RNA–Protein interactions for RNA: ENST00000492367.1

NUCB1-212, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 1,515 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-212ENST00000492367 SYNE4Q8N205 404 aa23.49■■□□□ 1.35
NUCB1-212ENST00000492367 ANKRD18BA2A2Z9 1011 aa23.48■■□□□ 1.35
NUCB1-212ENST00000492367 CCDC152Q4G0S7 254 aa23.48■■□□□ 1.35
NUCB1-212ENST00000492367 CLASRPQ8N2M8 674 aaKnown RBP23.48■■□□□ 1.35
NUCB1-212ENST00000492367 SIL1Q9H173 461 aa23.48■■□□□ 1.35
NUCB1-212ENST00000492367 NPHP1O15259 732 aa23.47■■□□□ 1.35
NUCB1-212ENST00000492367 FAM161AQ3B820 660 aa23.47■■□□□ 1.35
NUCB1-212ENST00000492367 NUTM1Q86Y26 1132 aa23.47■■□□□ 1.35
NUCB1-212ENST00000492367 RTL9Q8NET4 1388 aa23.47■■□□□ 1.35
NUCB1-212ENST00000492367 MSH5O43196 834 aa23.46■■□□□ 1.35
NUCB1-212ENST00000492367 CIAO1O76071 339 aa23.46■■□□□ 1.35
NUCB1-212ENST00000492367 HCLS1P14317 486 aaPredicted RBP23.46■■□□□ 1.35
NUCB1-212ENST00000492367 NFIXQ14938 502 aa23.46■■□□□ 1.35
NUCB1-212ENST00000492367 SLC10A5Q5PT55 438 aa23.46■■□□□ 1.35
NUCB1-212ENST00000492367 SLC15A2Q16348 729 aa23.45■■□□□ 1.34
NUCB1-212ENST00000492367 ERFEQ4G0M1 354 aa23.45■■□□□ 1.34
NUCB1-212ENST00000492367 NLGN1Q8N2Q7 840 aa23.45■■□□□ 1.34
NUCB1-212ENST00000492367 KLHDC4Q8TBB5 520 aa23.45■■□□□ 1.34
NUCB1-212ENST00000492367 EYA2O00167 538 aa23.44■■□□□ 1.34
NUCB1-212ENST00000492367 ITGA6P23229 1130 aa23.44■■□□□ 1.34
NUCB1-212ENST00000492367 IL15P40933 162 aaPredicted RBP23.44■■□□□ 1.34
NUCB1-212ENST00000492367 COL23A1Q86Y22 540 aaPredicted RBP23.44■■□□□ 1.34
NUCB1-212ENST00000492367 PLEKHM2Q8IWE5 1019 aa23.44■■□□□ 1.34
NUCB1-212ENST00000492367 BCL11AQ9H165 835 aa23.44■■□□□ 1.34
NUCB1-212ENST00000492367 IL1RAPL2Q9NP60 686 aa23.44■■□□□ 1.34
NUCB1-212ENST00000492367 RIC1Q4ADV7 1423 aa23.44■■□□□ 1.34
NUCB1-212ENST00000492367 PNPLA7Q6ZV29 1317 aa23.44■■□□□ 1.34
NUCB1-212ENST00000492367 GREM2Q9H772 168 aa23.43■■□□□ 1.34
NUCB1-212ENST00000492367 CASZ1Q86V15 1759 aa23.43■■□□□ 1.34
NUCB1-212ENST00000492367 CNBD1Q8NA66 436 aa23.43■■□□□ 1.34
NUCB1-212ENST00000492367 EP400Q96L91 3159 aa23.42■■□□□ 1.34
NUCB1-212ENST00000492367 AOX1Q06278 1338 aa23.42■■□□□ 1.34
NUCB1-212ENST00000492367 SASH1O94885 1247 aa23.42■■□□□ 1.34
NUCB1-212ENST00000492367 MX1P20591 662 aa23.42■■□□□ 1.34
NUCB1-212ENST00000492367 GPATCH3Q96I76 525 aa23.42■■□□□ 1.34
NUCB1-212ENST00000492367 NLRP3Q96P20 1036 aa23.42■■□□□ 1.34
NUCB1-212ENST00000492367 CCDC85AQ96PX6 553 aaPredicted RBP23.42■■□□□ 1.34
NUCB1-212ENST00000492367 OSBPL3Q9H4L5 887 aa23.42■■□□□ 1.34
NUCB1-212ENST00000492367 LRP5O75197 1615 aa23.41■■□□□ 1.34
NUCB1-212ENST00000492367 TM4SF1P30408 202 aa23.41■■□□□ 1.34
NUCB1-212ENST00000492367 ST5P78524 1137 aa23.41■■□□□ 1.34
NUCB1-212ENST00000492367 SF3B3Q15393 1217 aaKnown RBP23.41■■□□□ 1.34
NUCB1-212ENST00000492367 BMP2KLQ5H9B9 411 aa23.41■■□□□ 1.34
NUCB1-212ENST00000492367 DEFB132Q7Z7B7 95 aa23.41■■□□□ 1.34
NUCB1-212ENST00000492367 C16orf71Q8IYS4 520 aaPredicted RBP23.41■■□□□ 1.34
NUCB1-212ENST00000492367 ABCC12Q96J65 1359 aa23.41■■□□□ 1.34
NUCB1-212ENST00000492367 SALL3Q9BXA9 1300 aa23.4■■□□□ 1.34
NUCB1-212ENST00000492367 IFIT2P09913 472 aaKnown RBP23.4■■□□□ 1.34
NUCB1-212ENST00000492367 CDC5LQ99459 802 aaKnown RBP23.4■■□□□ 1.34
NUCB1-212ENST00000492367 SERPINB2P05120 415 aa23.39■■□□□ 1.34
NUCB1-212ENST00000492367 PDE1AP54750 535 aa23.39■■□□□ 1.34
NUCB1-212ENST00000492367 ZNF594Q96JF6 807 aaPredicted RBP23.39■■□□□ 1.34
NUCB1-212ENST00000492367 ANO8Q9HCE9 1232 aaPredicted RBP23.39■■□□□ 1.34
NUCB1-212ENST00000492367 GPR108Q9NPR9 543 aa23.39■■□□□ 1.34
NUCB1-212ENST00000492367 STAP2Q9UGK3 403 aa23.39■■□□□ 1.34
NUCB1-212ENST00000492367 TTC22Q5TAA0 569 aa23.38■■□□□ 1.33
NUCB1-212ENST00000492367 LDHAL6AQ6ZMR3 332 aa23.38■■□□□ 1.33
NUCB1-212ENST00000492367 ATG9AQ7Z3C6 839 aa23.38■■□□□ 1.33
NUCB1-212ENST00000492367 AACSQ86V21 672 aa23.38■■□□□ 1.33
NUCB1-212ENST00000492367 TTC41PQ6P2S7 1318 aa23.38■■□□□ 1.33
NUCB1-212ENST00000492367 IGHMBP2P38935 993 aaKnown RBP23.38■■□□□ 1.33
NUCB1-212ENST00000492367 TFCP2Q12800 502 aa23.38■■□□□ 1.33
NUCB1-212ENST00000492367 OTUD7AQ8TE49 926 aaPredicted RBP23.38■■□□□ 1.33
NUCB1-212ENST00000492367 CNNM1Q9NRU3 951 aa23.38■■□□□ 1.33
NUCB1-212ENST00000492367 CEP126Q9P2H0 1117 aa23.38■■□□□ 1.33
NUCB1-212ENST00000492367 MPHOSPH8Q99549 860 aa23.37■■□□□ 1.33
NUCB1-212ENST00000492367 POLRMTO00411 1230 aaKnown RBP23.36■■□□□ 1.33
NUCB1-212ENST00000492367 ERC2O15083 957 aa23.36■■□□□ 1.33
NUCB1-212ENST00000492367 LRRC24Q50LG9 513 aa23.36■■□□□ 1.33
NUCB1-212ENST00000492367 TNNI3KQ59H18 835 aa23.36■■□□□ 1.33
NUCB1-212ENST00000492367 PRR5LQ6MZQ0 368 aa23.36■■□□□ 1.33
NUCB1-212ENST00000492367 AKAP2Q9Y2D5 859 aa23.36■■□□□ 1.33
NUCB1-212ENST00000492367 FPGT-TNNI3KV9GXZ4 949 aa23.36■■□□□ 1.33
NUCB1-212ENST00000492367 NRXN2Q9P2S2 1712 aa23.35■■□□□ 1.33
NUCB1-212ENST00000492367 TNRC6CQ9HCJ0 1690 aaKnown RBP23.34■■□□□ 1.33
NUCB1-212ENST00000492367 PUS3Q9BZE2 481 aaKnown RBP23.34■■□□□ 1.33
NUCB1-212ENST00000492367 PARP3Q9Y6F1 533 aa23.34■■□□□ 1.33
NUCB1-212ENST00000492367 SPEF2Q9C093 1822 aa23.34■■□□□ 1.33
NUCB1-212ENST00000492367 MROH5Q6ZUA9 1318 aa23.34■■□□□ 1.33
NUCB1-212ENST00000492367 DDR1Q08345 913 aa23.33■■□□□ 1.33
NUCB1-212ENST00000492367 METTL24Q5JXM2 366 aa23.33■■□□□ 1.33
NUCB1-212ENST00000492367 ANKRD18AQ8IVF6 992 aa23.33■■□□□ 1.33
NUCB1-212ENST00000492367 EAF2Q96CJ1 260 aaPredicted RBP23.33■■□□□ 1.33
NUCB1-212ENST00000492367 BACH2Q9BYV9 841 aa23.33■■□□□ 1.33
NUCB1-212ENST00000492367 ECHDC1Q9NTX5 307 aa23.33■■□□□ 1.33
NUCB1-212ENST00000492367 SEC31BQ9NQW1 1179 aa23.33■■□□□ 1.32
NUCB1-212ENST00000492367 RIPOR2Q9Y4F9 1068 aa23.33■■□□□ 1.32
NUCB1-212ENST00000492367 ZNF609O15014 1411 aa23.32■■□□□ 1.32
NUCB1-212ENST00000492367 GLRX3O76003 335 aaKnown RBP23.32■■□□□ 1.32
NUCB1-212ENST00000492367 C8orf34Q49A92 452 aa23.32■■□□□ 1.32
NUCB1-212ENST00000492367 DDX46Q7L014 1031 aaKnown RBP23.32■■□□□ 1.32
NUCB1-212ENST00000492367 EIF5BO60841 1220 aaKnown RBP23.3■■□□□ 1.32
NUCB1-212ENST00000492367 GSPT1P15170 499 aaKnown RBP23.3■■□□□ 1.32
NUCB1-212ENST00000492367 C3orf67Q6ZVT6 689 aa23.3■■□□□ 1.32
NUCB1-212ENST00000492367 CCDC8Q9H0W5 538 aaPredicted RBP23.3■■□□□ 1.32
NUCB1-212ENST00000492367 MMP10P09238 476 aa23.29■■□□□ 1.32
NUCB1-212ENST00000492367 SLC16A10Q8TF71 515 aa23.29■■□□□ 1.32
NUCB1-212ENST00000492367 CCDC24Q8N4L8 307 aa23.28■■□□□ 1.32
NUCB1-212ENST00000492367 RPGRQ92834 1020 aaKnown RBP23.28■■□□□ 1.32
NUCB1-212ENST00000492367 A0A1B0GUL7 405 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms