RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 ABCC12Q96J65 1359 aa17.16■□□□□ 0.34
DNMT3A-214ENST00000491288 FZD9O00144 591 aa17.16■□□□□ 0.34
DNMT3A-214ENST00000491288 SLC10A5Q5PT55 438 aa17.16■□□□□ 0.34
DNMT3A-214ENST00000491288 PSMD1Q99460 953 aa17.16■□□□□ 0.34
DNMT3A-214ENST00000491288 BCL2L13Q9BXK5 485 aa17.16■□□□□ 0.34
DNMT3A-214ENST00000491288 TAF1DQ9H5J8 278 aaPredicted RBP17.16■□□□□ 0.34
DNMT3A-214ENST00000491288 ZNF277Q9NRM2 450 aaPredicted RBP17.16■□□□□ 0.34
DNMT3A-214ENST00000491288 CREBZFQ9NS37 354 aa17.16■□□□□ 0.34
DNMT3A-214ENST00000491288 PASKQ96RG2 1323 aa17.16■□□□□ 0.34
DNMT3A-214ENST00000491288 CCDC88AQ3V6T2 1871 aa17.16■□□□□ 0.34
DNMT3A-214ENST00000491288 CC2D2BQ6DHV5 1058 aa17.15■□□□□ 0.34
DNMT3A-214ENST00000491288 FAM89AQ96GI7 184 aa17.15■□□□□ 0.34
DNMT3A-214ENST00000491288 PTPRCP08575 1304 aa17.15■□□□□ 0.34
DNMT3A-214ENST00000491288 ANKRD36CQ5JPF3 1778 aa17.15■□□□□ 0.34
DNMT3A-214ENST00000491288 RARSP54136 660 aaKnown RBP17.14■□□□□ 0.33
DNMT3A-214ENST00000491288 RTL5Q5HYW3 569 aaPredicted RBP17.14■□□□□ 0.33
DNMT3A-214ENST00000491288 SLC4A10Q6U841 1118 aa17.14■□□□□ 0.33
DNMT3A-214ENST00000491288 LDHDQ86WU2 507 aa17.14■□□□□ 0.33
DNMT3A-214ENST00000491288 LINS1Q8NG48 757 aa17.14■□□□□ 0.33
DNMT3A-214ENST00000491288 RPGRQ92834 1020 aaKnown RBP17.14■□□□□ 0.33
DNMT3A-214ENST00000491288 YTHDC1Q96MU7 727 aaKnown RBP17.14■□□□□ 0.33
DNMT3A-214ENST00000491288 ZNF541Q9H0D2 1346 aa17.14■□□□□ 0.33
DNMT3A-214ENST00000491288 F6X3S4 739 aa17.13■□□□□ 0.33
DNMT3A-214ENST00000491288 IPO8O15397 1037 aaKnown RBP17.13■□□□□ 0.33
DNMT3A-214ENST00000491288 ITGBL1O95965 494 aaPredicted RBP17.13■□□□□ 0.33
DNMT3A-214ENST00000491288 IARSP41252 1262 aaKnown RBP17.13■□□□□ 0.33
DNMT3A-214ENST00000491288 SYNE4Q8N205 404 aa17.13■□□□□ 0.33
DNMT3A-214ENST00000491288 ZBTB38Q8NAP3 1195 aaPredicted RBP17.13■□□□□ 0.33
DNMT3A-214ENST00000491288 NEURL1BA8MQ27 555 aa17.12■□□□□ 0.33
DNMT3A-214ENST00000491288 IRS4O14654 1257 aaPredicted RBP17.12■□□□□ 0.33
DNMT3A-214ENST00000491288 PCCAP05165 728 aaPredicted RBP17.12■□□□□ 0.33
DNMT3A-214ENST00000491288 IGKV5-2P06315 115 aa17.12■□□□□ 0.33
DNMT3A-214ENST00000491288 HCLS1P14317 486 aaPredicted RBP17.12■□□□□ 0.33
DNMT3A-214ENST00000491288 CWF19L2Q2TBE0 894 aaKnown RBP17.12■□□□□ 0.33
DNMT3A-214ENST00000491288 GRIPAP1Q4V328 841 aa17.12■□□□□ 0.33
DNMT3A-214ENST00000491288 RBM17Q96I25 401 aaKnown RBP17.12■□□□□ 0.33
DNMT3A-214ENST00000491288 CRAMP1Q96RY5 1269 aa17.12■□□□□ 0.33
DNMT3A-214ENST00000491288 NOB1Q9ULX3 412 aaKnown RBP17.12■□□□□ 0.33
DNMT3A-214ENST00000491288 BRPF1P55201 1214 aaPredicted RBP17.11■□□□□ 0.33
DNMT3A-214ENST00000491288 GPC2Q8N158 579 aa17.11■□□□□ 0.33
DNMT3A-214ENST00000491288 API5Q9BZZ5 524 aaKnown RBP17.11■□□□□ 0.33
DNMT3A-214ENST00000491288 SRCIN1Q9C0H9 1055 aa17.11■□□□□ 0.33
DNMT3A-214ENST00000491288 HSPA1AP0DMV8 641 aaKnown RBP17.1■□□□□ 0.33
DNMT3A-214ENST00000491288 HSPA1BP0DMV9 641 aaKnown RBP17.1■□□□□ 0.33
DNMT3A-214ENST00000491288 GCKRQ14397 625 aa17.1■□□□□ 0.33
DNMT3A-214ENST00000491288 TMX4Q9H1E5 349 aaPredicted RBP17.1■□□□□ 0.33
DNMT3A-214ENST00000491288 C9orf78Q9NZ63 289 aaPredicted RBP17.1■□□□□ 0.33
DNMT3A-214ENST00000491288 HACL1Q9UJ83 578 aa17.1■□□□□ 0.33
DNMT3A-214ENST00000491288 KIF16BQ96L93 1317 aa17.1■□□□□ 0.33
DNMT3A-214ENST00000491288 ALDH1L1O75891 902 aa17.09■□□□□ 0.33
DNMT3A-214ENST00000491288 BEND3Q5T5X7 828 aa17.09■□□□□ 0.33
DNMT3A-214ENST00000491288 C3orf67Q6ZVT6 689 aa17.09■□□□□ 0.33
DNMT3A-214ENST00000491288 DDX46Q7L014 1031 aaKnown RBP17.09■□□□□ 0.33
DNMT3A-214ENST00000491288 PNMA8AQ86V59 439 aaPredicted RBP17.09■□□□□ 0.33
DNMT3A-214ENST00000491288 JARID2Q92833 1246 aaPredicted RBP17.09■□□□□ 0.33
DNMT3A-214ENST00000491288 FRAT1Q92837 279 aaPredicted RBP17.09■□□□□ 0.33
DNMT3A-214ENST00000491288 SCN4AP35499 1836 aa17.09■□□□□ 0.33
DNMT3A-214ENST00000491288 COL4A5P29400 1685 aa17.08■□□□□ 0.32
DNMT3A-214ENST00000491288 PDE8AO60658 829 aa17.08■□□□□ 0.32
DNMT3A-214ENST00000491288 EPHX2P34913 555 aa17.08■□□□□ 0.32
DNMT3A-214ENST00000491288 ARHGAP45Q92619 1136 aa17.08■□□□□ 0.32
DNMT3A-214ENST00000491288 ADAMTSL1Q8N6G6 1762 aa17.07■□□□□ 0.32
DNMT3A-214ENST00000491288 CNTNAP1P78357 1384 aa17.07■□□□□ 0.32
DNMT3A-214ENST00000491288 H7C1W4 665 aa17.07■□□□□ 0.32
DNMT3A-214ENST00000491288 BCAR3O75815 825 aa17.07■□□□□ 0.32
DNMT3A-214ENST00000491288 UBE3BQ7Z3V4 1068 aa17.07■□□□□ 0.32
DNMT3A-214ENST00000491288 JDP2Q8WYK2 163 aa17.07■□□□□ 0.32
DNMT3A-214ENST00000491288 CDHR2Q9BYE9 1310 aa17.06■□□□□ 0.32
DNMT3A-214ENST00000491288 CCT4P50991 539 aaKnown RBP17.06■□□□□ 0.32
DNMT3A-214ENST00000491288 SF3B3Q15393 1217 aaKnown RBP17.06■□□□□ 0.32
DNMT3A-214ENST00000491288 VPS33BQ9H267 617 aa17.06■□□□□ 0.32
DNMT3A-214ENST00000491288 MKRN1Q9UHC7 482 aaKnown RBP17.06■□□□□ 0.32
DNMT3A-214ENST00000491288 CACNA1SQ13698 1873 aa17.05■□□□□ 0.32
DNMT3A-214ENST00000491288 TMEM88BA6NKF7 163 aa17.05■□□□□ 0.32
DNMT3A-214ENST00000491288 BBOX1O75936 387 aa17.05■□□□□ 0.32
DNMT3A-214ENST00000491288 CCDC152Q4G0S7 254 aa17.05■□□□□ 0.32
DNMT3A-214ENST00000491288 SLC51AQ86UW1 340 aa17.05■□□□□ 0.32
DNMT3A-214ENST00000491288 GRM8O00222 908 aa17.04■□□□□ 0.32
DNMT3A-214ENST00000491288 PPEF1O14829 653 aaPredicted RBP17.04■□□□□ 0.32
DNMT3A-214ENST00000491288 SCNN1DP51172 638 aa17.04■□□□□ 0.32
DNMT3A-214ENST00000491288 ZKSCAN2Q63HK3 967 aa17.04■□□□□ 0.32
DNMT3A-214ENST00000491288 RTFDC1Q9BY42 306 aaPredicted RBP17.04■□□□□ 0.32
DNMT3A-214ENST00000491288 ATP6V0A2Q9Y487 856 aa17.04■□□□□ 0.32
DNMT3A-214ENST00000491288 EIF6P56537 245 aaKnown RBP17.03■□□□□ 0.32
DNMT3A-214ENST00000491288 EAPPQ56P03 285 aaPredicted RBP17.03■□□□□ 0.32
DNMT3A-214ENST00000491288 TNS4Q8IZW8 715 aa17.03■□□□□ 0.32
DNMT3A-214ENST00000491288 CNTROBQ8N137 903 aa17.03■□□□□ 0.32
DNMT3A-214ENST00000491288 HDAC5Q9UQL6 1122 aa17.03■□□□□ 0.32
DNMT3A-214ENST00000491288 RASSF10A6NK89 507 aa17.02■□□□□ 0.32
DNMT3A-214ENST00000491288 ATF7IPQ6VMQ6 1270 aa17.02■□□□□ 0.32
DNMT3A-214ENST00000491288 LARGE2Q8N3Y3 721 aa17.02■□□□□ 0.32
DNMT3A-214ENST00000491288 RCAN3Q9UKA8 241 aa17.02■□□□□ 0.32
DNMT3A-214ENST00000491288 ABCC4O15439 1325 aa17.01■□□□□ 0.31
DNMT3A-214ENST00000491288 MS4A1P11836 297 aa17.01■□□□□ 0.31
DNMT3A-214ENST00000491288 VEGFBP49765 207 aa17.01■□□□□ 0.31
DNMT3A-214ENST00000491288 CTSWP56202 376 aa17.01■□□□□ 0.31
DNMT3A-214ENST00000491288 GRAPQ13588 217 aa17.01■□□□□ 0.31
DNMT3A-214ENST00000491288 MAP1SQ66K74 1059 aaPredicted RBP17.01■□□□□ 0.31
DNMT3A-214ENST00000491288 TMC4Q7Z404 712 aa17.01■□□□□ 0.31
DNMT3A-214ENST00000491288 GRAPLQ8TC17 118 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms