RNA–Protein interactions for RNA: ENST00000479002.1

CAD-208, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

TSL 5

Gene CAD, Length 614 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-208ENST00000479002 TNRC6CQ9HCJ0 1690 aaKnown RBP20.28■□□□□ 0.84
CAD-208ENST00000479002 DDX60Q8IY21 1712 aaKnown RBP20.27■□□□□ 0.84
CAD-208ENST00000479002 GNAI2P04899 355 aa20.27■□□□□ 0.84
CAD-208ENST00000479002 NPR1P16066 1061 aa20.27■□□□□ 0.84
CAD-208ENST00000479002 STYK1Q6J9G0 422 aa20.27■□□□□ 0.84
CAD-208ENST00000479002 ANKRD44Q8N8A2 993 aa20.27■□□□□ 0.84
CAD-208ENST00000479002 MASTLQ96GX5 879 aa20.27■□□□□ 0.84
CAD-208ENST00000479002 BICC1Q9H694 974 aaKnown RBP20.27■□□□□ 0.84
CAD-208ENST00000479002 ZBTB40Q9NUA8 1239 aa20.27■□□□□ 0.84
CAD-208ENST00000479002 LRRFIP2Q9Y608 721 aaKnown RBP20.27■□□□□ 0.84
CAD-208ENST00000479002 RTL9Q8NET4 1388 aa20.26■□□□□ 0.83
CAD-208ENST00000479002 CCDC152Q4G0S7 254 aa20.26■□□□□ 0.83
CAD-208ENST00000479002 LMBR1LQ6UX01 489 aa20.26■□□□□ 0.83
CAD-208ENST00000479002 CRBNQ96SW2 442 aa20.26■□□□□ 0.83
CAD-208ENST00000479002 LAMB2P55268 1798 aa20.26■□□□□ 0.83
CAD-208ENST00000479002 RPGRQ92834 1020 aaKnown RBP20.25■□□□□ 0.83
CAD-208ENST00000479002 RBM17Q96I25 401 aaKnown RBP20.25■□□□□ 0.83
CAD-208ENST00000479002 CRAMP1Q96RY5 1269 aa20.25■□□□□ 0.83
CAD-208ENST00000479002 GREM2Q9H772 168 aa20.24■□□□□ 0.83
CAD-208ENST00000479002 KIAA1551Q9HCM1 1747 aa20.24■□□□□ 0.83
CAD-208ENST00000479002 MTX1Q13505 466 aa20.23■□□□□ 0.83
CAD-208ENST00000479002 DDX46Q7L014 1031 aaKnown RBP20.23■□□□□ 0.83
CAD-208ENST00000479002 ZNF622Q969S3 477 aaKnown RBP eCLIP20.23■□□□□ 0.83
CAD-208ENST00000479002 CCDC85AQ96PX6 553 aaPredicted RBP20.23■□□□□ 0.83
CAD-208ENST00000479002 ALDH1B1P30837 517 aa20.22■□□□□ 0.83
CAD-208ENST00000479002 FAM161AQ3B820 660 aa20.22■□□□□ 0.83
CAD-208ENST00000479002 CNKSR1Q969H4 720 aa20.22■□□□□ 0.83
CAD-208ENST00000479002 SEC31BQ9NQW1 1179 aa20.22■□□□□ 0.83
CAD-208ENST00000479002 PIM2Q9P1W9 311 aa20.22■□□□□ 0.83
CAD-208ENST00000479002 GRAPQ13588 217 aa20.21■□□□□ 0.83
CAD-208ENST00000479002 TTLL6Q8N841 843 aa20.21■□□□□ 0.83
CAD-208ENST00000479002 GRAPLQ8TC17 118 aaPredicted RBP20.21■□□□□ 0.83
CAD-208ENST00000479002 C1orf115Q9H7X2 142 aa20.21■□□□□ 0.83
CAD-208ENST00000479002 COL11A2P13942 1736 aaPredicted RBP20.21■□□□□ 0.83
CAD-208ENST00000479002 ITGA6P23229 1130 aa20.2■□□□□ 0.82
CAD-208ENST00000479002 CELF1Q92879 486 aaKnown RBP20.2■□□□□ 0.82
CAD-208ENST00000479002 ANKRD18BA2A2Z9 1011 aa20.19■□□□□ 0.82
CAD-208ENST00000479002 BBOX1O75936 387 aa20.19■□□□□ 0.82
CAD-208ENST00000479002 ATP8B2P98198 1209 aa20.19■□□□□ 0.82
CAD-208ENST00000479002 IFIT5Q13325 482 aaKnown RBP20.19■□□□□ 0.82
CAD-208ENST00000479002 AAMPQ13685 434 aa20.19■□□□□ 0.82
CAD-208ENST00000479002 EXOC6Q8TAG9 804 aa20.19■□□□□ 0.82
CAD-208ENST00000479002 CHMP3Q9Y3E7 222 aa20.19■□□□□ 0.82
CAD-208ENST00000479002 RFX5P48382 616 aaPredicted RBP20.18■□□□□ 0.82
CAD-208ENST00000479002 RPS8P62241 208 aaKnown RBP20.18■□□□□ 0.82
CAD-208ENST00000479002 IRX6P78412 446 aaPredicted RBP20.18■□□□□ 0.82
CAD-208ENST00000479002 CCDC57Q2TAC2 916 aa20.18■□□□□ 0.82
CAD-208ENST00000479002 PRPF40BQ6NWY9 871 aaKnown RBP20.18■□□□□ 0.82
CAD-208ENST00000479002 CEP85Q6P2H3 762 aa20.18■□□□□ 0.82
CAD-208ENST00000479002 CDC5LQ99459 802 aaKnown RBP20.18■□□□□ 0.82
CAD-208ENST00000479002 DLEC1Q9Y238 1755 aa20.17■□□□□ 0.82
CAD-208ENST00000479002 DALRD3Q5D0E6 543 aaKnown RBP20.17■□□□□ 0.82
CAD-208ENST00000479002 RPAP2Q8IXW5 612 aaPredicted RBP20.17■□□□□ 0.82
CAD-208ENST00000479002 C7orf43Q8WVR3 580 aa20.17■□□□□ 0.82
CAD-208ENST00000479002 PNMA6EA0A0J9YXQ4 647 aa20.16■□□□□ 0.82
CAD-208ENST00000479002 SRGAP3O43295 1099 aa20.16■□□□□ 0.82
CAD-208ENST00000479002 POLA2Q14181 598 aa20.16■□□□□ 0.82
CAD-208ENST00000479002 ANKRD18AQ8IVF6 992 aa20.16■□□□□ 0.82
CAD-208ENST00000479002 TMC4Q7Z404 712 aa20.15■□□□□ 0.82
CAD-208ENST00000479002 SSH3Q8TE77 659 aa20.15■□□□□ 0.82
CAD-208ENST00000479002 COL4A1P02462 1669 aa20.15■□□□□ 0.82
CAD-208ENST00000479002 MYH3P11055 1940 aa20.15■□□□□ 0.82
CAD-208ENST00000479002 PPEF1O14829 653 aaPredicted RBP20.14■□□□□ 0.81
CAD-208ENST00000479002 IGHMBP2P38935 993 aaKnown RBP20.14■□□□□ 0.81
CAD-208ENST00000479002 PTPN12Q05209 780 aaKnown RBP20.14■□□□□ 0.81
CAD-208ENST00000479002 SIRT2Q8IXJ6 389 aa20.14■□□□□ 0.81
CAD-208ENST00000479002 SP8Q8IXZ3 490 aa20.14■□□□□ 0.81
CAD-208ENST00000479002 ZNF594Q96JF6 807 aaPredicted RBP20.14■□□□□ 0.81
CAD-208ENST00000479002 BSDC1Q9NW68 430 aaPredicted RBP20.14■□□□□ 0.81
CAD-208ENST00000479002 WWC3Q9ULE0 1092 aa20.14■□□□□ 0.81
CAD-208ENST00000479002 ATP6V0A2Q9Y487 856 aa20.14■□□□□ 0.81
CAD-208ENST00000479002 COPRSQ9NQ92 184 aa20.13■□□□□ 0.81
CAD-208ENST00000479002 BCS1LQ9Y276 419 aa20.13■□□□□ 0.81
CAD-208ENST00000479002 PCDHB15Q9Y5E8 787 aa20.13■□□□□ 0.81
CAD-208ENST00000479002 TAF7LQ5H9L4 462 aa20.12■□□□□ 0.81
CAD-208ENST00000479002 KLHDC4Q8TBB5 520 aa20.12■□□□□ 0.81
CAD-208ENST00000479002 BRCA1P38398 1863 aaKnown RBP20.11■□□□□ 0.81
CAD-208ENST00000479002 C21orf2O43822 256 aa20.11■□□□□ 0.81
CAD-208ENST00000479002 CC2D2BQ6DHV5 1058 aa20.11■□□□□ 0.81
CAD-208ENST00000479002 LDHAL6AQ6ZMR3 332 aa20.11■□□□□ 0.81
CAD-208ENST00000479002 MPHOSPH8Q99549 860 aa20.11■□□□□ 0.81
CAD-208ENST00000479002 FBXO3Q9UK99 471 aa20.11■□□□□ 0.81
CAD-208ENST00000479002 SRCAPQ6ZRS2 3230 aa20.1■□□□□ 0.81
CAD-208ENST00000479002 YBX3P16989 372 aaKnown RBP eCLIP20.1■□□□□ 0.813e-7■□□□□ 9.4
CAD-208ENST00000479002 SLC51AQ86UW1 340 aa20.1■□□□□ 0.81
CAD-208ENST00000479002 PUS3Q9BZE2 481 aaKnown RBP20.1■□□□□ 0.81
CAD-208ENST00000479002 MINPP1Q9UNW1 487 aa20.1■□□□□ 0.81
CAD-208ENST00000479002 PA2G4Q9UQ80 394 aaKnown RBP20.1■□□□□ 0.81
CAD-208ENST00000479002 RIPOR2Q9Y4F9 1068 aa20.1■□□□□ 0.81
CAD-208ENST00000479002 SLX4Q8IY92 1834 aa20.1■□□□□ 0.81
CAD-208ENST00000479002 EYA2O00167 538 aa20.09■□□□□ 0.81
CAD-208ENST00000479002 SOGA3Q5TF21 947 aa20.09■□□□□ 0.81
CAD-208ENST00000479002 OLFM4Q6UX06 510 aa20.09■□□□□ 0.81
CAD-208ENST00000479002 ZNF219Q9P2Y4 722 aaPredicted RBP20.09■□□□□ 0.81
CAD-208ENST00000479002 NOP58Q9Y2X3 529 aaKnown RBP20.09■□□□□ 0.81
CAD-208ENST00000479002 SNED1Q8TER0 1413 aa20.09■□□□□ 0.81
CAD-208ENST00000479002 TAF1P21675 1872 aa20.08■□□□□ 0.81
CAD-208ENST00000479002 HMMRO75330 724 aa20.08■□□□□ 0.81
CAD-208ENST00000479002 CIAO1O76071 339 aa20.08■□□□□ 0.81
CAD-208ENST00000479002 GRIPAP1Q4V328 841 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms