RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 DPY19L2Q6NUT2 758 aa16.27■□□□□ 0.2
HSPG2-212ENST00000493940 PI4KAP1Q8N8J0 262 aa16.27■□□□□ 0.2
HSPG2-212ENST00000493940 CELF1Q92879 486 aaKnown RBP16.27■□□□□ 0.2
HSPG2-212ENST00000493940 METTL22Q9BUU2 404 aaPredicted RBP16.27■□□□□ 0.2
HSPG2-212ENST00000493940 MAP3K2Q9Y2U5 619 aa16.27■□□□□ 0.2
HSPG2-212ENST00000493940 IRS4O14654 1257 aaPredicted RBP16.26■□□□□ 0.19
HSPG2-212ENST00000493940 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
HSPG2-212ENST00000493940 SF3B3Q15393 1217 aaKnown RBP16.26■□□□□ 0.19
HSPG2-212ENST00000493940 ZNF521Q96K83 1311 aa16.25■□□□□ 0.19
HSPG2-212ENST00000493940 GRAPQ13588 217 aa16.25■□□□□ 0.19
HSPG2-212ENST00000493940 CC2D2BQ6DHV5 1058 aa16.25■□□□□ 0.19
HSPG2-212ENST00000493940 KSR2Q6VAB6 950 aa16.25■□□□□ 0.19
HSPG2-212ENST00000493940 SP8Q8IXZ3 490 aa16.25■□□□□ 0.19
HSPG2-212ENST00000493940 ZBTB38Q8NAP3 1195 aaPredicted RBP16.25■□□□□ 0.19
HSPG2-212ENST00000493940 GRAPLQ8TC17 118 aaPredicted RBP16.25■□□□□ 0.19
HSPG2-212ENST00000493940 SEC31BQ9NQW1 1179 aa16.25■□□□□ 0.19
HSPG2-212ENST00000493940 ADAMTSL1Q8N6G6 1762 aa16.25■□□□□ 0.19
HSPG2-212ENST00000493940 BBOX1O75936 387 aa16.24■□□□□ 0.19
HSPG2-212ENST00000493940 AOC3Q16853 763 aa16.24■□□□□ 0.19
HSPG2-212ENST00000493940 CWF19L2Q2TBE0 894 aaKnown RBP16.24■□□□□ 0.19
HSPG2-212ENST00000493940 DDX46Q7L014 1031 aaKnown RBP16.24■□□□□ 0.19
HSPG2-212ENST00000493940 CCDC191Q8NCU4 936 aa16.24■□□□□ 0.19
HSPG2-212ENST00000493940 POLR2AP24928 1970 aaKnown RBP16.24■□□□□ 0.19
HSPG2-212ENST00000493940 SCN9AQ15858 1988 aa16.24■□□□□ 0.19
HSPG2-212ENST00000493940 PCCAP05165 728 aaPredicted RBP16.23■□□□□ 0.19
HSPG2-212ENST00000493940 L3MBTL3Q96JM7 780 aaPredicted RBP16.23■□□□□ 0.19
HSPG2-212ENST00000493940 RTFDC1Q9BY42 306 aaPredicted RBP16.23■□□□□ 0.19
HSPG2-212ENST00000493940 CCDC85AQ96PX6 553 aaPredicted RBP16.22■□□□□ 0.19
HSPG2-212ENST00000493940 CWC25Q9NXE8 425 aaPredicted RBP16.22■□□□□ 0.19
HSPG2-212ENST00000493940 FLIIQ13045 1269 aa16.21■□□□□ 0.19
HSPG2-212ENST00000493940 LARGE2Q8N3Y3 721 aa16.21■□□□□ 0.19
HSPG2-212ENST00000493940 MPNDQ8N594 471 aa16.21■□□□□ 0.19
HSPG2-212ENST00000493940 GPR101Q96P66 508 aaPredicted RBP16.21■□□□□ 0.19
HSPG2-212ENST00000493940 STK31Q9BXU1 1019 aa16.21■□□□□ 0.19
HSPG2-212ENST00000493940 TAF1DQ9H5J8 278 aaPredicted RBP16.21■□□□□ 0.19
HSPG2-212ENST00000493940 WTIPA6NIX2 430 aaPredicted RBP16.2■□□□□ 0.18
HSPG2-212ENST00000493940 NEURL1BA8MQ27 555 aa16.2■□□□□ 0.18
HSPG2-212ENST00000493940 PPIP5K2O43314 1243 aa16.2■□□□□ 0.18
HSPG2-212ENST00000493940 DDX58O95786 925 aaKnown RBP16.2■□□□□ 0.18
HSPG2-212ENST00000493940 GPSM2P81274 684 aa16.2■□□□□ 0.18
HSPG2-212ENST00000493940 TNS4Q8IZW8 715 aa16.2■□□□□ 0.18
HSPG2-212ENST00000493940 POLLQ9UGP5 575 aa16.2■□□□□ 0.18
HSPG2-212ENST00000493940 YDJCA8MPS7 323 aa16.19■□□□□ 0.18
HSPG2-212ENST00000493940 F6X3S4 739 aa16.19■□□□□ 0.18
HSPG2-212ENST00000493940 PDE8AO60658 829 aa16.19■□□□□ 0.18
HSPG2-212ENST00000493940 DPP8Q6V1X1 898 aaPredicted RBP16.19■□□□□ 0.18
HSPG2-212ENST00000493940 JDP2Q8WYK2 163 aa16.19■□□□□ 0.18
HSPG2-212ENST00000493940 GJA3Q9Y6H8 435 aa16.19■□□□□ 0.18
HSPG2-212ENST00000493940 H7C1W4 665 aa16.18■□□□□ 0.18
HSPG2-212ENST00000493940 SCNN1DP51172 638 aa16.18■□□□□ 0.18
HSPG2-212ENST00000493940 CASP7P55210 303 aa16.18■□□□□ 0.18
HSPG2-212ENST00000493940 RPS8P62241 208 aaKnown RBP16.18■□□□□ 0.18
HSPG2-212ENST00000493940 CXCL9Q07325 125 aa16.18■□□□□ 0.18
HSPG2-212ENST00000493940 GRIPAP1Q4V328 841 aa16.18■□□□□ 0.18
HSPG2-212ENST00000493940 GPC2Q8N158 579 aa16.18■□□□□ 0.18
HSPG2-212ENST00000493940 CDHR2Q9BYE9 1310 aa16.18■□□□□ 0.18
HSPG2-212ENST00000493940 EPS15P42566 896 aa16.17■□□□□ 0.18
HSPG2-212ENST00000493940 KIAA2012Q0VF49 1180 aa16.17■□□□□ 0.18
HSPG2-212ENST00000493940 FKBP5Q13451 457 aaPredicted RBP16.17■□□□□ 0.18
HSPG2-212ENST00000493940 TTLL11Q8NHH1 800 aa16.17■□□□□ 0.18
HSPG2-212ENST00000493940 CDCA7LQ96GN5 454 aa16.17■□□□□ 0.18
HSPG2-212ENST00000493940 KCNQ5Q9NR82 932 aa16.17■□□□□ 0.18
HSPG2-212ENST00000493940 NSFL1CQ9UNZ2 370 aaKnown RBP16.17■□□□□ 0.18
HSPG2-212ENST00000493940 ZNF646O15015 1829 aaPredicted RBP16.17■□□□□ 0.18
HSPG2-212ENST00000493940 PSME4Q14997 1843 aa16.17■□□□□ 0.18
HSPG2-212ENST00000493940 A0A1B0GUL6 1792 aa16.16■□□□□ 0.18
HSPG2-212ENST00000493940 HSPA1AP0DMV8 641 aaKnown RBP16.16■□□□□ 0.18
HSPG2-212ENST00000493940 HSPA1BP0DMV9 641 aaKnown RBP16.16■□□□□ 0.18
HSPG2-212ENST00000493940 EPHX2P34913 555 aa16.16■□□□□ 0.18
HSPG2-212ENST00000493940 GCKRQ14397 625 aa16.16■□□□□ 0.18
HSPG2-212ENST00000493940 CHADLQ6NUI6 762 aa16.16■□□□□ 0.18
HSPG2-212ENST00000493940 DNAAF4Q8WXU2 420 aa16.16■□□□□ 0.18
HSPG2-212ENST00000493940 CHMP4AQ9BY43 222 aa16.16■□□□□ 0.18
HSPG2-212ENST00000493940 HACL1Q9UJ83 578 aa16.16■□□□□ 0.18
HSPG2-212ENST00000493940 SHTN1A0MZ66 631 aa16.15■□□□□ 0.18
HSPG2-212ENST00000493940 RIMBP2O15034 1052 aa16.15■□□□□ 0.18
HSPG2-212ENST00000493940 ITGBL1O95965 494 aaPredicted RBP16.15■□□□□ 0.18
HSPG2-212ENST00000493940 EIF6P56537 245 aaKnown RBP16.15■□□□□ 0.18
HSPG2-212ENST00000493940 EAPPQ56P03 285 aaPredicted RBP16.15■□□□□ 0.18
HSPG2-212ENST00000493940 UBE3BQ7Z3V4 1068 aa16.15■□□□□ 0.18
HSPG2-212ENST00000493940 NIM1KQ8IY84 436 aa16.15■□□□□ 0.18
HSPG2-212ENST00000493940 VPS33BQ9H267 617 aa16.15■□□□□ 0.18
HSPG2-212ENST00000493940 GREM2Q9H772 168 aa16.15■□□□□ 0.18
HSPG2-212ENST00000493940 ZNRF3Q9ULT6 936 aa16.15■□□□□ 0.18
HSPG2-212ENST00000493940 TRPM7Q96QT4 1865 aa16.14■□□□□ 0.17
HSPG2-212ENST00000493940 RAD17O75943 681 aa16.14■□□□□ 0.17
HSPG2-212ENST00000493940 CTSWP56202 376 aa16.14■□□□□ 0.17
HSPG2-212ENST00000493940 FMR1Q06787 632 aaKnown RBP eCLIP16.14■□□□□ 0.17
HSPG2-212ENST00000493940 TBC1D16Q8TBP0 767 aa16.14■□□□□ 0.17
HSPG2-212ENST00000493940 MYH16Q9H6N6 1097 aa16.14■□□□□ 0.17
HSPG2-212ENST00000493940 IQCA1LA6NCM1 817 aa16.13■□□□□ 0.17
HSPG2-212ENST00000493940 CAPN15O75808 1086 aa16.13■□□□□ 0.17
HSPG2-212ENST00000493940 SLFN5Q08AF3 891 aa16.13■□□□□ 0.17
HSPG2-212ENST00000493940 NEXNQ0ZGT2 675 aa16.13■□□□□ 0.17
HSPG2-212ENST00000493940 DOK7Q18PE1 504 aa16.13■□□□□ 0.17
HSPG2-212ENST00000493940 CCDC152Q4G0S7 254 aa16.13■□□□□ 0.17
HSPG2-212ENST00000493940 BEND3Q5T5X7 828 aa16.13■□□□□ 0.17
HSPG2-212ENST00000493940 TMC4Q7Z404 712 aa16.13■□□□□ 0.17
HSPG2-212ENST00000493940 SUPT20HQ8NEM7 779 aa16.13■□□□□ 0.17
HSPG2-212ENST00000493940 LINS1Q8NG48 757 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms