RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 PLAURQ03405 335 aa7.11□□□□□ -1.27
SPTA1-206ENST00000484520 GRIK5Q16478 980 aa7.11□□□□□ -1.27
SPTA1-206ENST00000484520 RTN1Q16799 776 aa7.11□□□□□ -1.27
SPTA1-206ENST00000484520 FBXO11Q86XK2 927 aa7.11□□□□□ -1.27
SPTA1-206ENST00000484520 LPIN3Q9BQK8 851 aa7.11□□□□□ -1.27
SPTA1-206ENST00000484520 ZBTB42B2RXF5 422 aa7.1□□□□□ -1.27
SPTA1-206ENST00000484520 UBTFP17480 764 aaKnown RBP7.1□□□□□ -1.27
SPTA1-206ENST00000484520 NOS3P29474 1203 aa7.1□□□□□ -1.27
SPTA1-206ENST00000484520 PCSK7Q16549 785 aa7.1□□□□□ -1.27
SPTA1-206ENST00000484520 PERM1Q5SV97 790 aa7.1□□□□□ -1.27
SPTA1-206ENST00000484520 KRT25Q7Z3Z0 450 aa7.1□□□□□ -1.27
SPTA1-206ENST00000484520 DTWD1Q8N5C7 304 aa7.1□□□□□ -1.27
SPTA1-206ENST00000484520 HINFPQ9BQA5 517 aa7.1□□□□□ -1.27
SPTA1-206ENST00000484520 CUX2O14529 1486 aa7.1□□□□□ -1.27
SPTA1-206ENST00000484520 EPB42P16452 691 aa7.09□□□□□ -1.27
SPTA1-206ENST00000484520 FRRS1LQ9P0K9 344 aa7.09□□□□□ -1.27
SPTA1-206ENST00000484520 ZFATQ9P243 1243 aa7.09□□□□□ -1.27
SPTA1-206ENST00000484520 MAP3K6O95382 1288 aa7.08□□□□□ -1.28
SPTA1-206ENST00000484520 TARSP26639 723 aaKnown RBP7.08□□□□□ -1.28
SPTA1-206ENST00000484520 INPP5BP32019 993 aa7.08□□□□□ -1.28
SPTA1-206ENST00000484520 IDH3AP50213 366 aa7.08□□□□□ -1.28
SPTA1-206ENST00000484520 MLLT1Q03111 559 aaPredicted RBP7.08□□□□□ -1.28
SPTA1-206ENST00000484520 ELMSAN1Q6PJG2 1045 aa7.08□□□□□ -1.28
SPTA1-206ENST00000484520 DHX32Q7L7V1 743 aaKnown RBP7.08□□□□□ -1.28
SPTA1-206ENST00000484520 WFDC8Q8IUA0 241 aa7.08□□□□□ -1.28
SPTA1-206ENST00000484520 MEGF10Q96KG7 1140 aa7.08□□□□□ -1.28
SPTA1-206ENST00000484520 KLK14Q9P0G3 267 aa7.08□□□□□ -1.28
SPTA1-206ENST00000484520 RNF112Q9ULX5 631 aa7.08□□□□□ -1.28
SPTA1-206ENST00000484520 CFTRP13569 1480 aa7.08□□□□□ -1.28
SPTA1-206ENST00000484520 IGF2-ASQ6U949 168 aa7.07□□□□□ -1.28
SPTA1-206ENST00000484520 TRPM4Q8TD43 1214 aa7.07□□□□□ -1.28
SPTA1-206ENST00000484520 IFT43Q96FT9 208 aa7.07□□□□□ -1.28
SPTA1-206ENST00000484520 TFIP11Q9UBB9 837 aaKnown RBP7.07□□□□□ -1.28
SPTA1-206ENST00000484520 CADPSQ9ULU8 1353 aa7.07□□□□□ -1.28
SPTA1-206ENST00000484520 DEAF1O75398 565 aaPredicted RBP7.06□□□□□ -1.28
SPTA1-206ENST00000484520 SASH3O75995 380 aa7.06□□□□□ -1.28
SPTA1-206ENST00000484520 KRTAP9-9Q9BYP9 154 aa7.06□□□□□ -1.28
SPTA1-206ENST00000484520 KRTAP9-4Q9BYQ2 154 aa7.06□□□□□ -1.28
SPTA1-206ENST00000484520 RARAP10276 462 aa7.05□□□□□ -1.28
SPTA1-206ENST00000484520 IGFBP4P22692 258 aa7.05□□□□□ -1.28
SPTA1-206ENST00000484520 LARP1Q6PKG0 1096 aaKnown RBP7.05□□□□□ -1.28
SPTA1-206ENST00000484520 PRR23CQ6ZRP0 262 aa7.05□□□□□ -1.28
SPTA1-206ENST00000484520 HFE2Q6ZVN8 426 aa7.05□□□□□ -1.28
SPTA1-206ENST00000484520 TTC9Q92623 222 aa7.05□□□□□ -1.28
SPTA1-206ENST00000484520 SMG9Q9H0W8 520 aaKnown RBP7.05□□□□□ -1.28
SPTA1-206ENST00000484520 MAFBQ9Y5Q3 323 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-206ENST00000484520 ERCC6Q03468 1493 aa7.04□□□□□ -1.28
SPTA1-206ENST00000484520 ARSDP51689 593 aa7.04□□□□□ -1.28
SPTA1-206ENST00000484520 GPLD1P80108 840 aa7.04□□□□□ -1.28
SPTA1-206ENST00000484520 DPYDQ12882 1025 aa7.04□□□□□ -1.28
SPTA1-206ENST00000484520 FLIIQ13045 1269 aa7.04□□□□□ -1.28
SPTA1-206ENST00000484520 DGKZQ13574 1117 aa7.04□□□□□ -1.28
SPTA1-206ENST00000484520 CRTC2Q53ET0 693 aaPredicted RBP7.04□□□□□ -1.28
SPTA1-206ENST00000484520 DLL1O00548 723 aa7.03□□□□□ -1.28
SPTA1-206ENST00000484520 PTK7Q13308 1070 aa7.03□□□□□ -1.28
SPTA1-206ENST00000484520 MICAL2O94851 1124 aa7.02□□□□□ -1.29
SPTA1-206ENST00000484520 ALX3O95076 343 aa7.02□□□□□ -1.29
SPTA1-206ENST00000484520 EIF2AK2P19525 551 aaKnown RBP7.02□□□□□ -1.29
SPTA1-206ENST00000484520 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
SPTA1-206ENST00000484520 DZIP1LQ8IYY4 767 aaKnown RBP7.02□□□□□ -1.29
SPTA1-206ENST00000484520 GLMNQ92990 594 aa7.02□□□□□ -1.29
SPTA1-206ENST00000484520 AKTIPQ9H8T0 292 aa7.02□□□□□ -1.29
SPTA1-206ENST00000484520 QTRT2Q9H974 415 aaKnown RBP7.02□□□□□ -1.29
SPTA1-206ENST00000484520 C11orf16Q9NQ32 467 aa7.02□□□□□ -1.29
SPTA1-206ENST00000484520 PCMTD2Q9NV79 361 aa7.02□□□□□ -1.29
SPTA1-206ENST00000484520 USP20Q9Y2K6 914 aa7.02□□□□□ -1.29
SPTA1-206ENST00000484520 LAMC3Q9Y6N6 1575 aa7.02□□□□□ -1.29
SPTA1-206ENST00000484520 NRLP54845 237 aa7.01□□□□□ -1.29
SPTA1-206ENST00000484520 WRNQ14191 1432 aaPredicted RBP eCLIP7.01□□□□□ -1.29
SPTA1-206ENST00000484520 PDS5BQ9NTI5 1447 aa7.01□□□□□ -1.29
SPTA1-206ENST00000484520 BTBD11A6QL63 1104 aa7□□□□□ -1.29
SPTA1-206ENST00000484520 J3QW42 95 aa7□□□□□ -1.29
SPTA1-206ENST00000484520 FSTP19883 344 aa7□□□□□ -1.29
SPTA1-206ENST00000484520 ARID4AP29374 1257 aaPredicted RBP7□□□□□ -1.29
SPTA1-206ENST00000484520 SSTR4P31391 388 aa7□□□□□ -1.29
SPTA1-206ENST00000484520 C11orf91Q3C1V1 193 aa7□□□□□ -1.29
SPTA1-206ENST00000484520 KANK4Q5T7N3 995 aaPredicted RBP7□□□□□ -1.29
SPTA1-206ENST00000484520 MCTP1Q6DN14 999 aa7□□□□□ -1.29
SPTA1-206ENST00000484520 ANKMY2Q8IV38 441 aa7□□□□□ -1.29
SPTA1-206ENST00000484520 TLR7Q9NYK1 1049 aaKnown RBP7□□□□□ -1.29
SPTA1-206ENST00000484520 RTCBQ9Y3I0 505 aaKnown RBP7□□□□□ -1.29
SPTA1-206ENST00000484520 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 USP17L15C9J2P7 530 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 USP17L10C9JJH3 530 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 USP17L13C9JLJ4 530 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 USP17L12C9JPN9 530 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 USP17L11C9JVI0 530 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 USP17L21D6R901 530 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 USP17L18D6R9N7 530 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 USP17L22D6RA61 530 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 USP17L17D6RBQ6 530 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 USP17L19D6RCP7 530 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 USP17L20D6RJB6 530 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 OPLAHO14841 1288 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 USP17L24Q0WX57 530 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 GDF6Q6KF10 455 aaPredicted RBP6.99□□□□□ -1.29
SPTA1-206ENST00000484520 PLD4Q96BZ4 506 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 MRPL18Q9H0U6 180 aaKnown RBP6.99□□□□□ -1.29
SPTA1-206ENST00000484520 GOLGA2P5Q9HBQ8 144 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 EEA1Q15075 1411 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 631.6 ms