RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 SF3B3Q15393 1217 aaKnown RBP9.5□□□□□ -0.89
VEGFA-214ENST00000493786 CCDC57Q2TAC2 916 aa9.5□□□□□ -0.89
VEGFA-214ENST00000493786 CRY2Q49AN0 593 aa9.5□□□□□ -0.89
VEGFA-214ENST00000493786 STYK1Q6J9G0 422 aa9.5□□□□□ -0.89
VEGFA-214ENST00000493786 LMBR1LQ6UX01 489 aa9.5□□□□□ -0.89
VEGFA-214ENST00000493786 CNKSR1Q969H4 720 aa9.5□□□□□ -0.89
VEGFA-214ENST00000493786 CCDC85AQ96PX6 553 aaPredicted RBP9.5□□□□□ -0.89
VEGFA-214ENST00000493786 CDC5LQ99459 802 aaKnown RBP9.5□□□□□ -0.89
VEGFA-214ENST00000493786 BICC1Q9H694 974 aaKnown RBP9.5□□□□□ -0.89
VEGFA-214ENST00000493786 PIM2Q9P1W9 311 aa9.5□□□□□ -0.89
VEGFA-214ENST00000493786 ANKRD18BA2A2Z9 1011 aa9.49□□□□□ -0.89
VEGFA-214ENST00000493786 IGHMBP2P38935 993 aaKnown RBP9.49□□□□□ -0.89
VEGFA-214ENST00000493786 GRAPQ13588 217 aa9.49□□□□□ -0.89
VEGFA-214ENST00000493786 AAMPQ13685 434 aa9.49□□□□□ -0.89
VEGFA-214ENST00000493786 C3orf67Q6ZVT6 689 aa9.49□□□□□ -0.89
VEGFA-214ENST00000493786 ANKRD18AQ8IVF6 992 aa9.49□□□□□ -0.89
VEGFA-214ENST00000493786 TTLL6Q8N841 843 aa9.49□□□□□ -0.89
VEGFA-214ENST00000493786 NLGN2Q8NFZ4 835 aa9.49□□□□□ -0.89
VEGFA-214ENST00000493786 TTLL11Q8NHH1 800 aa9.49□□□□□ -0.89
VEGFA-214ENST00000493786 GRAPLQ8TC17 118 aaPredicted RBP9.49□□□□□ -0.89
VEGFA-214ENST00000493786 CRBNQ96SW2 442 aa9.49□□□□□ -0.89
VEGFA-214ENST00000493786 SYT17Q9BSW7 474 aa9.49□□□□□ -0.89
VEGFA-214ENST00000493786 LAMB2P55268 1798 aa9.48□□□□□ -0.89
VEGFA-214ENST00000493786 DCAF8L1A6NGE4 600 aa9.48□□□□□ -0.89
VEGFA-214ENST00000493786 CSF1RP07333 972 aa9.48□□□□□ -0.89
VEGFA-214ENST00000493786 ITGA6P23229 1130 aa9.48□□□□□ -0.89
VEGFA-214ENST00000493786 HOXA10P31260 410 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-214ENST00000493786 IRX6P78412 446 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-214ENST00000493786 FOXO4P98177 505 aa9.48□□□□□ -0.89
VEGFA-214ENST00000493786 FAM161AQ3B820 660 aa9.48□□□□□ -0.89
VEGFA-214ENST00000493786 RABL6Q3YEC7 729 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-214ENST00000493786 DALRD3Q5D0E6 543 aaKnown RBP9.48□□□□□ -0.89
VEGFA-214ENST00000493786 PELP1Q8IZL8 1130 aaKnown RBP9.48□□□□□ -0.89
VEGFA-214ENST00000493786 CRAMP1Q96RY5 1269 aa9.48□□□□□ -0.89
VEGFA-214ENST00000493786 GREM2Q9H772 168 aa9.48□□□□□ -0.89
VEGFA-214ENST00000493786 C1orf115Q9H7X2 142 aa9.48□□□□□ -0.89
VEGFA-214ENST00000493786 ZBTB40Q9NUA8 1239 aa9.48□□□□□ -0.89
VEGFA-214ENST00000493786 TNRC6CQ9HCJ0 1690 aaKnown RBP9.48□□□□□ -0.89
VEGFA-214ENST00000493786 RTL9Q8NET4 1388 aa9.48□□□□□ -0.89
VEGFA-214ENST00000493786 SRCAPQ6ZRS2 3230 aa9.48□□□□□ -0.89
VEGFA-214ENST00000493786 KIF13BQ9NQT8 1826 aa9.47□□□□□ -0.89
VEGFA-214ENST00000493786 PPEF1O14829 653 aaPredicted RBP9.47□□□□□ -0.89
VEGFA-214ENST00000493786 SRGAP3O43295 1099 aa9.47□□□□□ -0.89
VEGFA-214ENST00000493786 HMMRO75330 724 aa9.47□□□□□ -0.89
VEGFA-214ENST00000493786 BBOX1O75936 387 aa9.47□□□□□ -0.89
VEGFA-214ENST00000493786 EPHA10Q5JZY3 1008 aa9.47□□□□□ -0.89
VEGFA-214ENST00000493786 SOGA3Q5TF21 947 aa9.47□□□□□ -0.89
VEGFA-214ENST00000493786 PRPF40BQ6NWY9 871 aaKnown RBP9.47□□□□□ -0.89
VEGFA-214ENST00000493786 TMC4Q7Z404 712 aa9.47□□□□□ -0.89
VEGFA-214ENST00000493786 ANKRD44Q8N8A2 993 aa9.47□□□□□ -0.89
VEGFA-214ENST00000493786 MPHOSPH8Q99549 860 aa9.47□□□□□ -0.89
VEGFA-214ENST00000493786 WWC3Q9ULE0 1092 aa9.47□□□□□ -0.89
VEGFA-214ENST00000493786 BCS1LQ9Y276 419 aa9.47□□□□□ -0.89
VEGFA-214ENST00000493786 DDX60Q8IY21 1712 aaKnown RBP9.47□□□□□ -0.89
VEGFA-214ENST00000493786 ANKRD31Q8N7Z5 1873 aa9.47□□□□□ -0.89
VEGFA-214ENST00000493786 RPS8P62241 208 aaKnown RBP9.46□□□□□ -0.9
VEGFA-214ENST00000493786 RPAP2Q8IXW5 612 aaPredicted RBP9.46□□□□□ -0.9
VEGFA-214ENST00000493786 KAZALD1Q96I82 304 aa9.46□□□□□ -0.9
VEGFA-214ENST00000493786 SEC31BQ9NQW1 1179 aa9.46□□□□□ -0.9
VEGFA-214ENST00000493786 KCNA3P22001 575 aa9.45□□□□□ -0.9
VEGFA-214ENST00000493786 ATP8B2P98198 1209 aa9.45□□□□□ -0.9
VEGFA-214ENST00000493786 MTX1Q13505 466 aa9.45□□□□□ -0.9
VEGFA-214ENST00000493786 GPR162Q16538 588 aa9.45□□□□□ -0.9
VEGFA-214ENST00000493786 CEP85Q6P2H3 762 aa9.45□□□□□ -0.9
VEGFA-214ENST00000493786 LDHAL6AQ6ZMR3 332 aa9.45□□□□□ -0.9
VEGFA-214ENST00000493786 EXOC6Q8TAG9 804 aa9.45□□□□□ -0.9
VEGFA-214ENST00000493786 CELF1Q92879 486 aaKnown RBP9.45□□□□□ -0.9
VEGFA-214ENST00000493786 CNNM1Q9NRU3 951 aa9.45□□□□□ -0.9
VEGFA-214ENST00000493786 ZNF219Q9P2Y4 722 aaPredicted RBP9.45□□□□□ -0.9
VEGFA-214ENST00000493786 COL11A2P13942 1736 aaPredicted RBP9.45□□□□□ -0.9
VEGFA-214ENST00000493786 MYH3P11055 1940 aa9.44□□□□□ -0.9
VEGFA-214ENST00000493786 C21orf2O43822 256 aa9.44□□□□□ -0.9
VEGFA-214ENST00000493786 OS9Q13438 667 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-214ENST00000493786 GRIPAP1Q4V328 841 aa9.44□□□□□ -0.9
VEGFA-214ENST00000493786 CCDC93Q567U6 631 aa9.44□□□□□ -0.9
VEGFA-214ENST00000493786 CC2D2BQ6DHV5 1058 aa9.44□□□□□ -0.9
VEGFA-214ENST00000493786 BSDC1Q9NW68 430 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-214ENST00000493786 ATP6V0A2Q9Y487 856 aa9.44□□□□□ -0.9
VEGFA-214ENST00000493786 PNMA6EA0A0J9YXQ4 647 aa9.43□□□□□ -0.9
VEGFA-214ENST00000493786 G3BP1Q13283 466 aaKnown RBP eCLIP9.43□□□□□ -0.9
VEGFA-214ENST00000493786 HSP90AB4PQ58FF6 505 aa9.43□□□□□ -0.9
VEGFA-214ENST00000493786 SP8Q8IXZ3 490 aa9.43□□□□□ -0.9
VEGFA-214ENST00000493786 RTKN2Q8IZC4 609 aa9.43□□□□□ -0.9
VEGFA-214ENST00000493786 ZNF594Q96JF6 807 aaPredicted RBP9.43□□□□□ -0.9
VEGFA-214ENST00000493786 ANKRD2Q9GZV1 360 aa9.43□□□□□ -0.9
VEGFA-214ENST00000493786 SIL1Q9H173 461 aa9.43□□□□□ -0.9
VEGFA-214ENST00000493786 ANKIB1Q9P2G1 1089 aa9.43□□□□□ -0.9
VEGFA-214ENST00000493786 FBXO3Q9UK99 471 aa9.43□□□□□ -0.9
VEGFA-214ENST00000493786 DLEC1Q9Y238 1755 aa9.42□□□□□ -0.9
VEGFA-214ENST00000493786 MROH5Q6ZUA9 1318 aa9.42□□□□□ -0.9
VEGFA-214ENST00000493786 GRIN3BO60391 1043 aa9.42□□□□□ -0.9
VEGFA-214ENST00000493786 SURF6O75683 361 aaKnown RBP9.42□□□□□ -0.9
VEGFA-214ENST00000493786 KCNJ4P48050 445 aa9.42□□□□□ -0.9
VEGFA-214ENST00000493786 PTPN12Q05209 780 aaKnown RBP9.42□□□□□ -0.9
VEGFA-214ENST00000493786 POLA2Q14181 598 aa9.42□□□□□ -0.9
VEGFA-214ENST00000493786 METTL24Q5JXM2 366 aa9.42□□□□□ -0.9
VEGFA-214ENST00000493786 DPP8Q6V1X1 898 aaPredicted RBP9.42□□□□□ -0.9
VEGFA-214ENST00000493786 MPNDQ8N594 471 aa9.42□□□□□ -0.9
VEGFA-214ENST00000493786 SUPT20HQ8NEM7 779 aa9.42□□□□□ -0.9
VEGFA-214ENST00000493786 KLHDC4Q8TBB5 520 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms