RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 TAF7LQ5H9L4 462 aa8.67□□□□□ -1.02
UBR4-214ENST00000486515 RTL5Q5HYW3 569 aaPredicted RBP8.67□□□□□ -1.02
UBR4-214ENST00000486515 ZNF831Q5JPB2 1677 aa8.67□□□□□ -1.02
UBR4-214ENST00000486515 UBE3BQ7Z3V4 1068 aa8.67□□□□□ -1.02
UBR4-214ENST00000486515 NLRP10Q86W26 655 aa8.67□□□□□ -1.02
UBR4-214ENST00000486515 TAF1LQ8IZX4 1826 aa8.67□□□□□ -1.02
UBR4-214ENST00000486515 CNBD1Q8NA66 436 aa8.67□□□□□ -1.02
UBR4-214ENST00000486515 ZBTB38Q8NAP3 1195 aaPredicted RBP8.67□□□□□ -1.02
UBR4-214ENST00000486515 CARMIL3Q8ND23 1372 aa8.67□□□□□ -1.02
UBR4-214ENST00000486515 SH3TC1Q8TE82 1336 aa8.67□□□□□ -1.02
UBR4-214ENST00000486515 ISCA1Q9BUE6 129 aa8.67□□□□□ -1.02
UBR4-214ENST00000486515 RWDD1Q9H446 243 aaPredicted RBP8.67□□□□□ -1.02
UBR4-214ENST00000486515 TNNQ9UQP3 1299 aa8.67□□□□□ -1.02
UBR4-214ENST00000486515 C4BP0C0L5 1744 aa8.66□□□□□ -1.02
UBR4-214ENST00000486515 QSER1Q2KHR3 1735 aa8.66□□□□□ -1.02
UBR4-214ENST00000486515 ZBTB7BO15156 539 aaPredicted RBP8.66□□□□□ -1.02
UBR4-214ENST00000486515 IGKV5-2P06315 115 aa8.66□□□□□ -1.02
UBR4-214ENST00000486515 GYS1P13807 737 aa8.66□□□□□ -1.02
UBR4-214ENST00000486515 TBC1D9BQ66K14 1250 aa8.66□□□□□ -1.02
UBR4-214ENST00000486515 SMIM5Q71RC9 77 aa8.66□□□□□ -1.02
UBR4-214ENST00000486515 RPAP2Q8IXW5 612 aaPredicted RBP8.66□□□□□ -1.02
UBR4-214ENST00000486515 ZNF34Q8IZ26 560 aa8.66□□□□□ -1.02
UBR4-214ENST00000486515 NLRP3Q96P20 1036 aa8.66□□□□□ -1.02
UBR4-214ENST00000486515 TMX4Q9H1E5 349 aaPredicted RBP8.66□□□□□ -1.02
UBR4-214ENST00000486515 PPP4R2Q9NY27 417 aa8.66□□□□□ -1.02
UBR4-214ENST00000486515 GTF3C3Q9Y5Q9 886 aa8.66□□□□□ -1.02
UBR4-214ENST00000486515 TUBGCP6Q96RT7 1819 aa8.66□□□□□ -1.02
UBR4-214ENST00000486515 IRS4O14654 1257 aaPredicted RBP8.65□□□□□ -1.02
UBR4-214ENST00000486515 PDE8AO60658 829 aa8.65□□□□□ -1.02
UBR4-214ENST00000486515 SERPINB2P05120 415 aa8.65□□□□□ -1.02
UBR4-214ENST00000486515 CCDC57Q2TAC2 916 aa8.65□□□□□ -1.02
UBR4-214ENST00000486515 SUSD4Q5VX71 490 aa8.65□□□□□ -1.02
UBR4-214ENST00000486515 FAM89AQ96GI7 184 aa8.65□□□□□ -1.02
UBR4-214ENST00000486515 MEIS3Q99687 375 aa8.65□□□□□ -1.02
UBR4-214ENST00000486515 USP44Q9H0E7 712 aa8.65□□□□□ -1.02
UBR4-214ENST00000486515 ZBTB40Q9NUA8 1239 aa8.65□□□□□ -1.02
UBR4-214ENST00000486515 RNF181Q9P0P0 153 aa8.65□□□□□ -1.02
UBR4-214ENST00000486515 ZNF219Q9P2Y4 722 aaPredicted RBP8.65□□□□□ -1.02
UBR4-214ENST00000486515 H7C1W4 665 aa8.64□□□□□ -1.03
UBR4-214ENST00000486515 MMP10P09238 476 aa8.64□□□□□ -1.03
UBR4-214ENST00000486515 NBPF7P0C2Y1 421 aaPredicted RBP8.64□□□□□ -1.03
UBR4-214ENST00000486515 OS9Q13438 667 aaPredicted RBP8.64□□□□□ -1.03
UBR4-214ENST00000486515 NFIXQ14938 502 aa8.64□□□□□ -1.03
UBR4-214ENST00000486515 CCDC152Q4G0S7 254 aa8.64□□□□□ -1.03
UBR4-214ENST00000486515 HSP90AB4PQ58FF6 505 aa8.64□□□□□ -1.03
UBR4-214ENST00000486515 BEGAINQ9BUH8 593 aa8.64□□□□□ -1.03
UBR4-214ENST00000486515 LRRFIP2Q9Y608 721 aaKnown RBP8.64□□□□□ -1.03
UBR4-214ENST00000486515 TNRC6CQ9HCJ0 1690 aaKnown RBP8.64□□□□□ -1.03
UBR4-214ENST00000486515 N4BP2Q86UW6 1770 aaPredicted RBP8.63□□□□□ -1.03
UBR4-214ENST00000486515 IBTKQ9P2D0 1353 aaPredicted RBP8.63□□□□□ -1.03
UBR4-214ENST00000486515 CDHR2Q9BYE9 1310 aa8.63□□□□□ -1.03
UBR4-214ENST00000486515 SRGAP3O43295 1099 aa8.63□□□□□ -1.03
UBR4-214ENST00000486515 PDE6BP35913 854 aa8.63□□□□□ -1.03
UBR4-214ENST00000486515 IFIT5Q13325 482 aaKnown RBP8.63□□□□□ -1.03
UBR4-214ENST00000486515 DGKZQ13574 1117 aa8.63□□□□□ -1.03
UBR4-214ENST00000486515 CNKSR2Q8WXI2 1034 aa8.63□□□□□ -1.03
UBR4-214ENST00000486515 RPGRQ92834 1020 aaKnown RBP8.63□□□□□ -1.03
UBR4-214ENST00000486515 C1orf115Q9H7X2 142 aa8.63□□□□□ -1.03
UBR4-214ENST00000486515 PDZRN3Q9UPQ7 1066 aa8.63□□□□□ -1.03
UBR4-214ENST00000486515 ARFGEF2Q9Y6D5 1785 aa8.63□□□□□ -1.03
UBR4-214ENST00000486515 C4AP0C0L4 1744 aa8.63□□□□□ -1.03
UBR4-214ENST00000486515 MYH14Q7Z406 1995 aaKnown RBP8.62□□□□□ -1.03
UBR4-214ENST00000486515 UTYO14607 1347 aa8.62□□□□□ -1.03
UBR4-214ENST00000486515 UBN2Q6ZU65 1347 aa8.62□□□□□ -1.03
UBR4-214ENST00000486515 ANKRD18BA2A2Z9 1011 aa8.62□□□□□ -1.03
UBR4-214ENST00000486515 NTSR2O95665 410 aa8.62□□□□□ -1.03
UBR4-214ENST00000486515 TM4SF1P30408 202 aa8.62□□□□□ -1.03
UBR4-214ENST00000486515 IGHMBP2P38935 993 aaKnown RBP8.62□□□□□ -1.03
UBR4-214ENST00000486515 CTSWP56202 376 aa8.62□□□□□ -1.03
UBR4-214ENST00000486515 G3BP1Q13283 466 aaKnown RBP eCLIP8.62□□□□□ -1.03
UBR4-214ENST00000486515 LMBR1LQ6UX01 489 aa8.62□□□□□ -1.03
UBR4-214ENST00000486515 DDX46Q7L014 1031 aaKnown RBP8.62□□□□□ -1.03
UBR4-214ENST00000486515 AMIGO3Q86WK7 504 aa8.62□□□□□ -1.03
UBR4-214ENST00000486515 NUTM1Q86Y26 1132 aa8.62□□□□□ -1.03
UBR4-214ENST00000486515 JARID2Q92833 1246 aaPredicted RBP8.62□□□□□ -1.03
UBR4-214ENST00000486515 SUCLG2Q96I99 432 aa8.62□□□□□ -1.03
UBR4-214ENST00000486515 CDC5LQ99459 802 aaKnown RBP8.62□□□□□ -1.03
UBR4-214ENST00000486515 BICC1Q9H694 974 aaKnown RBP8.62□□□□□ -1.03
UBR4-214ENST00000486515 BCL2L12Q9HB09 334 aa8.62□□□□□ -1.03
UBR4-214ENST00000486515 POLRMTO00411 1230 aaKnown RBP8.61□□□□□ -1.03
UBR4-214ENST00000486515 HCLS1P14317 486 aaPredicted RBP8.61□□□□□ -1.03
UBR4-214ENST00000486515 ATP8B2P98198 1209 aa8.61□□□□□ -1.03
UBR4-214ENST00000486515 ERFEQ4G0M1 354 aa8.61□□□□□ -1.03
UBR4-214ENST00000486515 CEP85Q6P2H3 762 aa8.61□□□□□ -1.03
UBR4-214ENST00000486515 ANKRD44Q8N8A2 993 aa8.61□□□□□ -1.03
UBR4-214ENST00000486515 RBM17Q96I25 401 aaKnown RBP8.61□□□□□ -1.03
UBR4-214ENST00000486515 MPHOSPH8Q99549 860 aa8.61□□□□□ -1.03
UBR4-214ENST00000486515 BCORQ6W2J9 1755 aa8.61□□□□□ -1.03
UBR4-214ENST00000486515 UBR3Q6ZT12 1888 aa8.6□□□□□ -1.03
UBR4-214ENST00000486515 SCN7AQ01118 1682 aa8.6□□□□□ -1.03
UBR4-214ENST00000486515 AFDNP55196 1824 aaKnown RBP8.6□□□□□ -1.03
UBR4-214ENST00000486515 H0YIN7 160 aa8.6□□□□□ -1.03
UBR4-214ENST00000486515 NPM3O75607 178 aaKnown RBP8.6□□□□□ -1.03
UBR4-214ENST00000486515 SURF6O75683 361 aaKnown RBP8.6□□□□□ -1.03
UBR4-214ENST00000486515 PRR5LQ6MZQ0 368 aa8.6□□□□□ -1.03
UBR4-214ENST00000486515 CHADLQ6NUI6 762 aa8.6□□□□□ -1.03
UBR4-214ENST00000486515 CENPQQ7L2Z9 268 aaPredicted RBP8.6□□□□□ -1.03
UBR4-214ENST00000486515 ERC1Q8IUD2 1116 aa8.6□□□□□ -1.03
UBR4-214ENST00000486515 ANKRD18AQ8IVF6 992 aa8.6□□□□□ -1.03
UBR4-214ENST00000486515 CCDC85AQ96PX6 553 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms