RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 RTL5Q5HYW3 569 aaPredicted RBP21.5■■□□□ 1.03
RAB11FIP3-209ENST00000483002 ZNRF3Q9ULT6 936 aa21.5■■□□□ 1.03
RAB11FIP3-209ENST00000483002 LAMB2P55268 1798 aa21.5■■□□□ 1.03
RAB11FIP3-209ENST00000483002 GNAI1P63096 354 aa21.49■■□□□ 1.03
RAB11FIP3-209ENST00000483002 CALD1Q05682 793 aaKnown RBP21.49■■□□□ 1.03
RAB11FIP3-209ENST00000483002 CXCL9Q07325 125 aa21.49■■□□□ 1.03
RAB11FIP3-209ENST00000483002 IFT57Q9NWB7 429 aa21.49■■□□□ 1.03
RAB11FIP3-209ENST00000483002 CNTNAP1P78357 1384 aa21.48■■□□□ 1.03
RAB11FIP3-209ENST00000483002 TAF1P21675 1872 aa21.48■■□□□ 1.03
RAB11FIP3-209ENST00000483002 RIC3Q7Z5B4 369 aa21.48■■□□□ 1.03
RAB11FIP3-209ENST00000483002 ADAMTSL1Q8N6G6 1762 aa21.48■■□□□ 1.03
RAB11FIP3-209ENST00000483002 KIAA2012Q0VF49 1180 aa21.47■■□□□ 1.03
RAB11FIP3-209ENST00000483002 TNS4Q8IZW8 715 aa21.47■■□□□ 1.03
RAB11FIP3-209ENST00000483002 PHAXQ9H814 394 aaKnown RBP21.47■■□□□ 1.03
RAB11FIP3-209ENST00000483002 LTBP1Q14766 1721 aa21.46■■□□□ 1.03
RAB11FIP3-209ENST00000483002 VEGFBP49765 207 aa21.46■■□□□ 1.03
RAB11FIP3-209ENST00000483002 GOLGA2Q08379 1002 aa21.46■■□□□ 1.03
RAB11FIP3-209ENST00000483002 SF3B3Q15393 1217 aaKnown RBP21.46■■□□□ 1.03
RAB11FIP3-209ENST00000483002 USP50Q70EL3 339 aaPredicted RBP21.46■■□□□ 1.03
RAB11FIP3-209ENST00000483002 TMC4Q7Z404 712 aa21.46■■□□□ 1.03
RAB11FIP3-209ENST00000483002 GPRC5DQ9NZD1 345 aa21.46■■□□□ 1.03
RAB11FIP3-209ENST00000483002 IRS4O14654 1257 aaPredicted RBP21.45■■□□□ 1.02
RAB11FIP3-209ENST00000483002 TRIM28Q13263 835 aaKnown RBP21.45■■□□□ 1.02
RAB11FIP3-209ENST00000483002 CIAPIN1Q6FI81 312 aa21.45■■□□□ 1.02
RAB11FIP3-209ENST00000483002 C8orf58Q8NAV2 365 aa21.45■■□□□ 1.02
RAB11FIP3-209ENST00000483002 CELF1Q92879 486 aaKnown RBP21.45■■□□□ 1.02
RAB11FIP3-209ENST00000483002 RAD17O75943 681 aa21.44■■□□□ 1.02
RAB11FIP3-209ENST00000483002 GMPSP49915 693 aaPredicted RBP21.44■■□□□ 1.02
RAB11FIP3-209ENST00000483002 FMR1Q06787 632 aaKnown RBP eCLIP21.44■■□□□ 1.02
RAB11FIP3-209ENST00000483002 DEFB115Q30KQ5 88 aa21.44■■□□□ 1.02
RAB11FIP3-209ENST00000483002 ABT1Q9ULW3 272 aaKnown RBP21.44■■□□□ 1.02
RAB11FIP3-209ENST00000483002 NSFL1CQ9UNZ2 370 aaKnown RBP21.44■■□□□ 1.02
RAB11FIP3-209ENST00000483002 BCL2L13Q9BXK5 485 aa21.43■■□□□ 1.02
RAB11FIP3-209ENST00000483002 ADARB2Q9NS39 739 aaKnown RBP21.43■■□□□ 1.02
RAB11FIP3-209ENST00000483002 TNIP1Q15025 636 aa21.42■■□□□ 1.02
RAB11FIP3-209ENST00000483002 CCDC184Q52MB2 194 aa21.42■■□□□ 1.02
RAB11FIP3-209ENST00000483002 MYD88Q99836 296 aa21.42■■□□□ 1.02
RAB11FIP3-209ENST00000483002 DDX60Q8IY21 1712 aaKnown RBP21.41■■□□□ 1.02
RAB11FIP3-209ENST00000483002 RASSF10A6NK89 507 aa21.41■■□□□ 1.02
RAB11FIP3-209ENST00000483002 CAPN15O75808 1086 aa21.41■■□□□ 1.02
RAB11FIP3-209ENST00000483002 WASHC4Q2M389 1173 aa21.41■■□□□ 1.02
RAB11FIP3-209ENST00000483002 ZBTB38Q8NAP3 1195 aaPredicted RBP21.41■■□□□ 1.02
RAB11FIP3-209ENST00000483002 YDJCA8MPS7 323 aa21.4■■□□□ 1.02
RAB11FIP3-209ENST00000483002 C6orf229H3BNL8 230 aa21.4■■□□□ 1.02
RAB11FIP3-209ENST00000483002 TRAF5O00463 557 aa21.4■■□□□ 1.02
RAB11FIP3-209ENST00000483002 RIMBP2O15034 1052 aa21.4■■□□□ 1.02
RAB11FIP3-209ENST00000483002 FOXN1O15353 648 aa21.4■■□□□ 1.02
RAB11FIP3-209ENST00000483002 RPS8P62241 208 aaKnown RBP21.4■■□□□ 1.02
RAB11FIP3-209ENST00000483002 CCDC30Q5VVM6 783 aa21.4■■□□□ 1.02
RAB11FIP3-209ENST00000483002 GPSM2P81274 684 aa21.39■■□□□ 1.01
RAB11FIP3-209ENST00000483002 TSPYL6Q8N831 410 aa21.39■■□□□ 1.01
RAB11FIP3-209ENST00000483002 JARID2Q92833 1246 aaPredicted RBP21.39■■□□□ 1.01
RAB11FIP3-209ENST00000483002 CHMP4AQ9BY43 222 aa21.39■■□□□ 1.01
RAB11FIP3-209ENST00000483002 DDX58O95786 925 aaKnown RBP21.38■■□□□ 1.01
RAB11FIP3-209ENST00000483002 CCDC191Q8NCU4 936 aa21.38■■□□□ 1.01
RAB11FIP3-209ENST00000483002 AIDAQ96BJ3 306 aa21.38■■□□□ 1.01
RAB11FIP3-209ENST00000483002 DBNDD1Q9H9R9 158 aa21.38■■□□□ 1.01
RAB11FIP3-209ENST00000483002 POLLQ9UGP5 575 aa21.38■■□□□ 1.01
RAB11FIP3-209ENST00000483002 CNOT7Q9UIV1 285 aaKnown RBP21.38■■□□□ 1.01
RAB11FIP3-209ENST00000483002 WDR33Q9C0J8 1336 aaKnown RBP21.37■■□□□ 1.01
RAB11FIP3-209ENST00000483002 HSP90B1P14625 803 aaKnown RBP21.37■■□□□ 1.01
RAB11FIP3-209ENST00000483002 CST9Q5W186 159 aa21.37■■□□□ 1.01
RAB11FIP3-209ENST00000483002 PAXIP1Q6ZW49 1069 aaPredicted RBP21.37■■□□□ 1.01
RAB11FIP3-209ENST00000483002 TSR2Q969E8 191 aaKnown RBP21.37■■□□□ 1.01
RAB11FIP3-209ENST00000483002 METTL22Q9BUU2 404 aaPredicted RBP21.37■■□□□ 1.01
RAB11FIP3-209ENST00000483002 SEC31BQ9NQW1 1179 aa21.37■■□□□ 1.01
RAB11FIP3-209ENST00000483002 H7C1D1 291 aa21.36■■□□□ 1.01
RAB11FIP3-209ENST00000483002 PCCAP05165 728 aaPredicted RBP21.36■■□□□ 1.01
RAB11FIP3-209ENST00000483002 HIRAP54198 1017 aaPredicted RBP21.36■■□□□ 1.01
RAB11FIP3-209ENST00000483002 WBP1LQ9NX94 342 aa21.36■■□□□ 1.01
RAB11FIP3-209ENST00000483002 CWC25Q9NXE8 425 aaPredicted RBP21.36■■□□□ 1.01
RAB11FIP3-209ENST00000483002 ZBTB12Q9Y330 459 aaPredicted RBP21.36■■□□□ 1.01
RAB11FIP3-209ENST00000483002 DUOX1Q9NRD9 1551 aa21.36■■□□□ 1.01
RAB11FIP3-209ENST00000483002 CDHR2Q9BYE9 1310 aa21.35■■□□□ 1.01
RAB11FIP3-209ENST00000483002 SHTN1A0MZ66 631 aa21.35■■□□□ 1.01
RAB11FIP3-209ENST00000483002 GRM1Q13255 1194 aa21.35■■□□□ 1.01
RAB11FIP3-209ENST00000483002 DOK7Q18PE1 504 aa21.35■■□□□ 1.01
RAB11FIP3-209ENST00000483002 GPR101Q96P66 508 aaPredicted RBP21.35■■□□□ 1.01
RAB11FIP3-209ENST00000483002 CCDC85AQ96PX6 553 aaPredicted RBP21.35■■□□□ 1.01
RAB11FIP3-209ENST00000483002 EYA3Q99504 573 aa21.35■■□□□ 1.01
RAB11FIP3-209ENST00000483002 GLIS2Q9BZE0 524 aaPredicted RBP21.35■■□□□ 1.01
RAB11FIP3-209ENST00000483002 MAP3K2Q9Y2U5 619 aa21.35■■□□□ 1.01
RAB11FIP3-209ENST00000483002 COL4A1P02462 1669 aa21.34■■□□□ 1.01
RAB11FIP3-209ENST00000483002 PSMD14O00487 310 aa21.34■■□□□ 1.01
RAB11FIP3-209ENST00000483002 PDE8AO60658 829 aa21.34■■□□□ 1.01
RAB11FIP3-209ENST00000483002 CTCFP49711 727 aaPredicted RBP21.34■■□□□ 1.01
RAB11FIP3-209ENST00000483002 CCDC152Q4G0S7 254 aa21.34■■□□□ 1.01
RAB11FIP3-209ENST00000483002 MICALL2Q8IY33 904 aa21.34■■□□□ 1.01
RAB11FIP3-209ENST00000483002 TBC1D16Q8TBP0 767 aa21.34■■□□□ 1.01
RAB11FIP3-209ENST00000483002 TRPM4Q8TD43 1214 aa21.34■■□□□ 1.01
RAB11FIP3-209ENST00000483002 PGAP2Q9UHJ9 254 aa21.34■■□□□ 1.01
RAB11FIP3-209ENST00000483002 LRRC37AA6NMS7 1700 aa21.34■■□□□ 1.01
RAB11FIP3-209ENST00000483002 ECE2O60344 883 aa21.33■■□□□ 1.01
RAB11FIP3-209ENST00000483002 KSR2Q6VAB6 950 aa21.33■■□□□ 1.01
RAB11FIP3-209ENST00000483002 WWC1Q8IX03 1113 aa21.33■■□□□ 1.01
RAB11FIP3-209ENST00000483002 ZC3H15Q8WU90 426 aaKnown RBP21.33■■□□□ 1.01
RAB11FIP3-209ENST00000483002 CAPNS2Q96L46 248 aa21.33■■□□□ 1.01
RAB11FIP3-209ENST00000483002 STK31Q9BXU1 1019 aa21.33■■□□□ 1.01
RAB11FIP3-209ENST00000483002 ZC3H12CQ9C0D7 883 aaKnown RBP21.33■■□□□ 1.01
RAB11FIP3-209ENST00000483002 KCNQ5Q9NR82 932 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms