RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 METTL22Q9BUU2 404 aaPredicted RBP23.2■■□□□ 1.3
HMGN1-219ENST00000491183 PPIP5K2O43314 1243 aa23.19■■□□□ 1.3
HMGN1-219ENST00000491183 EIF6P56537 245 aaKnown RBP23.19■■□□□ 1.3
HMGN1-219ENST00000491183 MPNDQ8N594 471 aa23.19■■□□□ 1.3
HMGN1-219ENST00000491183 CCDC191Q8NCU4 936 aa23.19■■□□□ 1.3
HMGN1-219ENST00000491183 CELF1Q92879 486 aaKnown RBP23.19■■□□□ 1.3
HMGN1-219ENST00000491183 VPS33BQ9H267 617 aa23.19■■□□□ 1.3
HMGN1-219ENST00000491183 HACL1Q9UJ83 578 aa23.19■■□□□ 1.3
HMGN1-219ENST00000491183 COL4A1P02462 1669 aa23.19■■□□□ 1.3
HMGN1-219ENST00000491183 DDX58O95786 925 aaKnown RBP23.18■■□□□ 1.3
HMGN1-219ENST00000491183 DPP8Q6V1X1 898 aaPredicted RBP23.18■■□□□ 1.3
HMGN1-219ENST00000491183 G2E3Q7L622 706 aa23.18■■□□□ 1.3
HMGN1-219ENST00000491183 WDR63Q8IWG1 891 aa23.18■■□□□ 1.3
HMGN1-219ENST00000491183 MAP3K2Q9Y2U5 619 aa23.18■■□□□ 1.3
HMGN1-219ENST00000491183 EPHX2P34913 555 aa23.17■■□□□ 1.3
HMGN1-219ENST00000491183 KSR2Q6VAB6 950 aa23.17■■□□□ 1.3
HMGN1-219ENST00000491183 NIM1KQ8IY84 436 aa23.17■■□□□ 1.3
HMGN1-219ENST00000491183 FAM9BQ8IZU0 186 aa23.17■■□□□ 1.3
HMGN1-219ENST00000491183 SUPT20HQ8NEM7 779 aa23.17■■□□□ 1.3
HMGN1-219ENST00000491183 JARID2Q92833 1246 aaPredicted RBP23.17■■□□□ 1.3
HMGN1-219ENST00000491183 KLRG1Q96E93 195 aa23.17■■□□□ 1.3
HMGN1-219ENST00000491183 GJA3Q9Y6H8 435 aa23.17■■□□□ 1.3
HMGN1-219ENST00000491183 FANCIQ9NVI1 1328 aa23.16■■□□□ 1.3
HMGN1-219ENST00000491183 PI4KAP2A4QPH2 592 aa23.16■■□□□ 1.3
HMGN1-219ENST00000491183 PCCAP05165 728 aaPredicted RBP23.16■■□□□ 1.3
HMGN1-219ENST00000491183 TMC4Q7Z404 712 aa23.16■■□□□ 1.3
HMGN1-219ENST00000491183 LDHDQ86WU2 507 aa23.16■■□□□ 1.3
HMGN1-219ENST00000491183 PI4KAP1Q8N8J0 262 aa23.16■■□□□ 1.3
HMGN1-219ENST00000491183 STK31Q9BXU1 1019 aa23.16■■□□□ 1.3
HMGN1-219ENST00000491183 CWC25Q9NXE8 425 aaPredicted RBP23.16■■□□□ 1.3
HMGN1-219ENST00000491183 LRRC37AA6NMS7 1700 aa23.16■■□□□ 1.3
HMGN1-219ENST00000491183 SLC4A2P04920 1241 aa23.15■■□□□ 1.3
HMGN1-219ENST00000491183 EAPPQ56P03 285 aaPredicted RBP23.15■■□□□ 1.3
HMGN1-219ENST00000491183 LTBP1Q14766 1721 aa23.14■■□□□ 1.3
HMGN1-219ENST00000491183 IGKV5-2P06315 115 aa23.14■■□□□ 1.29
HMGN1-219ENST00000491183 SPINK5Q9NQ38 1064 aaPredicted RBP23.14■■□□□ 1.29
HMGN1-219ENST00000491183 ADAMTSL1Q8N6G6 1762 aa23.14■■□□□ 1.29
HMGN1-219ENST00000491183 VAMP4O75379 141 aa23.13■■□□□ 1.29
HMGN1-219ENST00000491183 SCNN1DP51172 638 aa23.13■■□□□ 1.29
HMGN1-219ENST00000491183 KIAA2012Q0VF49 1180 aa23.13■■□□□ 1.29
HMGN1-219ENST00000491183 SEC31BQ9NQW1 1179 aa23.13■■□□□ 1.29
HMGN1-219ENST00000491183 ZNRF3Q9ULT6 936 aa23.13■■□□□ 1.29
HMGN1-219ENST00000491183 DUOX1Q9NRD9 1551 aa23.13■■□□□ 1.29
HMGN1-219ENST00000491183 RPS8P62241 208 aaKnown RBP23.12■■□□□ 1.29
HMGN1-219ENST00000491183 EXOSC9Q06265 439 aaKnown RBP23.12■■□□□ 1.29
HMGN1-219ENST00000491183 CXCL9Q07325 125 aa23.12■■□□□ 1.29
HMGN1-219ENST00000491183 PDE8AO60658 829 aa23.11■■□□□ 1.29
HMGN1-219ENST00000491183 ITGBL1O95965 494 aaPredicted RBP23.11■■□□□ 1.29
HMGN1-219ENST00000491183 EPS15P42566 896 aa23.11■■□□□ 1.29
HMGN1-219ENST00000491183 PNMA8AQ86V59 439 aaPredicted RBP23.11■■□□□ 1.29
HMGN1-219ENST00000491183 JMYQ8N9B5 988 aa23.11■■□□□ 1.29
HMGN1-219ENST00000491183 NSFL1CQ9UNZ2 370 aaKnown RBP23.11■■□□□ 1.29
HMGN1-219ENST00000491183 CLEC11AQ9Y240 323 aa23.11■■□□□ 1.29
HMGN1-219ENST00000491183 PASKQ96RG2 1323 aa23.1■■□□□ 1.29
HMGN1-219ENST00000491183 HSP90B1P14625 803 aaKnown RBP23.1■■□□□ 1.29
HMGN1-219ENST00000491183 GPSM2P81274 684 aa23.1■■□□□ 1.29
HMGN1-219ENST00000491183 CWF19L2Q2TBE0 894 aaKnown RBP23.09■■□□□ 1.29
HMGN1-219ENST00000491183 POLLQ9UGP5 575 aa23.09■■□□□ 1.29
HMGN1-219ENST00000491183 CDHR2Q9BYE9 1310 aa23.08■■□□□ 1.29
HMGN1-219ENST00000491183 NEURL1BA8MQ27 555 aa23.08■■□□□ 1.29
HMGN1-219ENST00000491183 LMOD1P29536 600 aaPredicted RBP23.08■■□□□ 1.29
HMGN1-219ENST00000491183 FLIIQ13045 1269 aa23.08■■□□□ 1.29
HMGN1-219ENST00000491183 CCDC85AQ96PX6 553 aaPredicted RBP23.08■■□□□ 1.29
HMGN1-219ENST00000491183 CACNA1FO60840 1977 aa23.08■■□□□ 1.29
HMGN1-219ENST00000491183 YDJCA8MPS7 323 aa23.07■■□□□ 1.28
HMGN1-219ENST00000491183 NEXNQ0ZGT2 675 aa23.07■■□□□ 1.28
HMGN1-219ENST00000491183 CCDC152Q4G0S7 254 aa23.07■■□□□ 1.28
HMGN1-219ENST00000491183 MAP1SQ66K74 1059 aaPredicted RBP23.07■■□□□ 1.28
HMGN1-219ENST00000491183 CIAPIN1Q6FI81 312 aa23.07■■□□□ 1.28
HMGN1-219ENST00000491183 RAD17O75943 681 aa23.06■■□□□ 1.28
HMGN1-219ENST00000491183 WASHC4Q2M389 1173 aa23.06■■□□□ 1.28
HMGN1-219ENST00000491183 CNTROBQ8N137 903 aa23.06■■□□□ 1.28
HMGN1-219ENST00000491183 CREBZFQ9NS37 354 aa23.06■■□□□ 1.28
HMGN1-219ENST00000491183 GPRC5DQ9NZD1 345 aa23.06■■□□□ 1.28
HMGN1-219ENST00000491183 C6orf229H3BNL8 230 aa23.05■■□□□ 1.28
HMGN1-219ENST00000491183 H7C1W4 665 aa23.05■■□□□ 1.28
HMGN1-219ENST00000491183 RIMBP2O15034 1052 aa23.05■■□□□ 1.28
HMGN1-219ENST00000491183 TBC1D16Q8TBP0 767 aa23.05■■□□□ 1.28
HMGN1-219ENST00000491183 GMPSP49915 693 aaPredicted RBP23.04■■□□□ 1.28
HMGN1-219ENST00000491183 CTSWP56202 376 aa23.04■■□□□ 1.28
HMGN1-219ENST00000491183 FKBP5Q13451 457 aaPredicted RBP23.04■■□□□ 1.28
HMGN1-219ENST00000491183 TTLL11Q8NHH1 800 aa23.04■■□□□ 1.28
HMGN1-219ENST00000491183 GPR101Q96P66 508 aaPredicted RBP23.04■■□□□ 1.28
HMGN1-219ENST00000491183 TNIP1Q15025 636 aa23.03■■□□□ 1.28
HMGN1-219ENST00000491183 USP50Q70EL3 339 aaPredicted RBP23.03■■□□□ 1.28
HMGN1-219ENST00000491183 DNAAF4Q8WXU2 420 aa23.03■■□□□ 1.28
HMGN1-219ENST00000491183 MYH16Q9H6N6 1097 aa23.03■■□□□ 1.28
HMGN1-219ENST00000491183 PODXL2Q9NZ53 605 aa23.03■■□□□ 1.28
HMGN1-219ENST00000491183 ZNF521Q96K83 1311 aa23.03■■□□□ 1.28
HMGN1-219ENST00000491183 GCKRQ14397 625 aa23.02■■□□□ 1.28
HMGN1-219ENST00000491183 UBE3BQ7Z3V4 1068 aa23.02■■□□□ 1.28
HMGN1-219ENST00000491183 DBNDD1Q9H9R9 158 aa23.02■■□□□ 1.28
HMGN1-219ENST00000491183 MYH3P11055 1940 aa23.02■■□□□ 1.28
HMGN1-219ENST00000491183 DOK7Q18PE1 504 aa23.01■■□□□ 1.27
HMGN1-219ENST00000491183 ANKRD18AQ8IVF6 992 aa23.01■■□□□ 1.27
HMGN1-219ENST00000491183 EYA3Q99504 573 aa23.01■■□□□ 1.27
HMGN1-219ENST00000491183 ADARB2Q9NS39 739 aaKnown RBP23.01■■□□□ 1.27
HMGN1-219ENST00000491183 TMEM88BA6NKF7 163 aa23■■□□□ 1.27
HMGN1-219ENST00000491183 CASP7P55210 303 aa23■■□□□ 1.27
HMGN1-219ENST00000491183 LINS1Q8NG48 757 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms