RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 C7orf43Q8WVR3 580 aa15.51■□□□□ 0.07
SFXN3-206ENST00000487721 NUP98P52948 1817 aa15.5■□□□□ 0.07
SFXN3-206ENST00000487721 NEURL1BA8MQ27 555 aa15.5■□□□□ 0.07
SFXN3-206ENST00000487721 IGKV5-2P06315 115 aa15.5■□□□□ 0.07
SFXN3-206ENST00000487721 SF3B3Q15393 1217 aaKnown RBP15.5■□□□□ 0.07
SFXN3-206ENST00000487721 TMC4Q7Z404 712 aa15.5■□□□□ 0.07
SFXN3-206ENST00000487721 ANKRD31Q8N7Z5 1873 aa15.49■□□□□ 0.07
SFXN3-206ENST00000487721 PDE8AO60658 829 aa15.49■□□□□ 0.07
SFXN3-206ENST00000487721 GRAPQ13588 217 aa15.49■□□□□ 0.07
SFXN3-206ENST00000487721 CWF19L2Q2TBE0 894 aaKnown RBP15.49■□□□□ 0.07
SFXN3-206ENST00000487721 CCDC152Q4G0S7 254 aa15.49■□□□□ 0.07
SFXN3-206ENST00000487721 CHADLQ6NUI6 762 aa15.49■□□□□ 0.07
SFXN3-206ENST00000487721 GRAPLQ8TC17 118 aaPredicted RBP15.49■□□□□ 0.07
SFXN3-206ENST00000487721 ABCC4O15439 1325 aa15.48■□□□□ 0.07
SFXN3-206ENST00000487721 PTPRCP08575 1304 aa15.48■□□□□ 0.07
SFXN3-206ENST00000487721 FKBP4Q02790 459 aaKnown RBP eCLIP15.48■□□□□ 0.07
SFXN3-206ENST00000487721 GCKRQ14397 625 aa15.48■□□□□ 0.07
SFXN3-206ENST00000487721 MRPL50Q8N5N7 158 aaKnown RBP15.48■□□□□ 0.07
SFXN3-206ENST00000487721 SSH1Q8WYL5 1049 aa15.48■□□□□ 0.07
SFXN3-206ENST00000487721 SMC4Q9NTJ3 1288 aa15.48■□□□□ 0.07
SFXN3-206ENST00000487721 ATP6V0A2Q9Y487 856 aa15.48■□□□□ 0.07
SFXN3-206ENST00000487721 ZBED9Q6R2W3 1325 aa15.47■□□□□ 0.07
SFXN3-206ENST00000487721 CDHR2Q9BYE9 1310 aa15.47■□□□□ 0.07
SFXN3-206ENST00000487721 F6X3S4 739 aa15.47■□□□□ 0.07
SFXN3-206ENST00000487721 POTEIP0CG38 1075 aa15.47■□□□□ 0.07
SFXN3-206ENST00000487721 POTEJP0CG39 1038 aa15.47■□□□□ 0.07
SFXN3-206ENST00000487721 CCDC88AQ3V6T2 1871 aa15.47■□□□□ 0.07
SFXN3-206ENST00000487721 SLC4A10Q6U841 1118 aa15.47■□□□□ 0.07
SFXN3-206ENST00000487721 SLX4Q8IY92 1834 aa15.46■□□□□ 0.07
SFXN3-206ENST00000487721 IQCA1LA6NCM1 817 aa15.46■□□□□ 0.07
SFXN3-206ENST00000487721 HSPA1AP0DMV8 641 aaKnown RBP15.46■□□□□ 0.07
SFXN3-206ENST00000487721 HSPA1BP0DMV9 641 aaKnown RBP15.46■□□□□ 0.07
SFXN3-206ENST00000487721 UBE3BQ7Z3V4 1068 aa15.46■□□□□ 0.07
SFXN3-206ENST00000487721 SP8Q8IXZ3 490 aa15.46■□□□□ 0.07
SFXN3-206ENST00000487721 TNS4Q8IZW8 715 aa15.46■□□□□ 0.07
SFXN3-206ENST00000487721 JARID2Q92833 1246 aaPredicted RBP15.46■□□□□ 0.07
SFXN3-206ENST00000487721 YTHDC1Q96MU7 727 aaKnown RBP15.46■□□□□ 0.07
SFXN3-206ENST00000487721 PSMD1Q99460 953 aa15.46■□□□□ 0.07
SFXN3-206ENST00000487721 SRCIN1Q9C0H9 1055 aa15.46■□□□□ 0.07
SFXN3-206ENST00000487721 ZNF277Q9NRM2 450 aaPredicted RBP15.46■□□□□ 0.07
SFXN3-206ENST00000487721 CREBZFQ9NS37 354 aa15.46■□□□□ 0.07
SFXN3-206ENST00000487721 H7C1W4 665 aa15.45■□□□□ 0.06
SFXN3-206ENST00000487721 ALDH1L1O75891 902 aa15.45■□□□□ 0.06
SFXN3-206ENST00000487721 BEND3Q5T5X7 828 aa15.45■□□□□ 0.06
SFXN3-206ENST00000487721 OLFM4Q6UX06 510 aa15.45■□□□□ 0.06
SFXN3-206ENST00000487721 SUPT20HQ8NEM7 779 aa15.45■□□□□ 0.06
SFXN3-206ENST00000487721 L3MBTL3Q96JM7 780 aaPredicted RBP15.45■□□□□ 0.06
SFXN3-206ENST00000487721 C9orf78Q9NZ63 289 aaPredicted RBP15.45■□□□□ 0.06
SFXN3-206ENST00000487721 FER1L6Q2WGJ9 1857 aa15.45■□□□□ 0.06
SFXN3-206ENST00000487721 COL11A2P13942 1736 aaPredicted RBP15.44■□□□□ 0.06
SFXN3-206ENST00000487721 CTSWP56202 376 aa15.44■□□□□ 0.06
SFXN3-206ENST00000487721 RPS8P62241 208 aaKnown RBP15.44■□□□□ 0.06
SFXN3-206ENST00000487721 DPP8Q6V1X1 898 aaPredicted RBP15.44■□□□□ 0.06
SFXN3-206ENST00000487721 JDP2Q8WYK2 163 aa15.44■□□□□ 0.06
SFXN3-206ENST00000487721 CDC5LQ99459 802 aaKnown RBP15.44■□□□□ 0.06
SFXN3-206ENST00000487721 BCL2L13Q9BXK5 485 aa15.44■□□□□ 0.06
SFXN3-206ENST00000487721 TAF1DQ9H5J8 278 aaPredicted RBP15.44■□□□□ 0.06
SFXN3-206ENST00000487721 TIAM2Q8IVF5 1701 aa15.43■□□□□ 0.06
SFXN3-206ENST00000487721 LDHDQ86WU2 507 aa15.43■□□□□ 0.06
SFXN3-206ENST00000487721 MPNDQ8N594 471 aa15.43■□□□□ 0.06
SFXN3-206ENST00000487721 VPS33BQ9H267 617 aa15.43■□□□□ 0.06
SFXN3-206ENST00000487721 MKRN1Q9UHC7 482 aaKnown RBP15.43■□□□□ 0.06
SFXN3-206ENST00000487721 ANKRD36CQ5JPF3 1778 aa15.43■□□□□ 0.06
SFXN3-206ENST00000487721 ARFGEF2Q9Y6D5 1785 aa15.42■□□□□ 0.06
SFXN3-206ENST00000487721 CAPN15O75808 1086 aa15.42■□□□□ 0.06
SFXN3-206ENST00000487721 IARSP41252 1262 aaKnown RBP15.42■□□□□ 0.06
SFXN3-206ENST00000487721 ANKRD18AQ8IVF6 992 aa15.42■□□□□ 0.06
SFXN3-206ENST00000487721 CELF1Q92879 486 aaKnown RBP15.42■□□□□ 0.06
SFXN3-206ENST00000487721 CCDC85AQ96PX6 553 aaPredicted RBP15.42■□□□□ 0.06
SFXN3-206ENST00000487721 PLA2G12BQ9BX93 195 aa15.42■□□□□ 0.06
SFXN3-206ENST00000487721 API5Q9BZZ5 524 aaKnown RBP15.42■□□□□ 0.06
SFXN3-206ENST00000487721 GRM8O00222 908 aa15.41■□□□□ 0.06
SFXN3-206ENST00000487721 IPO8O15397 1037 aaKnown RBP15.41■□□□□ 0.06
SFXN3-206ENST00000487721 RARSP54136 660 aaKnown RBP15.41■□□□□ 0.06
SFXN3-206ENST00000487721 BRPF1P55201 1214 aaPredicted RBP15.41■□□□□ 0.06
SFXN3-206ENST00000487721 EAPPQ56P03 285 aaPredicted RBP15.41■□□□□ 0.06
SFXN3-206ENST00000487721 LARGE2Q8N3Y3 721 aa15.41■□□□□ 0.06
SFXN3-206ENST00000487721 TTLL11Q8NHH1 800 aa15.41■□□□□ 0.06
SFXN3-206ENST00000487721 HACL1Q9UJ83 578 aa15.41■□□□□ 0.06
SFXN3-206ENST00000487721 DICER1Q9UPY3 1922 aaKnown RBP15.41■□□□□ 0.06
SFXN3-206ENST00000487721 KIF16BQ96L93 1317 aa15.41■□□□□ 0.06
SFXN3-206ENST00000487721 ZNF541Q9H0D2 1346 aa15.41■□□□□ 0.06
SFXN3-206ENST00000487721 FZD9O00144 591 aa15.4■□□□□ 0.06
SFXN3-206ENST00000487721 ITGBL1O95965 494 aaPredicted RBP15.4■□□□□ 0.06
SFXN3-206ENST00000487721 SEC31BQ9NQW1 1179 aa15.4■□□□□ 0.06
SFXN3-206ENST00000487721 NOB1Q9ULX3 412 aaKnown RBP15.4■□□□□ 0.06
SFXN3-206ENST00000487721 NSFL1CQ9UNZ2 370 aaKnown RBP15.4■□□□□ 0.06
SFXN3-206ENST00000487721 CLEC11AQ9Y240 323 aa15.4■□□□□ 0.06
SFXN3-206ENST00000487721 PASKQ96RG2 1323 aa15.4■□□□□ 0.06
SFXN3-206ENST00000487721 PCNTO95613 3336 aa15.4■□□□□ 0.06
SFXN3-206ENST00000487721 PPIP5K2O43314 1243 aa15.39■□□□□ 0.05
SFXN3-206ENST00000487721 EPHX2P34913 555 aa15.39■□□□□ 0.05
SFXN3-206ENST00000487721 IGHMBP2P38935 993 aaKnown RBP15.39■□□□□ 0.05
SFXN3-206ENST00000487721 CCT4P50991 539 aaKnown RBP15.39■□□□□ 0.05
SFXN3-206ENST00000487721 RTFDC1Q9BY42 306 aaPredicted RBP15.39■□□□□ 0.05
SFXN3-206ENST00000487721 ANKIB1Q9P2G1 1089 aa15.39■□□□□ 0.05
SFXN3-206ENST00000487721 TMEM88BA6NKF7 163 aa15.38■□□□□ 0.05
SFXN3-206ENST00000487721 CASP7P55210 303 aa15.38■□□□□ 0.05
SFXN3-206ENST00000487721 EIF6P56537 245 aaKnown RBP15.38■□□□□ 0.05
SFXN3-206ENST00000487721 PNMA8AQ86V59 439 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms