RNA–Protein interactions for RNA: ENST00000482017.1

MCF2L2-211, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-211ENST00000482017 KCNA3P22001 575 aa23.59■■□□□ 1.37
MCF2L2-211ENST00000482017 RBM17Q96I25 401 aaKnown RBP23.59■■□□□ 1.37
MCF2L2-211ENST00000482017 UTYO14607 1347 aa23.59■■□□□ 1.37
MCF2L2-211ENST00000482017 KLRG2A4D1S0 409 aaPredicted RBP23.58■■□□□ 1.37
MCF2L2-211ENST00000482017 MVPQ14764 893 aaKnown RBP23.58■■□□□ 1.37
MCF2L2-211ENST00000482017 CRY2Q49AN0 593 aa23.58■■□□□ 1.37
MCF2L2-211ENST00000482017 BICC1Q9H694 974 aaKnown RBP23.58■■□□□ 1.37
MCF2L2-211ENST00000482017 PIM2Q9P1W9 311 aa23.58■■□□□ 1.37
MCF2L2-211ENST00000482017 PDZRN3Q9UPQ7 1066 aa23.58■■□□□ 1.37
MCF2L2-211ENST00000482017 BCS1LQ9Y276 419 aa23.58■■□□□ 1.37
MCF2L2-211ENST00000482017 LRRFIP2Q9Y608 721 aaKnown RBP23.58■■□□□ 1.37
MCF2L2-211ENST00000482017 COL4A1P02462 1669 aa23.57■■□□□ 1.36
MCF2L2-211ENST00000482017 FOXO4P98177 505 aa23.57■■□□□ 1.36
MCF2L2-211ENST00000482017 PDE3AQ14432 1141 aa23.57■■□□□ 1.36
MCF2L2-211ENST00000482017 CCDC152Q4G0S7 254 aa23.57■■□□□ 1.36
MCF2L2-211ENST00000482017 STYK1Q6J9G0 422 aa23.57■■□□□ 1.36
MCF2L2-211ENST00000482017 DDX46Q7L014 1031 aaKnown RBP23.57■■□□□ 1.36
MCF2L2-211ENST00000482017 PLA2G12BQ9BX93 195 aa23.57■■□□□ 1.36
MCF2L2-211ENST00000482017 C1orf115Q9H7X2 142 aa23.57■■□□□ 1.36
MCF2L2-211ENST00000482017 SEC31BQ9NQW1 1179 aa23.57■■□□□ 1.36
MCF2L2-211ENST00000482017 CENPBP07199 599 aaPredicted RBP23.56■■□□□ 1.36
MCF2L2-211ENST00000482017 GNAI3P08754 354 aa23.56■■□□□ 1.36
MCF2L2-211ENST00000482017 SF3B3Q15393 1217 aaKnown RBP23.56■■□□□ 1.36
MCF2L2-211ENST00000482017 FAM161AQ3B820 660 aa23.56■■□□□ 1.36
MCF2L2-211ENST00000482017 LMBR1LQ6UX01 489 aa23.56■■□□□ 1.36
MCF2L2-211ENST00000482017 TTLL6Q8N841 843 aa23.56■■□□□ 1.36
MCF2L2-211ENST00000482017 TTLL11Q8NHH1 800 aa23.56■■□□□ 1.36
MCF2L2-211ENST00000482017 KAZALD1Q96I82 304 aa23.56■■□□□ 1.36
MCF2L2-211ENST00000482017 GREM2Q9H772 168 aa23.56■■□□□ 1.36
MCF2L2-211ENST00000482017 ARFGEF1Q9Y6D6 1849 aa23.55■■□□□ 1.36
MCF2L2-211ENST00000482017 DALRD3Q5D0E6 543 aaKnown RBP23.55■■□□□ 1.36
MCF2L2-211ENST00000482017 CNKSR1Q969H4 720 aa23.55■■□□□ 1.36
MCF2L2-211ENST00000482017 PRPF40BQ6NWY9 871 aaKnown RBP23.54■■□□□ 1.36
MCF2L2-211ENST00000482017 SRCAPQ6ZRS2 3230 aa23.54■■□□□ 1.36
MCF2L2-211ENST00000482017 IRX6P78412 446 aaPredicted RBP23.53■■□□□ 1.36
MCF2L2-211ENST00000482017 GPR162Q16538 588 aa23.53■■□□□ 1.36
MCF2L2-211ENST00000482017 SLC51AQ86UW1 340 aa23.53■■□□□ 1.36
MCF2L2-211ENST00000482017 ANKRD44Q8N8A2 993 aa23.53■■□□□ 1.36
MCF2L2-211ENST00000482017 DDX19BQ9UMR2 479 aa23.53■■□□□ 1.36
MCF2L2-211ENST00000482017 HOXA10P31260 410 aaPredicted RBP23.52■■□□□ 1.36
MCF2L2-211ENST00000482017 CELF1Q92879 486 aaKnown RBP23.52■■□□□ 1.36
MCF2L2-211ENST00000482017 CRAMP1Q96RY5 1269 aa23.52■■□□□ 1.36
MCF2L2-211ENST00000482017 CRBNQ96SW2 442 aa23.52■■□□□ 1.36
MCF2L2-211ENST00000482017 ZBTB7BO15156 539 aaPredicted RBP23.51■■□□□ 1.35
MCF2L2-211ENST00000482017 GNAI2P04899 355 aa23.51■■□□□ 1.35
MCF2L2-211ENST00000482017 YBX3P16989 372 aaKnown RBP eCLIP23.51■■□□□ 1.35
MCF2L2-211ENST00000482017 ITGA6P23229 1130 aa23.51■■□□□ 1.35
MCF2L2-211ENST00000482017 ALDH1B1P30837 517 aa23.51■■□□□ 1.35
MCF2L2-211ENST00000482017 GRAPQ13588 217 aa23.51■■□□□ 1.35
MCF2L2-211ENST00000482017 GRAPLQ8TC17 118 aaPredicted RBP23.51■■□□□ 1.35
MCF2L2-211ENST00000482017 PPEF1O14829 653 aaPredicted RBP23.5■■□□□ 1.35
MCF2L2-211ENST00000482017 C21orf2O43822 256 aa23.5■■□□□ 1.35
MCF2L2-211ENST00000482017 CSF1RP07333 972 aa23.5■■□□□ 1.35
MCF2L2-211ENST00000482017 OLFM4Q6UX06 510 aa23.5■■□□□ 1.35
MCF2L2-211ENST00000482017 TAF7LQ5H9L4 462 aa23.49■■□□□ 1.35
MCF2L2-211ENST00000482017 HDAC5Q9UQL6 1122 aa23.49■■□□□ 1.35
MCF2L2-211ENST00000482017 ANKRD18BA2A2Z9 1011 aa23.48■■□□□ 1.35
MCF2L2-211ENST00000482017 IFIT5Q13325 482 aaKnown RBP23.48■■□□□ 1.35
MCF2L2-211ENST00000482017 CCDC57Q2TAC2 916 aa23.48■■□□□ 1.35
MCF2L2-211ENST00000482017 ANKRD18AQ8IVF6 992 aa23.48■■□□□ 1.35
MCF2L2-211ENST00000482017 ZNF594Q96JF6 807 aaPredicted RBP23.48■■□□□ 1.35
MCF2L2-211ENST00000482017 CDC5LQ99459 802 aaKnown RBP23.48■■□□□ 1.35
MCF2L2-211ENST00000482017 RABL6Q3YEC7 729 aaPredicted RBP23.47■■□□□ 1.35
MCF2L2-211ENST00000482017 RTL9Q8NET4 1388 aa23.47■■□□□ 1.35
MCF2L2-211ENST00000482017 RPS8P62241 208 aaKnown RBP23.46■■□□□ 1.35
MCF2L2-211ENST00000482017 IGHMBP2P38935 993 aaKnown RBP23.45■■□□□ 1.34
MCF2L2-211ENST00000482017 KLHDC4Q8TBB5 520 aa23.45■■□□□ 1.34
MCF2L2-211ENST00000482017 LRRC37AA6NMS7 1700 aa23.45■■□□□ 1.34
MCF2L2-211ENST00000482017 CCDC88AQ3V6T2 1871 aa23.44■■□□□ 1.34
MCF2L2-211ENST00000482017 DCAF8L1A6NGE4 600 aa23.43■■□□□ 1.34
MCF2L2-211ENST00000482017 SRGAP3O43295 1099 aa23.43■■□□□ 1.34
MCF2L2-211ENST00000482017 BBOX1O75936 387 aa23.43■■□□□ 1.34
MCF2L2-211ENST00000482017 MPHOSPH8Q99549 860 aa23.43■■□□□ 1.34
MCF2L2-211ENST00000482017 CHMP4BQ9H444 224 aaKnown RBP23.43■■□□□ 1.34
MCF2L2-211ENST00000482017 ZBTB40Q9NUA8 1239 aa23.43■■□□□ 1.34
MCF2L2-211ENST00000482017 FER1L6Q2WGJ9 1857 aa23.43■■□□□ 1.34
MCF2L2-211ENST00000482017 ARHGAP27Q6ZUM4 889 aa23.42■■□□□ 1.34
MCF2L2-211ENST00000482017 EXOC6Q8TAG9 804 aa23.42■■□□□ 1.34
MCF2L2-211ENST00000482017 TMX4Q9H1E5 349 aaPredicted RBP23.42■■□□□ 1.34
MCF2L2-211ENST00000482017 A0A1B0GUL6 1792 aa23.42■■□□□ 1.34
MCF2L2-211ENST00000482017 PNMA6EA0A0J9YXQ4 647 aa23.41■■□□□ 1.34
MCF2L2-211ENST00000482017 CCDC93Q567U6 631 aa23.41■■□□□ 1.34
MCF2L2-211ENST00000482017 PA2G4Q9UQ80 394 aaKnown RBP23.41■■□□□ 1.34
MCF2L2-211ENST00000482017 ATP6V0A2Q9Y487 856 aa23.41■■□□□ 1.34
MCF2L2-211ENST00000482017 RASSF7Q02833 373 aa23.4■■□□□ 1.34
MCF2L2-211ENST00000482017 C7orf43Q8WVR3 580 aa23.4■■□□□ 1.34
MCF2L2-211ENST00000482017 PUS3Q9BZE2 481 aaKnown RBP23.4■■□□□ 1.34
MCF2L2-211ENST00000482017 SIL1Q9H173 461 aa23.4■■□□□ 1.34
MCF2L2-211ENST00000482017 CNNM1Q9NRU3 951 aa23.4■■□□□ 1.34
MCF2L2-211ENST00000482017 RFX5P48382 616 aaPredicted RBP23.39■■□□□ 1.33
MCF2L2-211ENST00000482017 CEP85Q6P2H3 762 aa23.39■■□□□ 1.33
MCF2L2-211ENST00000482017 SP8Q8IXZ3 490 aa23.39■■□□□ 1.33
MCF2L2-211ENST00000482017 ATP8B2P98198 1209 aa23.38■■□□□ 1.33
MCF2L2-211ENST00000482017 SOGA3Q5TF21 947 aa23.38■■□□□ 1.33
MCF2L2-211ENST00000482017 LDHAL6AQ6ZMR3 332 aa23.38■■□□□ 1.33
MCF2L2-211ENST00000482017 TMC4Q7Z404 712 aa23.38■■□□□ 1.33
MCF2L2-211ENST00000482017 BSDC1Q9NW68 430 aaPredicted RBP23.38■■□□□ 1.33
MCF2L2-211ENST00000482017 GPSM2P81274 684 aa23.37■■□□□ 1.33
MCF2L2-211ENST00000482017 MTX1Q13505 466 aa23.37■■□□□ 1.33
MCF2L2-211ENST00000482017 LRRC24Q50LG9 513 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms