RNA–Protein interactions for RNA: ENST00000487086.1

NSFL1C-208, Transcript of NSFL1 cofactor, humanhuman

TSL 2

Gene NSFL1C, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-208ENST00000487086 MAP1SQ66K74 1059 aaPredicted RBP21.38■■□□□ 1.01
NSFL1C-208ENST00000487086 PPP1R42Q7Z4L9 355 aa21.38■■□□□ 1.01
NSFL1C-208ENST00000487086 SLC51AQ86UW1 340 aa21.38■■□□□ 1.01
NSFL1C-208ENST00000487086 SNED1Q8TER0 1413 aa21.38■■□□□ 1.01
NSFL1C-208ENST00000487086 ZBED9Q6R2W3 1325 aa21.37■■□□□ 1.01
NSFL1C-208ENST00000487086 FZD9O00144 591 aa21.37■■□□□ 1.01
NSFL1C-208ENST00000487086 GTF2E1P29083 439 aaPredicted RBP21.37■■□□□ 1.01
NSFL1C-208ENST00000487086 TRIM28Q13263 835 aaKnown RBP21.37■■□□□ 1.01
NSFL1C-208ENST00000487086 KSR2Q6VAB6 950 aa21.37■■□□□ 1.01
NSFL1C-208ENST00000487086 UTP14AQ9BVJ6 771 aaKnown RBP21.37■■□□□ 1.01
NSFL1C-208ENST00000487086 MAP3K2Q9Y2U5 619 aa21.37■■□□□ 1.01
NSFL1C-208ENST00000487086 LTBP1Q14766 1721 aa21.37■■□□□ 1.01
NSFL1C-208ENST00000487086 PI4KAP2A4QPH2 592 aa21.36■■□□□ 1.01
NSFL1C-208ENST00000487086 ATP5J2-PTCD1G3V325 749 aa21.36■■□□□ 1.01
NSFL1C-208ENST00000487086 ALDH1B1P30837 517 aa21.36■■□□□ 1.01
NSFL1C-208ENST00000487086 PI4KAP1Q8N8J0 262 aa21.36■■□□□ 1.01
NSFL1C-208ENST00000487086 METTL22Q9BUU2 404 aaPredicted RBP21.36■■□□□ 1.01
NSFL1C-208ENST00000487086 CNTROBQ8N137 903 aa21.35■■□□□ 1.01
NSFL1C-208ENST00000487086 MYD88Q99836 296 aa21.35■■□□□ 1.01
NSFL1C-208ENST00000487086 CRY2Q49AN0 593 aa21.34■■□□□ 1.01
NSFL1C-208ENST00000487086 ZNF428Q96B54 188 aa21.34■■□□□ 1.01
NSFL1C-208ENST00000487086 FKBP5Q13451 457 aaPredicted RBP21.33■■□□□ 1.01
NSFL1C-208ENST00000487086 TRMT112Q9UI30 125 aaKnown RBP21.33■■□□□ 1.01
NSFL1C-208ENST00000487086 SH3TC1Q8TE82 1336 aa21.32■■□□□ 1
NSFL1C-208ENST00000487086 IGKV5-2P06315 115 aa21.32■■□□□ 1
NSFL1C-208ENST00000487086 CT47B1P0C2W7 299 aaPredicted RBP21.32■■□□□ 1
NSFL1C-208ENST00000487086 FMR1Q06787 632 aaKnown RBP eCLIP21.32■■□□□ 1
NSFL1C-208ENST00000487086 SLC10A5Q5PT55 438 aa21.32■■□□□ 1
NSFL1C-208ENST00000487086 C3orf67Q6ZVT6 689 aa21.32■■□□□ 1
NSFL1C-208ENST00000487086 PNMA8AQ86V59 439 aaPredicted RBP21.32■■□□□ 1
NSFL1C-208ENST00000487086 GPC2Q8N158 579 aa21.32■■□□□ 1
NSFL1C-208ENST00000487086 SSH1Q8WYL5 1049 aa21.32■■□□□ 1
NSFL1C-208ENST00000487086 PRDM10Q9NQV6 1147 aa21.32■■□□□ 1
NSFL1C-208ENST00000487086 GJA3Q9Y6H8 435 aa21.32■■□□□ 1
NSFL1C-208ENST00000487086 CTCFP49711 727 aaPredicted RBP21.31■■□□□ 1
NSFL1C-208ENST00000487086 LBX1P52954 281 aa21.31■■□□□ 1
NSFL1C-208ENST00000487086 MRPL50Q8N5N7 158 aaKnown RBP21.31■■□□□ 1
NSFL1C-208ENST00000487086 CCDC191Q8NCU4 936 aa21.31■■□□□ 1
NSFL1C-208ENST00000487086 AIDAQ96BJ3 306 aa21.31■■□□□ 1
NSFL1C-208ENST00000487086 PSMD1Q99460 953 aa21.31■■□□□ 1
NSFL1C-208ENST00000487086 WBP1LQ9NX94 342 aa21.31■■□□□ 1
NSFL1C-208ENST00000487086 DEFB115Q30KQ5 88 aa21.3■■□□□ 1
NSFL1C-208ENST00000487086 DNAAF4Q8WXU2 420 aa21.3■■□□□ 1
NSFL1C-208ENST00000487086 JDP2Q8WYK2 163 aa21.3■■□□□ 1
NSFL1C-208ENST00000487086 RASSF10A6NK89 507 aa21.29■■□□□ 1
NSFL1C-208ENST00000487086 ALDH1L2Q3SY69 923 aa21.29■■□□□ 1
NSFL1C-208ENST00000487086 FAM89AQ96GI7 184 aa21.29■■□□□ 1
NSFL1C-208ENST00000487086 MYH3P11055 1940 aa21.28■■□□□ 1
NSFL1C-208ENST00000487086 NEURL1BA8MQ27 555 aa21.28■■□□□ 1
NSFL1C-208ENST00000487086 HCLS1P14317 486 aaPredicted RBP21.28■■□□□ 1
NSFL1C-208ENST00000487086 EPS15P42566 896 aa21.28■■□□□ 1
NSFL1C-208ENST00000487086 NEXNQ0ZGT2 675 aa21.28■■□□□ 1
NSFL1C-208ENST00000487086 ZBTB38Q8NAP3 1195 aaPredicted RBP21.28■■□□□ 1
NSFL1C-208ENST00000487086 RPGRQ92834 1020 aaKnown RBP21.28■■□□□ 1
NSFL1C-208ENST00000487086 BCL2L13Q9BXK5 485 aa21.28■■□□□ 1
NSFL1C-208ENST00000487086 CWC25Q9NXE8 425 aaPredicted RBP21.28■■□□□ 1
NSFL1C-208ENST00000487086 TRPM7Q96QT4 1865 aa21.28■■□□□ 1
NSFL1C-208ENST00000487086 F6X3S4 739 aa21.27■■□□□ 1
NSFL1C-208ENST00000487086 HOXA10P31260 410 aaPredicted RBP21.27■■□□□ 1
NSFL1C-208ENST00000487086 SCNN1DP51172 638 aa21.27■■□□□ 1
NSFL1C-208ENST00000487086 EIF6P56537 245 aaKnown RBP21.27■■□□□ 1
NSFL1C-208ENST00000487086 CWF19L2Q2TBE0 894 aaKnown RBP21.27■■□□□ 1
NSFL1C-208ENST00000487086 ABT1Q9ULW3 272 aaKnown RBP21.27■■□□□ 1
NSFL1C-208ENST00000487086 WDR33Q9C0J8 1336 aaKnown RBP21.27■□□□□ 0.99
NSFL1C-208ENST00000487086 PCCAP05165 728 aaPredicted RBP21.26■□□□□ 0.99
NSFL1C-208ENST00000487086 HSPA8P11142 646 aaKnown RBP21.26■□□□□ 0.99
NSFL1C-208ENST00000487086 LARGE2Q8N3Y3 721 aa21.26■□□□□ 0.99
NSFL1C-208ENST00000487086 NLRP3Q96P20 1036 aa21.26■□□□□ 0.99
NSFL1C-208ENST00000487086 TAF1P21675 1872 aa21.26■□□□□ 0.99
NSFL1C-208ENST00000487086 RTL5Q5HYW3 569 aaPredicted RBP21.25■□□□□ 0.99
NSFL1C-208ENST00000487086 CC2D2BQ6DHV5 1058 aa21.25■□□□□ 0.99
NSFL1C-208ENST00000487086 LINS1Q8NG48 757 aa21.25■□□□□ 0.99
NSFL1C-208ENST00000487086 SMC4Q9NTJ3 1288 aa21.25■□□□□ 0.99
NSFL1C-208ENST00000487086 PTPRCP08575 1304 aa21.25■□□□□ 0.99
NSFL1C-208ENST00000487086 COL4A1P02462 1669 aa21.24■□□□□ 0.99
NSFL1C-208ENST00000487086 PPEF1O14829 653 aaPredicted RBP21.24■□□□□ 0.99
NSFL1C-208ENST00000487086 BEND3Q5T5X7 828 aa21.24■□□□□ 0.99
NSFL1C-208ENST00000487086 RBM17Q96I25 401 aaKnown RBP21.24■□□□□ 0.99
NSFL1C-208ENST00000487086 CDHR2Q9BYE9 1310 aa21.24■□□□□ 0.99
NSFL1C-208ENST00000487086 TRAF5O00463 557 aa21.23■□□□□ 0.99
NSFL1C-208ENST00000487086 IRS4O14654 1257 aaPredicted RBP21.23■□□□□ 0.99
NSFL1C-208ENST00000487086 LMOD1P29536 600 aaPredicted RBP21.23■□□□□ 0.99
NSFL1C-208ENST00000487086 RARSP54136 660 aaKnown RBP21.23■□□□□ 0.99
NSFL1C-208ENST00000487086 BRPF1P55201 1214 aaPredicted RBP21.23■□□□□ 0.99
NSFL1C-208ENST00000487086 CRAMP1Q96RY5 1269 aa21.23■□□□□ 0.99
NSFL1C-208ENST00000487086 LRRC37AA6NMS7 1700 aa21.22■□□□□ 0.99
NSFL1C-208ENST00000487086 GCKRQ14397 625 aa21.22■□□□□ 0.99
NSFL1C-208ENST00000487086 ABCC4O15439 1325 aa21.22■□□□□ 0.99
NSFL1C-208ENST00000487086 THSD7BQ9C0I4 1608 aa21.22■□□□□ 0.99
NSFL1C-208ENST00000487086 GRM1Q13255 1194 aa21.21■□□□□ 0.99
NSFL1C-208ENST00000487086 SF3B3Q15393 1217 aaKnown RBP21.21■□□□□ 0.99
NSFL1C-208ENST00000487086 AOC3Q16853 763 aa21.21■□□□□ 0.99
NSFL1C-208ENST00000487086 CST9Q5W186 159 aa21.21■□□□□ 0.99
NSFL1C-208ENST00000487086 JARID2Q92833 1246 aaPredicted RBP21.21■□□□□ 0.99
NSFL1C-208ENST00000487086 H7C1W4 665 aa21.2■□□□□ 0.98
NSFL1C-208ENST00000487086 PPIP5K2O43314 1243 aa21.2■□□□□ 0.98
NSFL1C-208ENST00000487086 CASP7P55210 303 aa21.2■□□□□ 0.98
NSFL1C-208ENST00000487086 CYP4F22Q6NT55 531 aa21.2■□□□□ 0.98
NSFL1C-208ENST00000487086 PAXIP1Q6ZW49 1069 aaPredicted RBP21.2■□□□□ 0.98
NSFL1C-208ENST00000487086 NIM1KQ8IY84 436 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms