RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 CEP63Q96MT8 703 aa10.17□□□□□ -0.78
SEC22A-207ENST00000481965 RUBCNLQ9H714 662 aa10.17□□□□□ -0.78
SEC22A-207ENST00000481965 GPAMQ9HCL2 828 aa10.17□□□□□ -0.78
SEC22A-207ENST00000481965 SRA1Q9HD15 236 aaKnown RBP10.17□□□□□ -0.78
SEC22A-207ENST00000481965 VEGFBP49765 207 aa10.16□□□□□ -0.78
SEC22A-207ENST00000481965 NXPE4Q6UWF7 544 aa10.16□□□□□ -0.78
SEC22A-207ENST00000481965 CAPN10Q9HC96 672 aa10.16□□□□□ -0.78
SEC22A-207ENST00000481965 NLRP2Q9NX02 1062 aa10.16□□□□□ -0.78
SEC22A-207ENST00000481965 AVPP01185 164 aa10.15□□□□□ -0.78
SEC22A-207ENST00000481965 USP17L7P0C7H9 530 aa10.15□□□□□ -0.78
SEC22A-207ENST00000481965 BCO2Q9BYV7 579 aa10.15□□□□□ -0.78
SEC22A-207ENST00000481965 THBS1P07996 1170 aa10.14□□□□□ -0.79
SEC22A-207ENST00000481965 EPB42P16452 691 aa10.14□□□□□ -0.79
SEC22A-207ENST00000481965 SAMD5Q5TGI4 173 aa10.14□□□□□ -0.79
SEC22A-207ENST00000481965 NLRP13Q86W25 1043 aa10.14□□□□□ -0.79
SEC22A-207ENST00000481965 BRD7Q9NPI1 651 aa10.14□□□□□ -0.79
SEC22A-207ENST00000481965 ABI2Q9NYB9 513 aaPredicted RBP10.14□□□□□ -0.79
SEC22A-207ENST00000481965 FAM8A1Q9UBU6 413 aa10.14□□□□□ -0.79
SEC22A-207ENST00000481965 DNMT3LQ9UJW3 386 aa10.14□□□□□ -0.79
SEC22A-207ENST00000481965 CYP2E1P05181 493 aaPredicted RBP10.13□□□□□ -0.79
SEC22A-207ENST00000481965 GRM2Q14416 872 aa10.13□□□□□ -0.79
SEC22A-207ENST00000481965 GLIS3Q8NEA6 775 aa10.13□□□□□ -0.79
SEC22A-207ENST00000481965 DYRK1BQ9Y463 629 aa10.13□□□□□ -0.79
SEC22A-207ENST00000481965 SENP3-EIF4A1A0A087X0R7 540 aa10.12□□□□□ -0.79
SEC22A-207ENST00000481965 F11P03951 625 aa10.12□□□□□ -0.79
SEC22A-207ENST00000481965 ST13P50502 369 aaKnown RBP10.12□□□□□ -0.79
SEC22A-207ENST00000481965 TAF1CQ15572 869 aaPredicted RBP10.12□□□□□ -0.79
SEC22A-207ENST00000481965 USP48Q86UV5 1035 aa10.12□□□□□ -0.79
SEC22A-207ENST00000481965 NLRP8Q86W28 1048 aa10.12□□□□□ -0.79
SEC22A-207ENST00000481965 GMLQ99445 158 aa10.12□□□□□ -0.79
SEC22A-207ENST00000481965 TANGO6Q9C0B7 1094 aa10.12□□□□□ -0.79
SEC22A-207ENST00000481965 SUV39H2Q9H5I1 410 aa10.12□□□□□ -0.79
SEC22A-207ENST00000481965 C11orf16Q9NQ32 467 aa10.12□□□□□ -0.79
SEC22A-207ENST00000481965 HCN2Q9UL51 889 aa10.12□□□□□ -0.79
SEC22A-207ENST00000481965 POTECB2RU33 542 aa10.11□□□□□ -0.79
SEC22A-207ENST00000481965 KCNQ4P56696 695 aa10.11□□□□□ -0.79
SEC22A-207ENST00000481965 HS2ST1Q7LGA3 356 aa10.11□□□□□ -0.79
SEC22A-207ENST00000481965 ZNF654Q8IZM8 581 aa10.11□□□□□ -0.79
SEC22A-207ENST00000481965 ZFP42Q96MM3 310 aa10.11□□□□□ -0.79
SEC22A-207ENST00000481965 SRCIN1Q9C0H9 1055 aa10.11□□□□□ -0.79
SEC22A-207ENST00000481965 LATS2Q9NRM7 1088 aa10.11□□□□□ -0.79
SEC22A-207ENST00000481965 PRKAG2Q9UGJ0 569 aa10.11□□□□□ -0.79
SEC22A-207ENST00000481965 GGT7Q9UJ14 662 aa10.11□□□□□ -0.79
SEC22A-207ENST00000481965 PDZRN3Q9UPQ7 1066 aa10.11□□□□□ -0.79
SEC22A-207ENST00000481965 GJA3Q9Y6H8 435 aa10.11□□□□□ -0.79
SEC22A-207ENST00000481965 FAM187AA6NFU0 413 aa10.1□□□□□ -0.79
SEC22A-207ENST00000481965 UBAP2LQ14157 1087 aaKnown RBP10.1□□□□□ -0.79
SEC22A-207ENST00000481965 SCARF1Q14162 830 aa10.1□□□□□ -0.79
SEC22A-207ENST00000481965 PEAR1Q5VY43 1037 aaPredicted RBP10.1□□□□□ -0.79
SEC22A-207ENST00000481965 ERMP1Q7Z2K6 904 aa10.1□□□□□ -0.79
SEC22A-207ENST00000481965 COPRSQ9NQ92 184 aa10.1□□□□□ -0.79
SEC22A-207ENST00000481965 EFSO43281 561 aa10.09□□□□□ -0.79
SEC22A-207ENST00000481965 GADD45BO75293 160 aaPredicted RBP10.09□□□□□ -0.79
SEC22A-207ENST00000481965 SASH3O75995 380 aa10.09□□□□□ -0.79
SEC22A-207ENST00000481965 CES1P23141 567 aa10.09□□□□□ -0.79
SEC22A-207ENST00000481965 SFSWAPQ12872 951 aaKnown RBP10.09□□□□□ -0.79
SEC22A-207ENST00000481965 KIAA0319Q5VV43 1072 aa10.09□□□□□ -0.79
SEC22A-207ENST00000481965 C3orf58Q8NDZ4 430 aa10.09□□□□□ -0.79
SEC22A-207ENST00000481965 GAS2L1Q99501 681 aaPredicted RBP10.09□□□□□ -0.79
SEC22A-207ENST00000481965 KANSL3Q9P2N6 904 aa10.09□□□□□ -0.79
SEC22A-207ENST00000481965 A0A1W2PP55 124 aa10.08□□□□□ -0.8
SEC22A-207ENST00000481965 TARSP26639 723 aaKnown RBP10.08□□□□□ -0.8
SEC22A-207ENST00000481965 SMCPP49901 116 aaPredicted RBP10.08□□□□□ -0.8
SEC22A-207ENST00000481965 GRIN2CQ14957 1233 aa10.08□□□□□ -0.8
SEC22A-207ENST00000481965 FAM177A1Q8N128 213 aaPredicted RBP10.08□□□□□ -0.8
SEC22A-207ENST00000481965 DHX38Q92620 1227 aaKnown RBP10.08□□□□□ -0.8
SEC22A-207ENST00000481965 GSX2Q9BZM3 304 aa10.08□□□□□ -0.8
SEC22A-207ENST00000481965 KCNH4Q9UQ05 1017 aa10.08□□□□□ -0.8
SEC22A-207ENST00000481965 MMP20O60882 483 aa10.07□□□□□ -0.8
SEC22A-207ENST00000481965 FAM157BP0CG42 384 aa10.07□□□□□ -0.8
SEC22A-207ENST00000481965 MAP3K10Q02779 954 aa10.07□□□□□ -0.8
SEC22A-207ENST00000481965 TTC39BQ5VTQ0 682 aaPredicted RBP10.07□□□□□ -0.8
SEC22A-207ENST00000481965 ZFATQ9P243 1243 aa10.07□□□□□ -0.8
SEC22A-207ENST00000481965 INPP5FQ9Y2H2 1132 aa10.07□□□□□ -0.8
SEC22A-207ENST00000481965 DNAJA1P31689 397 aaKnown RBP10.06□□□□□ -0.8
SEC22A-207ENST00000481965 KRT25Q7Z3Z0 450 aa10.06□□□□□ -0.8
SEC22A-207ENST00000481965 PGBD3Q8N328 593 aa10.06□□□□□ -0.8
SEC22A-207ENST00000481965 OR13H1Q8NG92 308 aa10.06□□□□□ -0.8
SEC22A-207ENST00000481965 PMEPA1Q969W9 287 aa10.06□□□□□ -0.8
SEC22A-207ENST00000481965 STRN4Q9NRL3 753 aa10.06□□□□□ -0.8
SEC22A-207ENST00000481965 SALL4Q9UJQ4 1053 aa10.06□□□□□ -0.8
SEC22A-207ENST00000481965 DNAJC2Q99543 621 aaKnown RBP10.05□□□□□ -0.8
SEC22A-207ENST00000481965 GJA8P48165 433 aa10.04□□□□□ -0.8
SEC22A-207ENST00000481965 CCINQ13939 588 aa10.04□□□□□ -0.8
SEC22A-207ENST00000481965 CTC1Q2NKJ3 1217 aa10.04□□□□□ -0.8
SEC22A-207ENST00000481965 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.04□□□□□ -0.8
SEC22A-207ENST00000481965 EFHC2Q5JST6 749 aa10.04□□□□□ -0.8
SEC22A-207ENST00000481965 COL13A1Q5TAT6 717 aaPredicted RBP10.04□□□□□ -0.8
SEC22A-207ENST00000481965 DPH6Q7L8W6 267 aa10.04□□□□□ -0.8
SEC22A-207ENST00000481965 CNTNAP3BQ96NU0 1288 aa10.04□□□□□ -0.8
SEC22A-207ENST00000481965 CNTNAP3Q9BZ76 1288 aa10.04□□□□□ -0.8
SEC22A-207ENST00000481965 DCDC2BA2VCK2 349 aa10.03□□□□□ -0.8
SEC22A-207ENST00000481965 ATXN7O15265 892 aaPredicted RBP10.03□□□□□ -0.8
SEC22A-207ENST00000481965 ACPPP15309 386 aa10.03□□□□□ -0.8
SEC22A-207ENST00000481965 ATP2B1P20020 1258 aa10.03□□□□□ -0.8
SEC22A-207ENST00000481965 GSTT1P30711 240 aa10.03□□□□□ -0.8
SEC22A-207ENST00000481965 TNP2Q05952 138 aa10.03□□□□□ -0.8
SEC22A-207ENST00000481965 GNL2Q13823 731 aaKnown RBP10.03□□□□□ -0.8
SEC22A-207ENST00000481965 LBRQ14739 615 aaKnown RBP10.03□□□□□ -0.8
SEC22A-207ENST00000481965 PRPF40BQ6NWY9 871 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms