RNA–Protein interactions for RNA: ENST00000488196.5

STRADB-209, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-209ENST00000488196 GLTPD2A6NH11 291 aa29.79■■■□□ 2.36
STRADB-209ENST00000488196 PDE8AO60658 829 aa29.78■■■□□ 2.36
STRADB-209ENST00000488196 TRMT2AQ8IZ69 625 aaKnown RBP29.78■■■□□ 2.36
STRADB-209ENST00000488196 CELF1Q92879 486 aaKnown RBP29.78■■■□□ 2.36
STRADB-209ENST00000488196 RRAGCQ9HB90 399 aa29.78■■■□□ 2.36
STRADB-209ENST00000488196 COL4A1P02462 1669 aa29.78■■■□□ 2.36
STRADB-209ENST00000488196 HSP90B1P14625 803 aaKnown RBP29.77■■■□□ 2.36
STRADB-209ENST00000488196 IARSP41252 1262 aaKnown RBP29.77■■■□□ 2.36
STRADB-209ENST00000488196 SP8Q8IXZ3 490 aa29.77■■■□□ 2.36
STRADB-209ENST00000488196 TMX4Q9H1E5 349 aaPredicted RBP29.77■■■□□ 2.36
STRADB-209ENST00000488196 CDHR2Q9BYE9 1310 aa29.76■■■□□ 2.36
STRADB-209ENST00000488196 GCKRQ14397 625 aa29.76■■■□□ 2.35
STRADB-209ENST00000488196 GRIPAP1Q4V328 841 aa29.76■■■□□ 2.35
STRADB-209ENST00000488196 CCDC85AQ96PX6 553 aaPredicted RBP29.76■■■□□ 2.35
STRADB-209ENST00000488196 LINS1Q8NG48 757 aa29.75■■■□□ 2.35
STRADB-209ENST00000488196 SEC31BQ9NQW1 1179 aa29.75■■■□□ 2.35
STRADB-209ENST00000488196 H7C1W4 665 aa29.74■■■□□ 2.35
STRADB-209ENST00000488196 DPY19L2Q6NUT2 758 aa29.74■■■□□ 2.35
STRADB-209ENST00000488196 UBE3BQ7Z3V4 1068 aa29.74■■■□□ 2.35
STRADB-209ENST00000488196 MRPL50Q8N5N7 158 aaKnown RBP29.74■■■□□ 2.35
STRADB-209ENST00000488196 CCDC152Q4G0S7 254 aa29.72■■■□□ 2.35
STRADB-209ENST00000488196 BEND3Q5T5X7 828 aa29.72■■■□□ 2.35
STRADB-209ENST00000488196 SSH1Q8WYL5 1049 aa29.72■■■□□ 2.35
STRADB-209ENST00000488196 MYH3P11055 1940 aa29.71■■■□□ 2.35
STRADB-209ENST00000488196 DDNO94850 711 aaPredicted RBP29.71■■■□□ 2.35
STRADB-209ENST00000488196 RPS8P62241 208 aaKnown RBP29.71■■■□□ 2.35
STRADB-209ENST00000488196 DPP8Q6V1X1 898 aaPredicted RBP29.71■■■□□ 2.35
STRADB-209ENST00000488196 TMC4Q7Z404 712 aa29.71■■■□□ 2.35
STRADB-209ENST00000488196 MPNDQ8N594 471 aa29.71■■■□□ 2.35
STRADB-209ENST00000488196 BCL2L13Q9BXK5 485 aa29.71■■■□□ 2.35
STRADB-209ENST00000488196 COL4A5P29400 1685 aa29.71■■■□□ 2.35
STRADB-209ENST00000488196 CTSWP56202 376 aa29.7■■■□□ 2.35
STRADB-209ENST00000488196 CASP7P55210 303 aa29.69■■■□□ 2.34
STRADB-209ENST00000488196 LARGE2Q8N3Y3 721 aa29.69■■■□□ 2.34
STRADB-209ENST00000488196 ZNF541Q9H0D2 1346 aa29.69■■■□□ 2.34
STRADB-209ENST00000488196 LRRC37AA6NMS7 1700 aa29.68■■■□□ 2.34
STRADB-209ENST00000488196 SLC4A10Q6U841 1118 aa29.68■■■□□ 2.34
STRADB-209ENST00000488196 TTLL11Q8NHH1 800 aa29.68■■■□□ 2.34
STRADB-209ENST00000488196 JDP2Q8WYK2 163 aa29.68■■■□□ 2.34
STRADB-209ENST00000488196 RTFDC1Q9BY42 306 aaPredicted RBP29.68■■■□□ 2.34
STRADB-209ENST00000488196 POTECB2RU33 542 aa29.67■■■□□ 2.34
STRADB-209ENST00000488196 PPIP5K2O43314 1243 aa29.67■■■□□ 2.34
STRADB-209ENST00000488196 HNRNPUQ00839 825 aaKnown RBP eCLIP29.67■■■□□ 2.34
STRADB-209ENST00000488196 AOC3Q16853 763 aa29.67■■■□□ 2.34
STRADB-209ENST00000488196 WDR90Q96KV7 1748 aa29.66■■■□□ 2.34
STRADB-209ENST00000488196 FZD9O00144 591 aa29.66■■■□□ 2.34
STRADB-209ENST00000488196 TOMM70O94826 608 aa29.66■■■□□ 2.34
STRADB-209ENST00000488196 VEGFAP15692 232 aaPredicted RBP29.66■■■□□ 2.34
STRADB-209ENST00000488196 C16orf71Q8IYS4 520 aaPredicted RBP29.66■■■□□ 2.34
STRADB-209ENST00000488196 SUPT20HQ8NEM7 779 aa29.66■■■□□ 2.34
STRADB-209ENST00000488196 GREM2Q9H772 168 aa29.65■■■□□ 2.34
STRADB-209ENST00000488196 NSFL1CQ9UNZ2 370 aaKnown RBP29.65■■■□□ 2.34
STRADB-209ENST00000488196 GPSM2P81274 684 aa29.64■■■□□ 2.34
STRADB-209ENST00000488196 ALDH1L2Q3SY69 923 aa29.64■■■□□ 2.34
STRADB-209ENST00000488196 PLA2G12BQ9BX93 195 aa29.64■■■□□ 2.34
STRADB-209ENST00000488196 SMC4Q9NTJ3 1288 aa29.63■■■□□ 2.33
STRADB-209ENST00000488196 DUOX1Q9NRD9 1551 aa29.63■■■□□ 2.33
STRADB-209ENST00000488196 ANKRD18AQ8IVF6 992 aa29.62■■■□□ 2.33
STRADB-209ENST00000488196 NIM1KQ8IY84 436 aa29.62■■■□□ 2.33
STRADB-209ENST00000488196 SRCIN1Q9C0H9 1055 aa29.62■■■□□ 2.33
STRADB-209ENST00000488196 CT47B1P0C2W7 299 aaPredicted RBP29.61■■■□□ 2.33
STRADB-209ENST00000488196 VPS33BQ9H267 617 aa29.61■■■□□ 2.33
STRADB-209ENST00000488196 PTPRCP08575 1304 aa29.61■■■□□ 2.33
STRADB-209ENST00000488196 ALDH1L1O75891 902 aa29.6■■■□□ 2.33
STRADB-209ENST00000488196 EIF6P56537 245 aaKnown RBP29.6■■■□□ 2.33
STRADB-209ENST00000488196 RBM46Q8TBY0 533 aaKnown RBP29.6■■■□□ 2.33
STRADB-209ENST00000488196 CDC5LQ99459 802 aaKnown RBP29.6■■■□□ 2.33
STRADB-209ENST00000488196 POLLQ9UGP5 575 aa29.6■■■□□ 2.33
STRADB-209ENST00000488196 SPEF2Q9C093 1822 aa29.59■■■□□ 2.33
STRADB-209ENST00000488196 GRM8O00222 908 aa29.59■■■□□ 2.33
STRADB-209ENST00000488196 KIAA2012Q0VF49 1180 aa29.59■■■□□ 2.33
STRADB-209ENST00000488196 RTL9Q8NET4 1388 aa29.59■■■□□ 2.33
STRADB-209ENST00000488196 C6orf229H3BNL8 230 aa29.58■■■□□ 2.33
STRADB-209ENST00000488196 CSF1RP07333 972 aa29.58■■■□□ 2.33
STRADB-209ENST00000488196 LTBP1Q14766 1721 aa29.58■■■□□ 2.33
STRADB-209ENST00000488196 FAM161AQ3B820 660 aa29.58■■■□□ 2.33
STRADB-209ENST00000488196 L3MBTL3Q96JM7 780 aaPredicted RBP29.58■■■□□ 2.33
STRADB-209ENST00000488196 C9orf78Q9NZ63 289 aaPredicted RBP29.58■■■□□ 2.33
STRADB-209ENST00000488196 FOXO4P98177 505 aa29.57■■■□□ 2.32
STRADB-209ENST00000488196 GPR101Q96P66 508 aaPredicted RBP29.57■■■□□ 2.32
STRADB-209ENST00000488196 GJA3Q9Y6H8 435 aa29.57■■■□□ 2.32
STRADB-209ENST00000488196 ITGA6P23229 1130 aa29.56■■■□□ 2.32
STRADB-209ENST00000488196 GPC2Q8N158 579 aa29.56■■■□□ 2.32
STRADB-209ENST00000488196 TBC1D16Q8TBP0 767 aa29.56■■■□□ 2.32
STRADB-209ENST00000488196 ANKIB1Q9P2G1 1089 aa29.56■■■□□ 2.32
STRADB-209ENST00000488196 RIMBP2O15034 1052 aa29.55■■■□□ 2.32
STRADB-209ENST00000488196 WASHC4Q2M389 1173 aa29.55■■■□□ 2.32
STRADB-209ENST00000488196 EPHA10Q5JZY3 1008 aa29.55■■■□□ 2.32
STRADB-209ENST00000488196 ZNRF3Q9ULT6 936 aa29.55■■■□□ 2.32
STRADB-209ENST00000488196 RARSP54136 660 aaKnown RBP29.54■■■□□ 2.32
STRADB-209ENST00000488196 BSDC1Q9NW68 430 aaPredicted RBP29.54■■■□□ 2.32
STRADB-209ENST00000488196 PODXL2Q9NZ53 605 aa29.54■■■□□ 2.32
STRADB-209ENST00000488196 SCN4AP35499 1836 aa29.54■■■□□ 2.32
STRADB-209ENST00000488196 NOB1Q9ULX3 412 aaKnown RBP29.53■■■□□ 2.32
STRADB-209ENST00000488196 IQCA1LA6NCM1 817 aa29.52■■■□□ 2.32
STRADB-209ENST00000488196 UFL1O94874 794 aa29.52■■■□□ 2.32
STRADB-209ENST00000488196 NBPF7P0C2Y1 421 aaPredicted RBP29.52■■■□□ 2.32
STRADB-209ENST00000488196 CXCL9Q07325 125 aa29.52■■■□□ 2.32
STRADB-209ENST00000488196 GGA1Q9UJY5 639 aa29.52■■■□□ 2.32
STRADB-209ENST00000488196 MINPP1Q9UNW1 487 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms