RNA–Protein interactions for RNA: ENST00000488625.6

ZEB1-206, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,026 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-206ENST00000488625 MCMDC2Q4G0Z9 681 aa11.46□□□□□ -0.58
ZEB1-206ENST00000488625 SMARCC1Q92922 1105 aaPredicted RBP11.46□□□□□ -0.58
ZEB1-206ENST00000488625 PPP1R9BQ96SB3 815 aa11.46□□□□□ -0.58
ZEB1-206ENST00000488625 SSH2Q76I76 1423 aa11.46□□□□□ -0.58
ZEB1-206ENST00000488625 HSP90B2PQ58FF3 399 aa11.45□□□□□ -0.58
ZEB1-206ENST00000488625 XAGE3Q8WTP9 111 aa11.45□□□□□ -0.58
ZEB1-206ENST00000488625 ZPR1O75312 459 aa11.45□□□□□ -0.58
ZEB1-206ENST00000488625 PAXBP1Q9Y5B6 917 aa11.45□□□□□ -0.58
ZEB1-206ENST00000488625 INO80Q9ULG1 1556 aaPredicted RBP11.45□□□□□ -0.58
ZEB1-206ENST00000488625 GSDMDP57764 484 aa11.45□□□□□ -0.58
ZEB1-206ENST00000488625 CCDC186Q7Z3E2 898 aa11.45□□□□□ -0.58
ZEB1-206ENST00000488625 MAGEC2Q9UBF1 373 aaPredicted RBP11.45□□□□□ -0.58
ZEB1-206ENST00000488625 CCDC171Q6TFL3 1326 aa11.45□□□□□ -0.58
ZEB1-206ENST00000488625 LRRC7Q96NW7 1537 aa11.45□□□□□ -0.58
ZEB1-206ENST00000488625 HSPA4P34932 840 aa11.45□□□□□ -0.58
ZEB1-206ENST00000488625 ZMYND15Q9H091 742 aa11.45□□□□□ -0.58
ZEB1-206ENST00000488625 CWC25Q9NXE8 425 aaPredicted RBP11.45□□□□□ -0.58
ZEB1-206ENST00000488625 BIN1O00499 593 aa11.45□□□□□ -0.58
ZEB1-206ENST00000488625 BRD1O95696 1058 aa11.45□□□□□ -0.58
ZEB1-206ENST00000488625 POLR3DP05423 398 aaPredicted RBP11.45□□□□□ -0.58
ZEB1-206ENST00000488625 CASQ1P31415 396 aa11.45□□□□□ -0.58
ZEB1-206ENST00000488625 RAB11FIP4Q86YS3 637 aa11.45□□□□□ -0.58
ZEB1-206ENST00000488625 SIRT2Q8IXJ6 389 aa11.45□□□□□ -0.58
ZEB1-206ENST00000488625 RAD50Q92878 1312 aa11.45□□□□□ -0.58
ZEB1-206ENST00000488625 SGSM2O43147 1006 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 ANKRD13DQ6ZTN6 518 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 AK7Q96M32 723 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 PTGS1P23219 599 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 TXLNAP40222 546 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 NAP1L1P55209 391 aaKnown RBP11.44□□□□□ -0.58
ZEB1-206ENST00000488625 SLC39A6Q13433 755 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 IFNL2Q8IZJ0 200 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 BABAM1Q9NWV8 329 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 SLC27A2O14975 620 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 RNMTO43148 476 aaKnown RBP11.44□□□□□ -0.58
ZEB1-206ENST00000488625 SNRPA1P09661 255 aaKnown RBP11.44□□□□□ -0.58
ZEB1-206ENST00000488625 HAND2P61296 217 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 PALD1Q9ULE6 856 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 CEP131Q9UPN4 1083 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 SLC3A2P08195 630 aaKnown RBP11.44□□□□□ -0.58
ZEB1-206ENST00000488625 ZNF853P0CG23 659 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 PIP4K2AP48426 406 aaPredicted RBP11.44□□□□□ -0.58
ZEB1-206ENST00000488625 ERCC4Q92889 916 aaPredicted RBP11.44□□□□□ -0.58
ZEB1-206ENST00000488625 CWC15Q9P013 229 aaKnown RBP11.44□□□□□ -0.58
ZEB1-206ENST00000488625 IBTKQ9P2D0 1353 aaPredicted RBP11.44□□□□□ -0.58
ZEB1-206ENST00000488625 RPS6KB1P23443 525 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 HSPA2P54652 639 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 TFCP2Q12800 502 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 COPS6Q7L5N1 327 aa11.44□□□□□ -0.58
ZEB1-206ENST00000488625 RAD21O60216 631 aa11.43□□□□□ -0.58
ZEB1-206ENST00000488625 CAVIN2O95810 425 aa11.43□□□□□ -0.58
ZEB1-206ENST00000488625 MROH2AA6NES4 1674 aa11.43□□□□□ -0.58
ZEB1-206ENST00000488625 ABCA9Q8IUA7 1624 aa11.43□□□□□ -0.58
ZEB1-206ENST00000488625 ERICH4A6NGS2 130 aa11.43□□□□□ -0.58
ZEB1-206ENST00000488625 SSRP1Q08945 709 aaKnown RBP11.43□□□□□ -0.58
ZEB1-206ENST00000488625 MPHOSPH8Q99549 860 aa11.43□□□□□ -0.58
ZEB1-206ENST00000488625 UBAC1Q9BSL1 405 aa11.43□□□□□ -0.58
ZEB1-206ENST00000488625 ZBTB3Q9H5J0 574 aa11.43□□□□□ -0.58
ZEB1-206ENST00000488625 ZSCAN12O43309 604 aa11.43□□□□□ -0.58
ZEB1-206ENST00000488625 TOP1P11387 765 aaKnown RBP11.43□□□□□ -0.58
ZEB1-206ENST00000488625 LUZP1Q86V48 1076 aa11.43□□□□□ -0.58
ZEB1-206ENST00000488625 RGS12O14924 1447 aa11.43□□□□□ -0.58
ZEB1-206ENST00000488625 USP16Q9Y5T5 823 aa11.43□□□□□ -0.58
ZEB1-206ENST00000488625 SETQ01105 290 aaPredicted RBP11.43□□□□□ -0.58
ZEB1-206ENST00000488625 SNW1Q13573 536 aaKnown RBP11.43□□□□□ -0.58
ZEB1-206ENST00000488625 ISM2Q6H9L7 571 aa11.43□□□□□ -0.58
ZEB1-206ENST00000488625 CCDC144CPQ8IYA2 1237 aa11.43□□□□□ -0.58
ZEB1-206ENST00000488625 RUFY1Q96T51 708 aa11.43□□□□□ -0.58
ZEB1-206ENST00000488625 IFIT5Q13325 482 aaKnown RBP11.42□□□□□ -0.58
ZEB1-206ENST00000488625 TMX1Q9H3N1 280 aa11.42□□□□□ -0.58
ZEB1-206ENST00000488625 GOLGA8AA7E2F4 631 aa11.42□□□□□ -0.58
ZEB1-206ENST00000488625 CCDC150Q8NCX0 1101 aa11.42□□□□□ -0.58
ZEB1-206ENST00000488625 CCDC94Q9BW85 323 aaPredicted RBP11.42□□□□□ -0.58
ZEB1-206ENST00000488625 UBXN4Q92575 508 aa11.42□□□□□ -0.58
ZEB1-206ENST00000488625 SNRKQ9NRH2 765 aa11.42□□□□□ -0.58
ZEB1-206ENST00000488625 ALKQ9UM73 1620 aa11.42□□□□□ -0.58
ZEB1-206ENST00000488625 NOM1Q5C9Z4 860 aaKnown RBP11.42□□□□□ -0.58
ZEB1-206ENST00000488625 LINS1Q8NG48 757 aa11.42□□□□□ -0.58
ZEB1-206ENST00000488625 NCOA7Q8NI08 942 aa11.42□□□□□ -0.58
ZEB1-206ENST00000488625 IP6K1Q92551 441 aa11.42□□□□□ -0.58
ZEB1-206ENST00000488625 CHAMP1Q96JM3 812 aa11.42□□□□□ -0.58
ZEB1-206ENST00000488625 SLC12A7Q9Y666 1083 aa11.42□□□□□ -0.58
ZEB1-206ENST00000488625 LMTK2Q8IWU2 1503 aa11.42□□□□□ -0.58
ZEB1-206ENST00000488625 APOBRQ0VD83 1088 aa11.41□□□□□ -0.58
ZEB1-206ENST00000488625 AOPEPQ8N6M6 819 aa11.41□□□□□ -0.58
ZEB1-206ENST00000488625 CNNM3Q8NE01 707 aa11.41□□□□□ -0.58
ZEB1-206ENST00000488625 PAG1Q9NWQ8 432 aa11.41□□□□□ -0.58
ZEB1-206ENST00000488625 METP08581 1390 aa11.41□□□□□ -0.58
ZEB1-206ENST00000488625 NLRP1Q9C000 1473 aa11.41□□□□□ -0.58
ZEB1-206ENST00000488625 NBPF7P0C2Y1 421 aaPredicted RBP11.41□□□□□ -0.58
ZEB1-206ENST00000488625 FAM227BQ96M60 508 aa11.41□□□□□ -0.58
ZEB1-206ENST00000488625 ORC3Q9UBD5 711 aaPredicted RBP11.41□□□□□ -0.58
ZEB1-206ENST00000488625 TMCO3Q6UWJ1 677 aa11.41□□□□□ -0.58
ZEB1-206ENST00000488625 LGR6Q9HBX8 967 aa11.41□□□□□ -0.58
ZEB1-206ENST00000488625 WDHD1O75717 1129 aaPredicted RBP11.41□□□□□ -0.58
ZEB1-206ENST00000488625 C17orf53Q8N3J3 647 aaPredicted RBP11.4□□□□□ -0.58
ZEB1-206ENST00000488625 LRP2BPQ9P2M1 347 aa11.4□□□□□ -0.58
ZEB1-206ENST00000488625 KLF18A0A0U1RQI7 1052 aa11.4□□□□□ -0.58
ZEB1-206ENST00000488625 DTNBO60941 627 aa11.4□□□□□ -0.58
ZEB1-206ENST00000488625 URI1O94763 535 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms