RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 CCER2I3L3R5 266 aa22.39■■□□□ 1.17
ATG3-205ENST00000488910 FZD9O00144 591 aa22.39■■□□□ 1.17
ATG3-205ENST00000488910 DDNO94850 711 aaPredicted RBP22.39■■□□□ 1.17
ATG3-205ENST00000488910 G2E3Q7L622 706 aa22.39■■□□□ 1.17
ATG3-205ENST00000488910 DDX60Q8IY21 1712 aaKnown RBP22.39■■□□□ 1.17
ATG3-205ENST00000488910 ZNF521Q96K83 1311 aa22.38■■□□□ 1.17
ATG3-205ENST00000488910 SUPT20HQ8NEM7 779 aa22.38■■□□□ 1.17
ATG3-205ENST00000488910 FLIIQ13045 1269 aa22.37■■□□□ 1.17
ATG3-205ENST00000488910 RTFDC1Q9BY42 306 aaPredicted RBP22.37■■□□□ 1.17
ATG3-205ENST00000488910 PDE8AO60658 829 aa22.36■■□□□ 1.17
ATG3-205ENST00000488910 IGKV5-2P06315 115 aa22.36■■□□□ 1.17
ATG3-205ENST00000488910 MPNDQ8N594 471 aa22.36■■□□□ 1.17
ATG3-205ENST00000488910 SMC1BQ8NDV3 1235 aa22.36■■□□□ 1.17
ATG3-205ENST00000488910 L3MBTL3Q96JM7 780 aaPredicted RBP22.36■■□□□ 1.17
ATG3-205ENST00000488910 DPP8Q6V1X1 898 aaPredicted RBP22.35■■□□□ 1.17
ATG3-205ENST00000488910 LARGE2Q8N3Y3 721 aa22.35■■□□□ 1.17
ATG3-205ENST00000488910 IQCA1LA6NCM1 817 aa22.34■■□□□ 1.17
ATG3-205ENST00000488910 APLP1P51693 650 aa22.34■■□□□ 1.17
ATG3-205ENST00000488910 FKBP5Q13451 457 aaPredicted RBP22.34■■□□□ 1.17
ATG3-205ENST00000488910 SLC51AQ86UW1 340 aa22.34■■□□□ 1.17
ATG3-205ENST00000488910 CDHR2Q9BYE9 1310 aa22.33■■□□□ 1.17
ATG3-205ENST00000488910 ZNF541Q9H0D2 1346 aa22.33■■□□□ 1.17
ATG3-205ENST00000488910 TAF1P21675 1872 aa22.33■■□□□ 1.17
ATG3-205ENST00000488910 NEURL1BA8MQ27 555 aa22.33■■□□□ 1.17
ATG3-205ENST00000488910 EIF6P56537 245 aaKnown RBP22.33■■□□□ 1.17
ATG3-205ENST00000488910 RPS8P62241 208 aaKnown RBP22.33■■□□□ 1.17
ATG3-205ENST00000488910 CCDC152Q4G0S7 254 aa22.33■■□□□ 1.17
ATG3-205ENST00000488910 CELF1Q92879 486 aaKnown RBP22.33■■□□□ 1.17
ATG3-205ENST00000488910 CEP350Q5VT06 3117 aa22.33■■□□□ 1.16
ATG3-205ENST00000488910 PPIP5K2O43314 1243 aa22.32■■□□□ 1.16
ATG3-205ENST00000488910 NIM1KQ8IY84 436 aa22.32■■□□□ 1.16
ATG3-205ENST00000488910 GPC2Q8N158 579 aa22.32■■□□□ 1.16
ATG3-205ENST00000488910 DNAAF4Q8WXU2 420 aa22.32■■□□□ 1.16
ATG3-205ENST00000488910 E9PSI1 815 aa22.31■■□□□ 1.16
ATG3-205ENST00000488910 CWF19L2Q2TBE0 894 aaKnown RBP22.31■■□□□ 1.16
ATG3-205ENST00000488910 JARID2Q92833 1246 aaPredicted RBP22.31■■□□□ 1.16
ATG3-205ENST00000488910 SCN4AP35499 1836 aa22.3■■□□□ 1.16
ATG3-205ENST00000488910 H7C1W4 665 aa22.3■■□□□ 1.16
ATG3-205ENST00000488910 AOC3Q16853 763 aa22.3■■□□□ 1.16
ATG3-205ENST00000488910 LINS1Q8NG48 757 aa22.3■■□□□ 1.16
ATG3-205ENST00000488910 GCKRQ14397 625 aa22.29■■□□□ 1.16
ATG3-205ENST00000488910 KIAA2012Q0VF49 1180 aa22.28■■□□□ 1.16
ATG3-205ENST00000488910 TAF1DQ9H5J8 278 aaPredicted RBP22.28■■□□□ 1.16
ATG3-205ENST00000488910 SEC31BQ9NQW1 1179 aa22.28■■□□□ 1.16
ATG3-205ENST00000488910 HACL1Q9UJ83 578 aa22.28■■□□□ 1.16
ATG3-205ENST00000488910 ZNRF3Q9ULT6 936 aa22.28■■□□□ 1.16
ATG3-205ENST00000488910 NSFL1CQ9UNZ2 370 aaKnown RBP22.28■■□□□ 1.16
ATG3-205ENST00000488910 COL4A5P29400 1685 aa22.27■■□□□ 1.16
ATG3-205ENST00000488910 CTSWP56202 376 aa22.27■■□□□ 1.16
ATG3-205ENST00000488910 LRRC37AA6NMS7 1700 aa22.26■■□□□ 1.15
ATG3-205ENST00000488910 SLFN5Q08AF3 891 aa22.26■■□□□ 1.15
ATG3-205ENST00000488910 UBE3BQ7Z3V4 1068 aa22.26■■□□□ 1.15
ATG3-205ENST00000488910 TTLL11Q8NHH1 800 aa22.26■■□□□ 1.15
ATG3-205ENST00000488910 GJA3Q9Y6H8 435 aa22.26■■□□□ 1.15
ATG3-205ENST00000488910 CHADLQ6NUI6 762 aa22.25■■□□□ 1.15
ATG3-205ENST00000488910 ANKRD18AQ8IVF6 992 aa22.25■■□□□ 1.15
ATG3-205ENST00000488910 PLA2G12BQ9BX93 195 aa22.25■■□□□ 1.15
ATG3-205ENST00000488910 EPHX2P34913 555 aa22.24■■□□□ 1.15
ATG3-205ENST00000488910 GPSM2P81274 684 aa22.24■■□□□ 1.15
ATG3-205ENST00000488910 WASHC4Q2M389 1173 aa22.24■■□□□ 1.15
ATG3-205ENST00000488910 PNMA8AQ86V59 439 aaPredicted RBP22.24■■□□□ 1.15
ATG3-205ENST00000488910 LDHDQ86WU2 507 aa22.24■■□□□ 1.15
ATG3-205ENST00000488910 CCDC85AQ96PX6 553 aaPredicted RBP22.24■■□□□ 1.15
ATG3-205ENST00000488910 CDC5LQ99459 802 aaKnown RBP22.24■■□□□ 1.15
ATG3-205ENST00000488910 EYA3Q99504 573 aa22.24■■□□□ 1.15
ATG3-205ENST00000488910 PODXL2Q9NZ53 605 aa22.24■■□□□ 1.15
ATG3-205ENST00000488910 C6orf229H3BNL8 230 aa22.23■■□□□ 1.15
ATG3-205ENST00000488910 LMOD1P29536 600 aaPredicted RBP22.23■■□□□ 1.15
ATG3-205ENST00000488910 CXCL9Q07325 125 aa22.23■■□□□ 1.15
ATG3-205ENST00000488910 BEND3Q5T5X7 828 aa22.23■■□□□ 1.15
ATG3-205ENST00000488910 POLLQ9UGP5 575 aa22.23■■□□□ 1.15
ATG3-205ENST00000488910 RTL9Q8NET4 1388 aa22.23■■□□□ 1.15
ATG3-205ENST00000488910 MYH3P11055 1940 aa22.22■■□□□ 1.15
ATG3-205ENST00000488910 F6X3S4 739 aa22.22■■□□□ 1.15
ATG3-205ENST00000488910 CASP7P55210 303 aa22.22■■□□□ 1.15
ATG3-205ENST00000488910 TNIP1Q15025 636 aa22.22■■□□□ 1.15
ATG3-205ENST00000488910 COL4A1P02462 1669 aa22.21■■□□□ 1.15
ATG3-205ENST00000488910 POTEIP0CG38 1075 aa22.21■■□□□ 1.15
ATG3-205ENST00000488910 POTEJP0CG39 1038 aa22.21■■□□□ 1.15
ATG3-205ENST00000488910 TBC1D16Q8TBP0 767 aa22.21■■□□□ 1.15
ATG3-205ENST00000488910 ANKIB1Q9P2G1 1089 aa22.21■■□□□ 1.15
ATG3-205ENST00000488910 DUOX1Q9NRD9 1551 aa22.21■■□□□ 1.15
ATG3-205ENST00000488910 EAPPQ56P03 285 aaPredicted RBP22.2■■□□□ 1.14
ATG3-205ENST00000488910 DIEXFQ68CQ4 756 aaKnown RBP22.2■■□□□ 1.14
ATG3-205ENST00000488910 CIAPIN1Q6FI81 312 aa22.2■■□□□ 1.14
ATG3-205ENST00000488910 TRMT2AQ8IZ69 625 aaKnown RBP22.2■■□□□ 1.14
ATG3-205ENST00000488910 DNAJC5GQ8N7S2 189 aa22.2■■□□□ 1.14
ATG3-205ENST00000488910 GREM2Q9H772 168 aa22.2■■□□□ 1.14
ATG3-205ENST00000488910 BSDC1Q9NW68 430 aaPredicted RBP22.2■■□□□ 1.14
ATG3-205ENST00000488910 CSF1RP07333 972 aa22.19■■□□□ 1.14
ATG3-205ENST00000488910 SCNN1DP51172 638 aa22.19■■□□□ 1.14
ATG3-205ENST00000488910 MRPL50Q8N5N7 158 aaKnown RBP22.19■■□□□ 1.14
ATG3-205ENST00000488910 CDCA7LQ96GN5 454 aa22.19■■□□□ 1.14
ATG3-205ENST00000488910 ZC3H12CQ9C0D7 883 aaKnown RBP22.19■■□□□ 1.14
ATG3-205ENST00000488910 GGA1Q9UJY5 639 aa22.19■■□□□ 1.14
ATG3-205ENST00000488910 RIMBP2O15034 1052 aa22.18■■□□□ 1.14
ATG3-205ENST00000488910 ALDH1L1O75891 902 aa22.18■■□□□ 1.14
ATG3-205ENST00000488910 CLEC11AQ9Y240 323 aa22.18■■□□□ 1.14
ATG3-205ENST00000488910 LTBP1Q14766 1721 aa22.17■■□□□ 1.14
ATG3-205ENST00000488910 XDHP47989 1333 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms