RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 TPCN1Q9ULQ1 816 aa22.85■■□□□ 1.25
SNAPC3-206ENST00000490969 ZNF165P49910 485 aa22.85■■□□□ 1.25
SNAPC3-206ENST00000490969 BBXQ8WY36 941 aaPredicted RBP22.85■■□□□ 1.25
SNAPC3-206ENST00000490969 SRGAP3O43295 1099 aa22.84■■□□□ 1.25
SNAPC3-206ENST00000490969 PDCP20941 246 aa22.84■■□□□ 1.25
SNAPC3-206ENST00000490969 KRT222Q8N1A0 295 aa22.84■■□□□ 1.25
SNAPC3-206ENST00000490969 DDX54Q8TDD1 881 aaKnown RBP22.84■■□□□ 1.25
SNAPC3-206ENST00000490969 SPATA32Q96LK8 384 aa22.84■■□□□ 1.25
SNAPC3-206ENST00000490969 NLRP2Q9NX02 1062 aa22.84■■□□□ 1.25
SNAPC3-206ENST00000490969 NCAPD2Q15021 1401 aa22.84■■□□□ 1.25
SNAPC3-206ENST00000490969 TERF2Q15554 542 aa22.84■■□□□ 1.25
SNAPC3-206ENST00000490969 MPRIPQ6WCQ1 1025 aa22.84■■□□□ 1.25
SNAPC3-206ENST00000490969 ZNF397Q8NF99 534 aaPredicted RBP22.84■■□□□ 1.25
SNAPC3-206ENST00000490969 GLRX3O76003 335 aaKnown RBP22.83■■□□□ 1.25
SNAPC3-206ENST00000490969 CDC25BP30305 580 aa22.83■■□□□ 1.25
SNAPC3-206ENST00000490969 ZNF530Q6P9A1 599 aaPredicted RBP22.83■■□□□ 1.25
SNAPC3-206ENST00000490969 DNAJC25Q9H1X3 360 aa22.83■■□□□ 1.25
SNAPC3-206ENST00000490969 LRRC37A3O60309 1634 aa22.83■■□□□ 1.25
SNAPC3-206ENST00000490969 USP42Q9H9J4 1324 aaKnown RBP22.83■■□□□ 1.25
SNAPC3-206ENST00000490969 TTC41PQ6P2S7 1318 aa22.83■■□□□ 1.24
SNAPC3-206ENST00000490969 GTF2E1P29083 439 aaPredicted RBP22.82■■□□□ 1.24
SNAPC3-206ENST00000490969 NECTIN1Q15223 517 aa22.82■■□□□ 1.24
SNAPC3-206ENST00000490969 KMT5BQ4FZB7 885 aa22.82■■□□□ 1.24
SNAPC3-206ENST00000490969 HTATSF1O43719 755 aaKnown RBP22.82■■□□□ 1.24
SNAPC3-206ENST00000490969 ZKSCAN1P17029 563 aaPredicted RBP22.82■■□□□ 1.24
SNAPC3-206ENST00000490969 LEO1Q8WVC0 666 aaPredicted RBP22.82■■□□□ 1.24
SNAPC3-206ENST00000490969 TFIP11Q9UBB9 837 aaKnown RBP22.82■■□□□ 1.24
SNAPC3-206ENST00000490969 BCL11BQ9C0K0 894 aaPredicted RBP22.81■■□□□ 1.24
SNAPC3-206ENST00000490969 ZNF215Q9UL58 517 aaPredicted RBP22.81■■□□□ 1.24
SNAPC3-206ENST00000490969 LRRC8AQ8IWT6 810 aa22.81■■□□□ 1.24
SNAPC3-206ENST00000490969 NR1I2O75469 434 aa22.8■■□□□ 1.24
SNAPC3-206ENST00000490969 TMEM51Q9NW97 253 aa22.8■■□□□ 1.24
SNAPC3-206ENST00000490969 USP27XA6NNY8 438 aa22.8■■□□□ 1.24
SNAPC3-206ENST00000490969 KCNQ3O43525 872 aa22.8■■□□□ 1.24
SNAPC3-206ENST00000490969 CAMTA1Q9Y6Y1 1673 aa22.8■■□□□ 1.24
SNAPC3-206ENST00000490969 RBM6P78332 1123 aaKnown RBP22.79■■□□□ 1.24
SNAPC3-206ENST00000490969 CEMIPQ8WUJ3 1361 aa22.79■■□□□ 1.24
SNAPC3-206ENST00000490969 CAVIN2O95810 425 aa22.79■■□□□ 1.24
SNAPC3-206ENST00000490969 HSP90AB4PQ58FF6 505 aa22.79■■□□□ 1.24
SNAPC3-206ENST00000490969 NYAP1Q6ZVC0 841 aa22.79■■□□□ 1.24
SNAPC3-206ENST00000490969 NEMFO60524 1076 aa22.78■■□□□ 1.24
SNAPC3-206ENST00000490969 CSB-PGBD3P0DP91 1061 aa22.78■■□□□ 1.24
SNAPC3-206ENST00000490969 TAF7Q15545 349 aaPredicted RBP22.78■■□□□ 1.24
SNAPC3-206ENST00000490969 PTPN14Q15678 1187 aa22.78■■□□□ 1.24
SNAPC3-206ENST00000490969 CREB3L3Q68CJ9 461 aa22.78■■□□□ 1.24
SNAPC3-206ENST00000490969 BICD2Q8TD16 824 aa22.78■■□□□ 1.24
SNAPC3-206ENST00000490969 PHAXQ9H814 394 aaKnown RBP22.78■■□□□ 1.24
SNAPC3-206ENST00000490969 FAM53CQ9NYF3 392 aa22.78■■□□□ 1.24
SNAPC3-206ENST00000490969 RBM8AQ9Y5S9 174 aaKnown RBP22.78■■□□□ 1.24
SNAPC3-206ENST00000490969 CCDC66A2RUB6 948 aa22.78■■□□□ 1.24
SNAPC3-206ENST00000490969 PLEKHO1Q53GL0 409 aaPredicted RBP22.78■■□□□ 1.24
SNAPC3-206ENST00000490969 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.78■■□□□ 1.24
SNAPC3-206ENST00000490969 V9GYY5 206 aaPredicted RBP22.78■■□□□ 1.24
SNAPC3-206ENST00000490969 LMO7Q8WWI1 1683 aa22.78■■□□□ 1.24
SNAPC3-206ENST00000490969 ARID5BQ14865 1188 aa22.77■■□□□ 1.24
SNAPC3-206ENST00000490969 LARP1Q6PKG0 1096 aaKnown RBP22.77■■□□□ 1.24
SNAPC3-206ENST00000490969 SARM1Q6SZW1 724 aa22.77■■□□□ 1.24
SNAPC3-206ENST00000490969 PGBD1Q96JS3 809 aa22.77■■□□□ 1.24
SNAPC3-206ENST00000490969 NBPF7P0C2Y1 421 aaPredicted RBP22.77■■□□□ 1.24
SNAPC3-206ENST00000490969 FBXO38Q6PIJ6 1188 aa22.76■■□□□ 1.23
SNAPC3-206ENST00000490969 ERO1AQ96HE7 468 aa22.76■■□□□ 1.23
SNAPC3-206ENST00000490969 MRFAP1L1Q96HT8 127 aa22.76■■□□□ 1.23
SNAPC3-206ENST00000490969 MEGF6O75095 1541 aa22.76■■□□□ 1.23
SNAPC3-206ENST00000490969 GOLGA6L19H0YKK7 550 aa22.76■■□□□ 1.23
SNAPC3-206ENST00000490969 PSMA5P28066 241 aa22.76■■□□□ 1.23
SNAPC3-206ENST00000490969 KCNJ4P48050 445 aa22.76■■□□□ 1.23
SNAPC3-206ENST00000490969 OS9Q13438 667 aaPredicted RBP22.76■■□□□ 1.23
SNAPC3-206ENST00000490969 COL9A3Q14050 684 aaPredicted RBP22.76■■□□□ 1.23
SNAPC3-206ENST00000490969 PRDM11Q9NQV5 511 aa22.76■■□□□ 1.23
SNAPC3-206ENST00000490969 CPDO75976 1380 aa22.76■■□□□ 1.23
SNAPC3-206ENST00000490969 SKILP12757 684 aa22.75■■□□□ 1.23
SNAPC3-206ENST00000490969 IQCB1Q15051 598 aa22.75■■□□□ 1.23
SNAPC3-206ENST00000490969 AKAP4Q5JQC9 854 aa22.75■■□□□ 1.23
SNAPC3-206ENST00000490969 ELF2Q15723 593 aa22.75■■□□□ 1.23
SNAPC3-206ENST00000490969 HDGFL1Q5TGJ6 251 aa22.75■■□□□ 1.23
SNAPC3-206ENST00000490969 ECHDC1Q9NTX5 307 aa22.75■■□□□ 1.23
SNAPC3-206ENST00000490969 SLFNL1Q499Z3 407 aa22.74■■□□□ 1.23
SNAPC3-206ENST00000490969 CLASRPQ8N2M8 674 aaKnown RBP22.74■■□□□ 1.23
SNAPC3-206ENST00000490969 ANKRD1Q15327 319 aa22.74■■□□□ 1.23
SNAPC3-206ENST00000490969 NHSL1Q5SYE7 1610 aa22.73■■□□□ 1.23
SNAPC3-206ENST00000490969 SLC27A2O14975 620 aa22.73■■□□□ 1.23
SNAPC3-206ENST00000490969 RNMTO43148 476 aaKnown RBP22.73■■□□□ 1.23
SNAPC3-206ENST00000490969 MAP4K1Q92918 833 aa22.73■■□□□ 1.23
SNAPC3-206ENST00000490969 TCEANC2Q96MN5 208 aa22.73■■□□□ 1.23
SNAPC3-206ENST00000490969 ZBTB22O15209 634 aa22.73■■□□□ 1.23
SNAPC3-206ENST00000490969 AMOTQ4VCS5 1084 aa22.73■■□□□ 1.23
SNAPC3-206ENST00000490969 EVI5LQ96CN4 794 aa22.73■■□□□ 1.23
SNAPC3-206ENST00000490969 BLOC1S2Q6QNY1 142 aa22.72■■□□□ 1.23
SNAPC3-206ENST00000490969 C11orf57Q6ZUT1 292 aaPredicted RBP22.72■■□□□ 1.23
SNAPC3-206ENST00000490969 CCZ1BP86790 482 aa22.72■■□□□ 1.23
SNAPC3-206ENST00000490969 CCZ1P86791 482 aaPredicted RBP22.72■■□□□ 1.23
SNAPC3-206ENST00000490969 LTBP4Q8N2S1 1624 aa22.72■■□□□ 1.23
SNAPC3-206ENST00000490969 CCDC69A6NI79 296 aa22.71■■□□□ 1.23
SNAPC3-206ENST00000490969 RAPGEF4Q8WZA2 1011 aa22.71■■□□□ 1.23
SNAPC3-206ENST00000490969 GPATCH3Q96I76 525 aa22.71■■□□□ 1.23
SNAPC3-206ENST00000490969 TRMT1Q9NXH9 659 aaKnown RBP22.71■■□□□ 1.23
SNAPC3-206ENST00000490969 SLU7O95391 586 aaKnown RBP22.71■■□□□ 1.23
SNAPC3-206ENST00000490969 C1orf141Q5JVX7 400 aa22.71■■□□□ 1.23
SNAPC3-206ENST00000490969 CCAR2Q8N163 923 aaKnown RBP22.71■■□□□ 1.23
SNAPC3-206ENST00000490969 FAM227BQ96M60 508 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms