RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 TGFB2P61812 414 aa15.97■□□□□ 0.15
HDAC7-223ENST00000485796 SF3B3Q15393 1217 aaKnown RBP15.97■□□□□ 0.15
HDAC7-223ENST00000485796 ZNF622Q969S3 477 aaKnown RBP eCLIP15.97■□□□□ 0.15
HDAC7-223ENST00000485796 BICC1Q9H694 974 aaKnown RBP15.97■□□□□ 0.15
HDAC7-223ENST00000485796 SEC31BQ9NQW1 1179 aa15.97■□□□□ 0.15
HDAC7-223ENST00000485796 COL11A2P13942 1736 aaPredicted RBP15.97■□□□□ 0.15
HDAC7-223ENST00000485796 H0YIN7 160 aa15.96■□□□□ 0.15
HDAC7-223ENST00000485796 CSF1RP07333 972 aa15.96■□□□□ 0.15
HDAC7-223ENST00000485796 UBTFL1P0CB47 393 aaPredicted RBP15.96■□□□□ 0.15
HDAC7-223ENST00000485796 LMBR1LQ6UX01 489 aa15.96■□□□□ 0.15
HDAC7-223ENST00000485796 GREM2Q9H772 168 aa15.96■□□□□ 0.15
HDAC7-223ENST00000485796 FAM161AQ3B820 660 aa15.95■□□□□ 0.14
HDAC7-223ENST00000485796 MASTLQ96GX5 879 aa15.95■□□□□ 0.14
HDAC7-223ENST00000485796 LAMB2P55268 1798 aa15.95■□□□□ 0.14
HDAC7-223ENST00000485796 GNAI3P08754 354 aa15.94■□□□□ 0.14
HDAC7-223ENST00000485796 NPR1P16066 1061 aa15.94■□□□□ 0.14
HDAC7-223ENST00000485796 HOXA10P31260 410 aaPredicted RBP15.94■□□□□ 0.14
HDAC7-223ENST00000485796 OLFM4Q6UX06 510 aa15.94■□□□□ 0.14
HDAC7-223ENST00000485796 EXOC6Q8TAG9 804 aa15.94■□□□□ 0.14
HDAC7-223ENST00000485796 CELF1Q92879 486 aaKnown RBP15.94■□□□□ 0.14
HDAC7-223ENST00000485796 ZBTB40Q9NUA8 1239 aa15.94■□□□□ 0.14
HDAC7-223ENST00000485796 TAF1P21675 1872 aa15.93■□□□□ 0.14
HDAC7-223ENST00000485796 GNAI2P04899 355 aa15.93■□□□□ 0.14
HDAC7-223ENST00000485796 RABL6Q3YEC7 729 aaPredicted RBP15.93■□□□□ 0.14
HDAC7-223ENST00000485796 STYK1Q6J9G0 422 aa15.93■□□□□ 0.14
HDAC7-223ENST00000485796 RPGRQ92834 1020 aaKnown RBP15.93■□□□□ 0.14
HDAC7-223ENST00000485796 ZNF594Q96JF6 807 aaPredicted RBP15.93■□□□□ 0.14
HDAC7-223ENST00000485796 ZNF219Q9P2Y4 722 aaPredicted RBP15.93■□□□□ 0.14
HDAC7-223ENST00000485796 DDX19BQ9UMR2 479 aa15.93■□□□□ 0.14
HDAC7-223ENST00000485796 CHMP3Q9Y3E7 222 aa15.93■□□□□ 0.14
HDAC7-223ENST00000485796 CCDC152Q4G0S7 254 aa15.92■□□□□ 0.14
HDAC7-223ENST00000485796 KLHDC4Q8TBB5 520 aa15.92■□□□□ 0.14
HDAC7-223ENST00000485796 RBM17Q96I25 401 aaKnown RBP15.92■□□□□ 0.14
HDAC7-223ENST00000485796 ITGA6P23229 1130 aa15.91■□□□□ 0.14
HDAC7-223ENST00000485796 DDX46Q7L014 1031 aaKnown RBP15.91■□□□□ 0.14
HDAC7-223ENST00000485796 CRAMP1Q96RY5 1269 aa15.91■□□□□ 0.14
HDAC7-223ENST00000485796 PIM2Q9P1W9 311 aa15.91■□□□□ 0.14
HDAC7-223ENST00000485796 GOLGB1Q14789 3259 aaKnown RBP15.91■□□□□ 0.14
HDAC7-223ENST00000485796 PNMA6EA0A0J9YXQ4 647 aa15.9■□□□□ 0.14
HDAC7-223ENST00000485796 HSP90B1P14625 803 aaKnown RBP15.9■□□□□ 0.14
HDAC7-223ENST00000485796 RFX5P48382 616 aaPredicted RBP15.9■□□□□ 0.14
HDAC7-223ENST00000485796 PRPF40BQ6NWY9 871 aaKnown RBP15.9■□□□□ 0.14
HDAC7-223ENST00000485796 TTLL6Q8N841 843 aa15.9■□□□□ 0.14
HDAC7-223ENST00000485796 PDZRN3Q9UPQ7 1066 aa15.9■□□□□ 0.14
HDAC7-223ENST00000485796 SLX4Q8IY92 1834 aa15.89■□□□□ 0.13
HDAC7-223ENST00000485796 YBX3P16989 372 aaKnown RBP eCLIP15.89■□□□□ 0.13
HDAC7-223ENST00000485796 GRAPQ13588 217 aa15.89■□□□□ 0.13
HDAC7-223ENST00000485796 DALRD3Q5D0E6 543 aaKnown RBP15.89■□□□□ 0.13
HDAC7-223ENST00000485796 SIRT2Q8IXJ6 389 aa15.89■□□□□ 0.13
HDAC7-223ENST00000485796 GRAPLQ8TC17 118 aaPredicted RBP15.89■□□□□ 0.13
HDAC7-223ENST00000485796 C7orf43Q8WVR3 580 aa15.89■□□□□ 0.13
HDAC7-223ENST00000485796 CNKSR1Q969H4 720 aa15.89■□□□□ 0.13
HDAC7-223ENST00000485796 BCS1LQ9Y276 419 aa15.89■□□□□ 0.13
HDAC7-223ENST00000485796 RTL9Q8NET4 1388 aa15.88■□□□□ 0.13
HDAC7-223ENST00000485796 MYH3P11055 1940 aa15.88■□□□□ 0.13
HDAC7-223ENST00000485796 C21orf2O43822 256 aa15.88■□□□□ 0.13
HDAC7-223ENST00000485796 NEFLP07196 543 aa15.88■□□□□ 0.13
HDAC7-223ENST00000485796 RPS8P62241 208 aaKnown RBP15.88■□□□□ 0.13
HDAC7-223ENST00000485796 ATP8B2P98198 1209 aa15.88■□□□□ 0.13
HDAC7-223ENST00000485796 CEP85Q6P2H3 762 aa15.88■□□□□ 0.13
HDAC7-223ENST00000485796 PELP1Q8IZL8 1130 aaKnown RBP15.88■□□□□ 0.13
HDAC7-223ENST00000485796 PUS3Q9BZE2 481 aaKnown RBP15.88■□□□□ 0.13
HDAC7-223ENST00000485796 CHMP4BQ9H444 224 aaKnown RBP15.88■□□□□ 0.13
HDAC7-223ENST00000485796 PA2G4Q9UQ80 394 aaKnown RBP15.88■□□□□ 0.13
HDAC7-223ENST00000485796 PCDHB15Q9Y5E8 787 aa15.88■□□□□ 0.13
HDAC7-223ENST00000485796 DLEC1Q9Y238 1755 aa15.87■□□□□ 0.13
HDAC7-223ENST00000485796 ANKRD18BA2A2Z9 1011 aa15.87■□□□□ 0.13
HDAC7-223ENST00000485796 PPEF1O14829 653 aaPredicted RBP15.87■□□□□ 0.13
HDAC7-223ENST00000485796 ALDH1B1P30837 517 aa15.87■□□□□ 0.13
HDAC7-223ENST00000485796 IFIT5Q13325 482 aaKnown RBP15.87■□□□□ 0.13
HDAC7-223ENST00000485796 HDAC5Q9UQL6 1122 aa15.87■□□□□ 0.13
HDAC7-223ENST00000485796 BRCA1P38398 1863 aaKnown RBP15.86■□□□□ 0.13
HDAC7-223ENST00000485796 WTIPA6NIX2 430 aaPredicted RBP15.86■□□□□ 0.13
HDAC7-223ENST00000485796 SRGAP3O43295 1099 aa15.86■□□□□ 0.13
HDAC7-223ENST00000485796 PTPN12Q05209 780 aaKnown RBP15.86■□□□□ 0.13
HDAC7-223ENST00000485796 MTX1Q13505 466 aa15.86■□□□□ 0.13
HDAC7-223ENST00000485796 CCDC57Q2TAC2 916 aa15.86■□□□□ 0.13
HDAC7-223ENST00000485796 UTRNP46939 3433 aa15.86■□□□□ 0.13
HDAC7-223ENST00000485796 BBOX1O75936 387 aa15.85■□□□□ 0.13
HDAC7-223ENST00000485796 LRRC24Q50LG9 513 aa15.85■□□□□ 0.13
HDAC7-223ENST00000485796 ANKRD18AQ8IVF6 992 aa15.85■□□□□ 0.13
HDAC7-223ENST00000485796 POLA2Q14181 598 aa15.84■□□□□ 0.13
HDAC7-223ENST00000485796 SSH3Q8TE77 659 aa15.84■□□□□ 0.13
HDAC7-223ENST00000485796 CDC5LQ99459 802 aaKnown RBP15.84■□□□□ 0.13
HDAC7-223ENST00000485796 SIL1Q9H173 461 aa15.84■□□□□ 0.13
HDAC7-223ENST00000485796 ATP6V0A2Q9Y487 856 aa15.84■□□□□ 0.13
HDAC7-223ENST00000485796 CACNA1SQ13698 1873 aa15.84■□□□□ 0.13
HDAC7-223ENST00000485796 IGHMBP2P38935 993 aaKnown RBP15.83■□□□□ 0.12
HDAC7-223ENST00000485796 GPSM2P81274 684 aa15.83■□□□□ 0.12
HDAC7-223ENST00000485796 GPR162Q16538 588 aa15.83■□□□□ 0.12
HDAC7-223ENST00000485796 TAF7LQ5H9L4 462 aa15.83■□□□□ 0.12
HDAC7-223ENST00000485796 SP8Q8IXZ3 490 aa15.83■□□□□ 0.12
HDAC7-223ENST00000485796 HELBQ8NG08 1087 aaPredicted RBP15.83■□□□□ 0.12
HDAC7-223ENST00000485796 BSDC1Q9NW68 430 aaPredicted RBP15.83■□□□□ 0.12
HDAC7-223ENST00000485796 MINPP1Q9UNW1 487 aa15.83■□□□□ 0.12
HDAC7-223ENST00000485796 SNAP23O00161 211 aa15.82■□□□□ 0.12
HDAC7-223ENST00000485796 PRELPP51888 382 aa15.82■□□□□ 0.12
HDAC7-223ENST00000485796 LDHAL6AQ6ZMR3 332 aa15.82■□□□□ 0.12
HDAC7-223ENST00000485796 ATG9AQ7Z3C6 839 aa15.82■□□□□ 0.12
HDAC7-223ENST00000485796 GPR101Q96P66 508 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms