05
UBA3-211ENST00000493957 TAOK3Q9H2K8 898 aa14.77□□□□□ -0.05
UBA3-211ENST00000493957 GREM2Q9H772 168 aa14.77□□□□□ -0.05
UBA3-211ENST00000493957 LTBP3Q9NS15 1303 aa14.76□□□□□ -0.05
UBA3-211ENST00000493957 MNX1P50219 401 aaPredicted RBP14.76□□□□□ -0.05
UBA3-211ENST00000493957 CCDC152Q4G0S7 254 aa14.76□□□□□ -0.05
UBA3-211ENST00000493957 LCE2DQ5TA82 110 aaPredicted RBP14.76□□□□□ -0.05
UBA3-211ENST00000493957 ZNF784Q8NCA9 323 aaPredicted RBP14.76□□□□□ -0.05
UBA3-211ENST00000493957 MS4A3Q96HJ5 214 aa14.76□□□□□ -0.05
UBA3-211ENST00000493957 PLA2G12BQ9BX93 195 aa14.76□□□□□ -0.05
UBA3-211ENST00000493957 ZNF277Q9NRM2 450 aaPredicted RBP14.76□□□□□ -0.05
UBA3-211ENST00000493957 ATP6V0A2Q9Y487 856 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms