RNA–Protein interactions for RNA: ENST00000479029.1

PHF1-207, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-207ENST00000479029 COL4A5P29400 1685 aa21.5■■□□□ 1.03
PHF1-207ENST00000479029 SF3B3Q15393 1217 aaKnown RBP21.49■■□□□ 1.03
PHF1-207ENST00000479029 CCDC184Q52MB2 194 aa21.49■■□□□ 1.03
PHF1-207ENST00000479029 PHAXQ9H814 394 aaKnown RBP21.49■■□□□ 1.03
PHF1-207ENST00000479029 ZNRF3Q9ULT6 936 aa21.49■■□□□ 1.03
PHF1-207ENST00000479029 RTL5Q5HYW3 569 aaPredicted RBP21.48■■□□□ 1.03
PHF1-207ENST00000479029 CCDC30Q5VVM6 783 aa21.48■■□□□ 1.03
PHF1-207ENST00000479029 CNTROBQ8N137 903 aa21.48■■□□□ 1.03
PHF1-207ENST00000479029 IRS4O14654 1257 aaPredicted RBP21.47■■□□□ 1.03
PHF1-207ENST00000479029 HSP90B1P14625 803 aaKnown RBP21.47■■□□□ 1.03
PHF1-207ENST00000479029 EPS15P42566 896 aa21.47■■□□□ 1.03
PHF1-207ENST00000479029 SCNN1DP51172 638 aa21.47■■□□□ 1.03
PHF1-207ENST00000479029 KIAA2012Q0VF49 1180 aa21.47■■□□□ 1.03
PHF1-207ENST00000479029 MAP1SQ66K74 1059 aaPredicted RBP21.47■■□□□ 1.03
PHF1-207ENST00000479029 MKRN1Q9UHC7 482 aaKnown RBP21.47■■□□□ 1.03
PHF1-207ENST00000479029 TMEM88BA6NKF7 163 aa21.46■■□□□ 1.03
PHF1-207ENST00000479029 DDX58O95786 925 aaKnown RBP21.46■■□□□ 1.03
PHF1-207ENST00000479029 ZBTB38Q8NAP3 1195 aaPredicted RBP21.46■■□□□ 1.03
PHF1-207ENST00000479029 CXCL9Q07325 125 aa21.45■■□□□ 1.02
PHF1-207ENST00000479029 CCDC27Q2M243 656 aa21.45■■□□□ 1.02
PHF1-207ENST00000479029 MYD88Q99836 296 aa21.45■■□□□ 1.02
PHF1-207ENST00000479029 USP50Q70EL3 339 aaPredicted RBP21.44■■□□□ 1.02
PHF1-207ENST00000479029 CCDC191Q8NCU4 936 aa21.44■■□□□ 1.02
PHF1-207ENST00000479029 CELF1Q92879 486 aaKnown RBP21.44■■□□□ 1.02
PHF1-207ENST00000479029 TNIP1Q15025 636 aa21.43■■□□□ 1.02
PHF1-207ENST00000479029 WWC1Q8IX03 1113 aa21.43■■□□□ 1.02
PHF1-207ENST00000479029 TSPYL6Q8N831 410 aa21.43■■□□□ 1.02
PHF1-207ENST00000479029 TSR2Q969E8 191 aaKnown RBP21.43■■□□□ 1.02
PHF1-207ENST00000479029 MRS2Q9HD23 443 aa21.43■■□□□ 1.02
PHF1-207ENST00000479029 GPRC5DQ9NZD1 345 aa21.43■■□□□ 1.02
PHF1-207ENST00000479029 NSFL1CQ9UNZ2 370 aaKnown RBP21.43■■□□□ 1.02
PHF1-207ENST00000479029 ANP32CO43423 234 aa21.42■■□□□ 1.02
PHF1-207ENST00000479029 HSPA1AP0DMV8 641 aaKnown RBP21.42■■□□□ 1.02
PHF1-207ENST00000479029 HSPA1BP0DMV9 641 aaKnown RBP21.42■■□□□ 1.02
PHF1-207ENST00000479029 LAMB2P55268 1798 aa21.42■■□□□ 1.02
PHF1-207ENST00000479029 RPS8P62241 208 aaKnown RBP21.42■■□□□ 1.02
PHF1-207ENST00000479029 CIAPIN1Q6FI81 312 aa21.42■■□□□ 1.02
PHF1-207ENST00000479029 METTL22Q9BUU2 404 aaPredicted RBP21.42■■□□□ 1.02
PHF1-207ENST00000479029 CWC25Q9NXE8 425 aaPredicted RBP21.42■■□□□ 1.02
PHF1-207ENST00000479029 CNTNAP1P78357 1384 aa21.41■■□□□ 1.02
PHF1-207ENST00000479029 ZNF316A6NFI3 1004 aaPredicted RBP21.41■■□□□ 1.02
PHF1-207ENST00000479029 WASHC4Q2M389 1173 aa21.41■■□□□ 1.02
PHF1-207ENST00000479029 STK31Q9BXU1 1019 aa21.41■■□□□ 1.02
PHF1-207ENST00000479029 ADARB2Q9NS39 739 aaKnown RBP21.41■■□□□ 1.02
PHF1-207ENST00000479029 RAD17O75943 681 aa21.4■■□□□ 1.02
PHF1-207ENST00000479029 PCCAP05165 728 aaPredicted RBP21.4■■□□□ 1.02
PHF1-207ENST00000479029 GMPSP49915 693 aaPredicted RBP21.4■■□□□ 1.02
PHF1-207ENST00000479029 NCBP3Q53F19 620 aaKnown RBP21.4■■□□□ 1.02
PHF1-207ENST00000479029 COL13A1Q5TAT6 717 aaPredicted RBP21.4■■□□□ 1.02
PHF1-207ENST00000479029 BCL2L13Q9BXK5 485 aa21.4■■□□□ 1.02
PHF1-207ENST00000479029 MAP3K2Q9Y2U5 619 aa21.4■■□□□ 1.02
PHF1-207ENST00000479029 ADAMTSL1Q8N6G6 1762 aa21.4■■□□□ 1.02
PHF1-207ENST00000479029 C6orf229H3BNL8 230 aa21.39■■□□□ 1.01
PHF1-207ENST00000479029 KSR2Q6VAB6 950 aa21.39■■□□□ 1.01
PHF1-207ENST00000479029 IL16Q14005 1332 aa21.38■■□□□ 1.01
PHF1-207ENST00000479029 GPSM2P81274 684 aa21.38■■□□□ 1.01
PHF1-207ENST00000479029 TWISTNBQ3B726 338 aaPredicted RBP21.38■■□□□ 1.01
PHF1-207ENST00000479029 CCDC152Q4G0S7 254 aa21.38■■□□□ 1.01
PHF1-207ENST00000479029 DDX60Q8IY21 1712 aaKnown RBP21.38■■□□□ 1.01
PHF1-207ENST00000479029 CDHR2Q9BYE9 1310 aa21.37■■□□□ 1.01
PHF1-207ENST00000479029 PI4KAP2A4QPH2 592 aa21.37■■□□□ 1.01
PHF1-207ENST00000479029 PDE8AO60658 829 aa21.37■■□□□ 1.01
PHF1-207ENST00000479029 VEGFBP49765 207 aa21.37■■□□□ 1.01
PHF1-207ENST00000479029 PI4KAP1Q8N8J0 262 aa21.37■■□□□ 1.01
PHF1-207ENST00000479029 JARID2Q92833 1246 aaPredicted RBP21.37■■□□□ 1.01
PHF1-207ENST00000479029 EYA3Q99504 573 aa21.37■■□□□ 1.01
PHF1-207ENST00000479029 SEC31BQ9NQW1 1179 aa21.37■■□□□ 1.01
PHF1-207ENST00000479029 POLLQ9UGP5 575 aa21.37■■□□□ 1.01
PHF1-207ENST00000479029 LTBP1Q14766 1721 aa21.37■■□□□ 1.01
PHF1-207ENST00000479029 TAF1P21675 1872 aa21.37■■□□□ 1.01
PHF1-207ENST00000479029 YDJCA8MPS7 323 aa21.36■■□□□ 1.01
PHF1-207ENST00000479029 RIMBP2O15034 1052 aa21.36■■□□□ 1.01
PHF1-207ENST00000479029 NEXNQ0ZGT2 675 aa21.36■■□□□ 1.01
PHF1-207ENST00000479029 ABT1Q9ULW3 272 aaKnown RBP21.36■■□□□ 1.01
PHF1-207ENST00000479029 RASSF10A6NK89 507 aa21.35■■□□□ 1.01
PHF1-207ENST00000479029 SLC4A2P04920 1241 aa21.35■■□□□ 1.01
PHF1-207ENST00000479029 DEFB115Q30KQ5 88 aa21.35■■□□□ 1.01
PHF1-207ENST00000479029 TBC1D16Q8TBP0 767 aa21.35■■□□□ 1.01
PHF1-207ENST00000479029 H7C1D1 291 aa21.34■■□□□ 1.01
PHF1-207ENST00000479029 DBNDD1Q9H9R9 158 aa21.34■■□□□ 1.01
PHF1-207ENST00000479029 PODXL2Q9NZ53 605 aa21.34■■□□□ 1.01
PHF1-207ENST00000479029 ANKIB1Q9P2G1 1089 aa21.34■■□□□ 1.01
PHF1-207ENST00000479029 CNOT7Q9UIV1 285 aaKnown RBP21.34■■□□□ 1.01
PHF1-207ENST00000479029 DUOX1Q9NRD9 1551 aa21.33■■□□□ 1.01
PHF1-207ENST00000479029 IGKV5-2P06315 115 aa21.33■■□□□ 1.01
PHF1-207ENST00000479029 ZC3H15Q8WU90 426 aaKnown RBP21.33■■□□□ 1.01
PHF1-207ENST00000479029 CCDC85AQ96PX6 553 aaPredicted RBP21.33■■□□□ 1.01
PHF1-207ENST00000479029 ZC3H12CQ9C0D7 883 aaKnown RBP21.33■■□□□ 1.01
PHF1-207ENST00000479029 LRRC37AA6NMS7 1700 aa21.32■■□□□ 1
PHF1-207ENST00000479029 TRAF5O00463 557 aa21.32■■□□□ 1
PHF1-207ENST00000479029 FMR1Q06787 632 aaKnown RBP eCLIP21.32■■□□□ 1
PHF1-207ENST00000479029 DOK7Q18PE1 504 aa21.32■■□□□ 1
PHF1-207ENST00000479029 WDR63Q8IWG1 891 aa21.32■■□□□ 1
PHF1-207ENST00000479029 DPF2Q92785 391 aa21.32■■□□□ 1
PHF1-207ENST00000479029 PGAP2Q9UHJ9 254 aa21.32■■□□□ 1
PHF1-207ENST00000479029 SALL2Q9Y467 1007 aaPredicted RBP21.32■■□□□ 1
PHF1-207ENST00000479029 PSMD14O00487 310 aa21.31■■□□□ 1
PHF1-207ENST00000479029 ECE2O60344 883 aa21.31■■□□□ 1
PHF1-207ENST00000479029 UFL1O94874 794 aa21.31■■□□□ 1
PHF1-207ENST00000479029 G2E3Q7L622 706 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms