RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 HYPKQ9NX55 129 aa24.47■■□□□ 1.51
ABCF3-214ENST00000480562 FAM89AQ96GI7 184 aa24.46■■□□□ 1.51
ABCF3-214ENST00000480562 VPS33BQ9H267 617 aa24.46■■□□□ 1.51
ABCF3-214ENST00000480562 TAF1P21675 1872 aa24.46■■□□□ 1.51
ABCF3-214ENST00000480562 ELL2O00472 640 aaPredicted RBP24.45■■□□□ 1.5
ABCF3-214ENST00000480562 CXCL9Q07325 125 aa24.44■■□□□ 1.5
ABCF3-214ENST00000480562 RTL5Q5HYW3 569 aaPredicted RBP24.44■■□□□ 1.5
ABCF3-214ENST00000480562 IFT57Q9NWB7 429 aa24.44■■□□□ 1.5
ABCF3-214ENST00000480562 ZNRF3Q9ULT6 936 aa24.44■■□□□ 1.5
ABCF3-214ENST00000480562 GNAI1P63096 354 aa24.43■■□□□ 1.5
ABCF3-214ENST00000480562 DDX60Q8IY21 1712 aaKnown RBP24.43■■□□□ 1.5
ABCF3-214ENST00000480562 VEGFBP49765 207 aa24.42■■□□□ 1.5
ABCF3-214ENST00000480562 TNS4Q8IZW8 715 aa24.42■■□□□ 1.5
ABCF3-214ENST00000480562 PHAXQ9H814 394 aaKnown RBP24.42■■□□□ 1.5
ABCF3-214ENST00000480562 CALD1Q05682 793 aaKnown RBP24.41■■□□□ 1.5
ABCF3-214ENST00000480562 FMR1Q06787 632 aaKnown RBP eCLIP24.41■■□□□ 1.5
ABCF3-214ENST00000480562 KIAA2012Q0VF49 1180 aa24.41■■□□□ 1.5
ABCF3-214ENST00000480562 USP50Q70EL3 339 aaPredicted RBP24.41■■□□□ 1.5
ABCF3-214ENST00000480562 RIC3Q7Z5B4 369 aa24.41■■□□□ 1.5
ABCF3-214ENST00000480562 CELF1Q92879 486 aaKnown RBP24.41■■□□□ 1.5
ABCF3-214ENST00000480562 GPRC5DQ9NZD1 345 aa24.41■■□□□ 1.5
ABCF3-214ENST00000480562 GMPSP49915 693 aaPredicted RBP24.4■■□□□ 1.5
ABCF3-214ENST00000480562 SF3B3Q15393 1217 aaKnown RBP24.4■■□□□ 1.5
ABCF3-214ENST00000480562 C8orf58Q8NAV2 365 aa24.4■■□□□ 1.5
ABCF3-214ENST00000480562 IRS4O14654 1257 aaPredicted RBP24.39■■□□□ 1.49
ABCF3-214ENST00000480562 RAD17O75943 681 aa24.39■■□□□ 1.49
ABCF3-214ENST00000480562 GOLGA2Q08379 1002 aa24.39■■□□□ 1.49
ABCF3-214ENST00000480562 TRIM28Q13263 835 aaKnown RBP24.39■■□□□ 1.49
ABCF3-214ENST00000480562 TMC4Q7Z404 712 aa24.39■■□□□ 1.49
ABCF3-214ENST00000480562 CCDC184Q52MB2 194 aa24.38■■□□□ 1.49
ABCF3-214ENST00000480562 CIAPIN1Q6FI81 312 aa24.38■■□□□ 1.49
ABCF3-214ENST00000480562 ADARB2Q9NS39 739 aaKnown RBP24.38■■□□□ 1.49
ABCF3-214ENST00000480562 DUOX1Q9NRD9 1551 aa24.37■■□□□ 1.49
ABCF3-214ENST00000480562 COL4A1P02462 1669 aa24.37■■□□□ 1.49
ABCF3-214ENST00000480562 RASSF10A6NK89 507 aa24.37■■□□□ 1.49
ABCF3-214ENST00000480562 MYD88Q99836 296 aa24.37■■□□□ 1.49
ABCF3-214ENST00000480562 ABT1Q9ULW3 272 aaKnown RBP24.37■■□□□ 1.49
ABCF3-214ENST00000480562 YDJCA8MPS7 323 aa24.36■■□□□ 1.49
ABCF3-214ENST00000480562 TRAF5O00463 557 aa24.36■■□□□ 1.49
ABCF3-214ENST00000480562 CAPN15O75808 1086 aa24.36■■□□□ 1.49
ABCF3-214ENST00000480562 DEFB115Q30KQ5 88 aa24.36■■□□□ 1.49
ABCF3-214ENST00000480562 NSFL1CQ9UNZ2 370 aaKnown RBP24.36■■□□□ 1.49
ABCF3-214ENST00000480562 LRRC37AA6NMS7 1700 aa24.35■■□□□ 1.49
ABCF3-214ENST00000480562 FOXN1O15353 648 aa24.35■■□□□ 1.49
ABCF3-214ENST00000480562 BCL2L13Q9BXK5 485 aa24.35■■□□□ 1.49
ABCF3-214ENST00000480562 GPSM2P81274 684 aa24.34■■□□□ 1.49
ABCF3-214ENST00000480562 TNIP1Q15025 636 aa24.34■■□□□ 1.49
ABCF3-214ENST00000480562 TSPYL6Q8N831 410 aa24.34■■□□□ 1.49
ABCF3-214ENST00000480562 ZBTB38Q8NAP3 1195 aaPredicted RBP24.34■■□□□ 1.49
ABCF3-214ENST00000480562 JARID2Q92833 1246 aaPredicted RBP24.34■■□□□ 1.49
ABCF3-214ENST00000480562 C6orf229H3BNL8 230 aa24.33■■□□□ 1.49
ABCF3-214ENST00000480562 RIMBP2O15034 1052 aa24.33■■□□□ 1.49
ABCF3-214ENST00000480562 POLLQ9UGP5 575 aa24.33■■□□□ 1.49
ABCF3-214ENST00000480562 SHTN1A0MZ66 631 aa24.32■■□□□ 1.48
ABCF3-214ENST00000480562 RPS8P62241 208 aaKnown RBP24.32■■□□□ 1.48
ABCF3-214ENST00000480562 WASHC4Q2M389 1173 aa24.32■■□□□ 1.48
ABCF3-214ENST00000480562 DBNDD1Q9H9R9 158 aa24.32■■□□□ 1.48
ABCF3-214ENST00000480562 SEC31BQ9NQW1 1179 aa24.32■■□□□ 1.48
ABCF3-214ENST00000480562 CCDC30Q5VVM6 783 aa24.31■■□□□ 1.48
ABCF3-214ENST00000480562 CST9Q5W186 159 aa24.31■■□□□ 1.48
ABCF3-214ENST00000480562 TSR2Q969E8 191 aaKnown RBP24.31■■□□□ 1.48
ABCF3-214ENST00000480562 AIDAQ96BJ3 306 aa24.31■■□□□ 1.48
ABCF3-214ENST00000480562 GPR101Q96P66 508 aaPredicted RBP24.31■■□□□ 1.48
ABCF3-214ENST00000480562 WDR33Q9C0J8 1336 aaKnown RBP24.31■■□□□ 1.48
ABCF3-214ENST00000480562 HIRAP54198 1017 aaPredicted RBP24.3■■□□□ 1.48
ABCF3-214ENST00000480562 CCDC191Q8NCU4 936 aa24.3■■□□□ 1.48
ABCF3-214ENST00000480562 TRPM4Q8TD43 1214 aa24.3■■□□□ 1.48
ABCF3-214ENST00000480562 METTL22Q9BUU2 404 aaPredicted RBP24.3■■□□□ 1.48
ABCF3-214ENST00000480562 CWC25Q9NXE8 425 aaPredicted RBP24.3■■□□□ 1.48
ABCF3-214ENST00000480562 CNOT7Q9UIV1 285 aaKnown RBP24.3■■□□□ 1.48
ABCF3-214ENST00000480562 ZBTB12Q9Y330 459 aaPredicted RBP24.3■■□□□ 1.48
ABCF3-214ENST00000480562 CDHR2Q9BYE9 1310 aa24.3■■□□□ 1.48
ABCF3-214ENST00000480562 PCCAP05165 728 aaPredicted RBP24.29■■□□□ 1.48
ABCF3-214ENST00000480562 DOK7Q18PE1 504 aa24.29■■□□□ 1.48
ABCF3-214ENST00000480562 PAXIP1Q6ZW49 1069 aaPredicted RBP24.29■■□□□ 1.48
ABCF3-214ENST00000480562 CCDC85AQ96PX6 553 aaPredicted RBP24.29■■□□□ 1.48
ABCF3-214ENST00000480562 GLIS2Q9BZE0 524 aaPredicted RBP24.29■■□□□ 1.48
ABCF3-214ENST00000480562 WBP1LQ9NX94 342 aa24.29■■□□□ 1.48
ABCF3-214ENST00000480562 PSMD14O00487 310 aa24.28■■□□□ 1.48
ABCF3-214ENST00000480562 DDX58O95786 925 aaKnown RBP24.28■■□□□ 1.48
ABCF3-214ENST00000480562 TBC1D16Q8TBP0 767 aa24.28■■□□□ 1.48
ABCF3-214ENST00000480562 MAP3K2Q9Y2U5 619 aa24.28■■□□□ 1.48
ABCF3-214ENST00000480562 HSP90B1P14625 803 aaKnown RBP24.27■■□□□ 1.48
ABCF3-214ENST00000480562 CTCFP49711 727 aaPredicted RBP24.27■■□□□ 1.48
ABCF3-214ENST00000480562 GRM1Q13255 1194 aa24.27■■□□□ 1.48
ABCF3-214ENST00000480562 MICALL2Q8IY33 904 aa24.27■■□□□ 1.48
ABCF3-214ENST00000480562 KCNQ5Q9NR82 932 aa24.27■■□□□ 1.48
ABCF3-214ENST00000480562 PGAP2Q9UHJ9 254 aa24.27■■□□□ 1.48
ABCF3-214ENST00000480562 TRPM7Q96QT4 1865 aa24.27■■□□□ 1.48
ABCF3-214ENST00000480562 H7C1D1 291 aa24.26■■□□□ 1.47
ABCF3-214ENST00000480562 PDE8AO60658 829 aa24.26■■□□□ 1.47
ABCF3-214ENST00000480562 CCDC152Q4G0S7 254 aa24.26■■□□□ 1.47
ABCF3-214ENST00000480562 CAPNS2Q96L46 248 aa24.26■■□□□ 1.47
ABCF3-214ENST00000480562 EYA3Q99504 573 aa24.26■■□□□ 1.47
ABCF3-214ENST00000480562 CHMP4AQ9BY43 222 aa24.26■■□□□ 1.47
ABCF3-214ENST00000480562 ECE2O60344 883 aa24.25■■□□□ 1.47
ABCF3-214ENST00000480562 CELF2O95319 508 aaKnown RBP24.25■■□□□ 1.47
ABCF3-214ENST00000480562 CYP4F22Q6NT55 531 aa24.25■■□□□ 1.47
ABCF3-214ENST00000480562 WWC1Q8IX03 1113 aa24.25■■□□□ 1.47
ABCF3-214ENST00000480562 PRDM10Q9NQV6 1147 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms