RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 TGFB2P61812 414 aa20.19■□□□□ 0.82
CLIC4-203ENST00000489758 C2CD5Q86YS7 1000 aa20.19■□□□□ 0.82
CLIC4-203ENST00000489758 CHMP4BQ9H444 224 aaKnown RBP20.19■□□□□ 0.82
CLIC4-203ENST00000489758 C1orf115Q9H7X2 142 aa20.19■□□□□ 0.82
CLIC4-203ENST00000489758 HDAC5Q9UQL6 1122 aa20.19■□□□□ 0.82
CLIC4-203ENST00000489758 RTL9Q8NET4 1388 aa20.19■□□□□ 0.82
CLIC4-203ENST00000489758 DPEP1P16444 411 aa20.18■□□□□ 0.82
CLIC4-203ENST00000489758 KCNA3P22001 575 aa20.18■□□□□ 0.82
CLIC4-203ENST00000489758 HOXA10P31260 410 aaPredicted RBP20.18■□□□□ 0.82
CLIC4-203ENST00000489758 LMBR1LQ6UX01 489 aa20.18■□□□□ 0.82
CLIC4-203ENST00000489758 NLGN2Q8NFZ4 835 aa20.18■□□□□ 0.82
CLIC4-203ENST00000489758 EXOC6Q8TAG9 804 aa20.18■□□□□ 0.82
CLIC4-203ENST00000489758 PDZRN3Q9UPQ7 1066 aa20.18■□□□□ 0.82
CLIC4-203ENST00000489758 KIAA1551Q9HCM1 1747 aa20.17■□□□□ 0.82
CLIC4-203ENST00000489758 A0A0G2JLW4 131 aa20.17■□□□□ 0.82
CLIC4-203ENST00000489758 H0YIN7 160 aa20.17■□□□□ 0.82
CLIC4-203ENST00000489758 CCDC152Q4G0S7 254 aa20.17■□□□□ 0.82
CLIC4-203ENST00000489758 KLHL34Q8N239 644 aa20.17■□□□□ 0.82
CLIC4-203ENST00000489758 CCDC85AQ96PX6 553 aaPredicted RBP20.17■□□□□ 0.82
CLIC4-203ENST00000489758 GREM2Q9H772 168 aa20.17■□□□□ 0.82
CLIC4-203ENST00000489758 COL11A2P13942 1736 aaPredicted RBP20.16■□□□□ 0.82
CLIC4-203ENST00000489758 NPR1P16066 1061 aa20.16■□□□□ 0.82
CLIC4-203ENST00000489758 MTX1Q13505 466 aa20.16■□□□□ 0.82
CLIC4-203ENST00000489758 FAM161AQ3B820 660 aa20.16■□□□□ 0.82
CLIC4-203ENST00000489758 STYK1Q6J9G0 422 aa20.16■□□□□ 0.82
CLIC4-203ENST00000489758 SYT17Q9BSW7 474 aa20.16■□□□□ 0.82
CLIC4-203ENST00000489758 RPGRQ92834 1020 aaKnown RBP20.15■□□□□ 0.82
CLIC4-203ENST00000489758 MASTLQ96GX5 879 aa20.15■□□□□ 0.82
CLIC4-203ENST00000489758 SEC31BQ9NQW1 1179 aa20.15■□□□□ 0.82
CLIC4-203ENST00000489758 COL4A1P02462 1669 aa20.14■□□□□ 0.81
CLIC4-203ENST00000489758 CEP85Q6P2H3 762 aa20.14■□□□□ 0.81
CLIC4-203ENST00000489758 CRAMP1Q96RY5 1269 aa20.14■□□□□ 0.81
CLIC4-203ENST00000489758 ITGA6P23229 1130 aa20.13■□□□□ 0.81
CLIC4-203ENST00000489758 RBM17Q96I25 401 aaKnown RBP20.13■□□□□ 0.81
CLIC4-203ENST00000489758 PNMA6EA0A0J9YXQ4 647 aa20.12■□□□□ 0.81
CLIC4-203ENST00000489758 RFX5P48382 616 aaPredicted RBP20.12■□□□□ 0.81
CLIC4-203ENST00000489758 AAMPQ13685 434 aa20.12■□□□□ 0.81
CLIC4-203ENST00000489758 DDX46Q7L014 1031 aaKnown RBP20.12■□□□□ 0.81
CLIC4-203ENST00000489758 ZNF622Q969S3 477 aaKnown RBP eCLIP20.12■□□□□ 0.81
CLIC4-203ENST00000489758 CHMP3Q9Y3E7 222 aa20.12■□□□□ 0.81
CLIC4-203ENST00000489758 ATP8B2P98198 1209 aa20.11■□□□□ 0.81
CLIC4-203ENST00000489758 IFIT5Q13325 482 aaKnown RBP20.11■□□□□ 0.81
CLIC4-203ENST00000489758 GRAPQ13588 217 aa20.11■□□□□ 0.81
CLIC4-203ENST00000489758 SIRT2Q8IXJ6 389 aa20.11■□□□□ 0.81
CLIC4-203ENST00000489758 GRAPLQ8TC17 118 aaPredicted RBP20.11■□□□□ 0.81
CLIC4-203ENST00000489758 CELF1Q92879 486 aaKnown RBP20.11■□□□□ 0.81
CLIC4-203ENST00000489758 ANKRD18BA2A2Z9 1011 aa20.1■□□□□ 0.81
CLIC4-203ENST00000489758 SRGAP3O43295 1099 aa20.1■□□□□ 0.81
CLIC4-203ENST00000489758 POLA2Q14181 598 aa20.1■□□□□ 0.81
CLIC4-203ENST00000489758 CCDC57Q2TAC2 916 aa20.1■□□□□ 0.81
CLIC4-203ENST00000489758 PIM2Q9P1W9 311 aa20.1■□□□□ 0.81
CLIC4-203ENST00000489758 PCDHB15Q9Y5E8 787 aa20.1■□□□□ 0.81
CLIC4-203ENST00000489758 DLEC1Q9Y238 1755 aa20.09■□□□□ 0.81
CLIC4-203ENST00000489758 ALDH1B1P30837 517 aa20.09■□□□□ 0.81
CLIC4-203ENST00000489758 PRPF40BQ6NWY9 871 aaKnown RBP20.09■□□□□ 0.81
CLIC4-203ENST00000489758 RPAP2Q8IXW5 612 aaPredicted RBP20.09■□□□□ 0.81
CLIC4-203ENST00000489758 SSH3Q8TE77 659 aa20.09■□□□□ 0.81
CLIC4-203ENST00000489758 CNKSR1Q969H4 720 aa20.09■□□□□ 0.81
CLIC4-203ENST00000489758 RPS8P62241 208 aaKnown RBP20.08■□□□□ 0.81
CLIC4-203ENST00000489758 PTPN12Q05209 780 aaKnown RBP20.08■□□□□ 0.81
CLIC4-203ENST00000489758 SLC51AQ86UW1 340 aa20.08■□□□□ 0.81
CLIC4-203ENST00000489758 TTLL6Q8N841 843 aa20.08■□□□□ 0.81
CLIC4-203ENST00000489758 ZNF594Q96JF6 807 aaPredicted RBP20.08■□□□□ 0.81
CLIC4-203ENST00000489758 CDC5LQ99459 802 aaKnown RBP20.08■□□□□ 0.81
CLIC4-203ENST00000489758 BBOX1O75936 387 aa20.07■□□□□ 0.8
CLIC4-203ENST00000489758 ANKRD18AQ8IVF6 992 aa20.07■□□□□ 0.8
CLIC4-203ENST00000489758 KLHDC4Q8TBB5 520 aa20.07■□□□□ 0.8
CLIC4-203ENST00000489758 PPEF1O14829 653 aaPredicted RBP20.06■□□□□ 0.8
CLIC4-203ENST00000489758 C7orf43Q8WVR3 580 aa20.06■□□□□ 0.8
CLIC4-203ENST00000489758 COPRSQ9NQ92 184 aa20.06■□□□□ 0.8
CLIC4-203ENST00000489758 NEFLP07196 543 aa20.05■□□□□ 0.8
CLIC4-203ENST00000489758 DALRD3Q5D0E6 543 aaKnown RBP20.05■□□□□ 0.8
CLIC4-203ENST00000489758 BSDC1Q9NW68 430 aaPredicted RBP20.05■□□□□ 0.8
CLIC4-203ENST00000489758 WWC3Q9ULE0 1092 aa20.05■□□□□ 0.8
CLIC4-203ENST00000489758 PA2G4Q9UQ80 394 aaKnown RBP20.05■□□□□ 0.8
CLIC4-203ENST00000489758 MYH3P11055 1940 aa20.04■□□□□ 0.8
CLIC4-203ENST00000489758 IGHMBP2P38935 993 aaKnown RBP20.04■□□□□ 0.8
CLIC4-203ENST00000489758 TMC4Q7Z404 712 aa20.04■□□□□ 0.8
CLIC4-203ENST00000489758 PUS3Q9BZE2 481 aaKnown RBP20.04■□□□□ 0.8
CLIC4-203ENST00000489758 ATP6V0A2Q9Y487 856 aa20.04■□□□□ 0.8
CLIC4-203ENST00000489758 LRRC24Q50LG9 513 aa20.03■□□□□ 0.8
CLIC4-203ENST00000489758 TAF7LQ5H9L4 462 aa20.03■□□□□ 0.8
CLIC4-203ENST00000489758 SNED1Q8TER0 1413 aa20.02■□□□□ 0.8
CLIC4-203ENST00000489758 HMMRO75330 724 aa20.02■□□□□ 0.8
CLIC4-203ENST00000489758 GPR162Q16538 588 aa20.02■□□□□ 0.8
CLIC4-203ENST00000489758 OLFM4Q6UX06 510 aa20.02■□□□□ 0.8
CLIC4-203ENST00000489758 LDHAL6AQ6ZMR3 332 aa20.02■□□□□ 0.8
CLIC4-203ENST00000489758 ATG9AQ7Z3C6 839 aa20.02■□□□□ 0.8
CLIC4-203ENST00000489758 SP8Q8IXZ3 490 aa20.02■□□□□ 0.8
CLIC4-203ENST00000489758 MPHOSPH8Q99549 860 aa20.02■□□□□ 0.8
CLIC4-203ENST00000489758 BCS1LQ9Y276 419 aa20.02■□□□□ 0.8
CLIC4-203ENST00000489758 RIPOR2Q9Y4F9 1068 aa20.02■□□□□ 0.8
CLIC4-203ENST00000489758 BRCA1P38398 1863 aaKnown RBP20.01■□□□□ 0.79
CLIC4-203ENST00000489758 EYA2O00167 538 aa20.01■□□□□ 0.79
CLIC4-203ENST00000489758 C21orf2O43822 256 aa20.01■□□□□ 0.79
CLIC4-203ENST00000489758 CIAO1O76071 339 aa20.01■□□□□ 0.79
CLIC4-203ENST00000489758 SIL1Q9H173 461 aa20.01■□□□□ 0.79
CLIC4-203ENST00000489758 FBXO3Q9UK99 471 aa20.01■□□□□ 0.79
CLIC4-203ENST00000489758 MINPP1Q9UNW1 487 aa20.01■□□□□ 0.79
CLIC4-203ENST00000489758 NOP58Q9Y2X3 529 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms