RNA–Protein interactions for RNA: ENST00000478336.5

ARF1-208, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 930 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-208ENST00000478336 SLC4A10Q6U841 1118 aa30.44■■■□□ 2.46
ARF1-208ENST00000478336 GRAPLQ8TC17 118 aaPredicted RBP30.44■■■□□ 2.46
ARF1-208ENST00000478336 TAOK3Q9H2K8 898 aa30.44■■■□□ 2.46
ARF1-208ENST00000478336 CCDC88AQ3V6T2 1871 aa30.44■■■□□ 2.46
ARF1-208ENST00000478336 ALDH1L1O75891 902 aa30.43■■■□□ 2.46
ARF1-208ENST00000478336 CC2D2BQ6DHV5 1058 aa30.43■■■□□ 2.46
ARF1-208ENST00000478336 BBOX1O75936 387 aa30.42■■■□□ 2.46
ARF1-208ENST00000478336 LMNB1P20700 586 aa30.42■■■□□ 2.46
ARF1-208ENST00000478336 SLC51AQ86UW1 340 aa30.42■■■□□ 2.46
ARF1-208ENST00000478336 SRCIN1Q9C0H9 1055 aa30.42■■■□□ 2.46
ARF1-208ENST00000478336 RNF181Q9P0P0 153 aa30.42■■■□□ 2.46
ARF1-208ENST00000478336 RTKN2Q8IZC4 609 aa30.41■■■□□ 2.46
ARF1-208ENST00000478336 ZNF784Q8NCA9 323 aaPredicted RBP30.41■■■□□ 2.46
ARF1-208ENST00000478336 PLA2G12BQ9BX93 195 aa30.41■■■□□ 2.46
ARF1-208ENST00000478336 ATP6V0A2Q9Y487 856 aa30.41■■■□□ 2.46
ARF1-208ENST00000478336 LRRC37AA6NMS7 1700 aa30.4■■■□□ 2.46
ARF1-208ENST00000478336 CTSWP56202 376 aa30.4■■■□□ 2.46
ARF1-208ENST00000478336 CCDC152Q4G0S7 254 aa30.4■■■□□ 2.46
ARF1-208ENST00000478336 FKBP4Q02790 459 aaKnown RBP eCLIP30.39■■■□□ 2.462e-6■□□□□ 9.3
ARF1-208ENST00000478336 CELF1Q92879 486 aaKnown RBP30.39■■■□□ 2.46
ARF1-208ENST00000478336 NOB1Q9ULX3 412 aaKnown RBP30.39■■■□□ 2.46
ARF1-208ENST00000478336 DICER1Q9UPY3 1922 aaKnown RBP30.39■■■□□ 2.46
ARF1-208ENST00000478336 TIAM2Q8IVF5 1701 aa30.39■■■□□ 2.45
ARF1-208ENST00000478336 KIF16BQ96L93 1317 aa30.38■■■□□ 2.45
ARF1-208ENST00000478336 GRM8O00222 908 aa30.37■■■□□ 2.45
ARF1-208ENST00000478336 GRIPAP1Q4V328 841 aa30.37■■■□□ 2.45
ARF1-208ENST00000478336 TMC4Q7Z404 712 aa30.37■■■□□ 2.45
ARF1-208ENST00000478336 TTLL11Q8NHH1 800 aa30.37■■■□□ 2.45
ARF1-208ENST00000478336 SP8Q8IXZ3 490 aa30.36■■■□□ 2.45
ARF1-208ENST00000478336 PSMD1Q99460 953 aa30.36■■■□□ 2.45
ARF1-208ENST00000478336 SEC31BQ9NQW1 1179 aa30.36■■■□□ 2.45
ARF1-208ENST00000478336 RTL9Q8NET4 1388 aa30.36■■■□□ 2.45
ARF1-208ENST00000478336 CCDC85AQ96PX6 553 aaPredicted RBP30.35■■■□□ 2.45
ARF1-208ENST00000478336 API5Q9BZZ5 524 aaKnown RBP30.35■■■□□ 2.45
ARF1-208ENST00000478336 ZC3H4Q9UPT8 1303 aaKnown RBP30.35■■■□□ 2.45
ARF1-208ENST00000478336 BCAR3O75815 825 aa30.33■■■□□ 2.45
ARF1-208ENST00000478336 RPS8P62241 208 aaKnown RBP30.33■■■□□ 2.45
ARF1-208ENST00000478336 ARHGAP45Q92619 1136 aa30.33■■■□□ 2.45
ARF1-208ENST00000478336 C9orf78Q9NZ63 289 aaPredicted RBP30.33■■■□□ 2.45
ARF1-208ENST00000478336 UTYO14607 1347 aa30.32■■■□□ 2.44
ARF1-208ENST00000478336 TMX4Q9H1E5 349 aaPredicted RBP30.32■■■□□ 2.44
ARF1-208ENST00000478336 GREM2Q9H772 168 aa30.32■■■□□ 2.44
ARF1-208ENST00000478336 ZNF277Q9NRM2 450 aaPredicted RBP30.32■■■□□ 2.44
ARF1-208ENST00000478336 CSF1RP07333 972 aa30.31■■■□□ 2.44
ARF1-208ENST00000478336 DUOX1Q9NRD9 1551 aa30.3■■■□□ 2.44
ARF1-208ENST00000478336 FOXO4P98177 505 aa30.3■■■□□ 2.44
ARF1-208ENST00000478336 NBPF7P0C2Y1 421 aaPredicted RBP30.29■■■□□ 2.44
ARF1-208ENST00000478336 LTBP1Q14766 1721 aa30.29■■■□□ 2.44
ARF1-208ENST00000478336 IARSP41252 1262 aaKnown RBP30.28■■■□□ 2.44
ARF1-208ENST00000478336 CCT4P50991 539 aaKnown RBP30.28■■■□□ 2.44
ARF1-208ENST00000478336 FAM161AQ3B820 660 aa30.28■■■□□ 2.44
ARF1-208ENST00000478336 CDC5LQ99459 802 aaKnown RBP30.28■■■□□ 2.44
ARF1-208ENST00000478336 RTFDC1Q9BY42 306 aaPredicted RBP30.28■■■□□ 2.44
ARF1-208ENST00000478336 EPHA10Q5JZY3 1008 aa30.27■■■□□ 2.44
ARF1-208ENST00000478336 MPNDQ8N594 471 aa30.27■■■□□ 2.44
ARF1-208ENST00000478336 IPO8O15397 1037 aaKnown RBP30.26■■■□□ 2.43
ARF1-208ENST00000478336 DPP8Q6V1X1 898 aaPredicted RBP30.26■■■□□ 2.43
ARF1-208ENST00000478336 ANKRD18AQ8IVF6 992 aa30.26■■■□□ 2.43
ARF1-208ENST00000478336 USP44Q9H0E7 712 aa30.26■■■□□ 2.43
ARF1-208ENST00000478336 SPEF2Q9C093 1822 aa30.26■■■□□ 2.43
ARF1-208ENST00000478336 ZNF526Q8TF50 670 aaPredicted RBP30.25■■■□□ 2.43
ARF1-208ENST00000478336 KAZALD1Q96I82 304 aa30.25■■■□□ 2.43
ARF1-208ENST00000478336 SUCLG2Q96I99 432 aa30.25■■■□□ 2.43
ARF1-208ENST00000478336 COL4A5P29400 1685 aa30.25■■■□□ 2.43
ARF1-208ENST00000478336 TRIM27P14373 513 aa30.24■■■□□ 2.43
ARF1-208ENST00000478336 ITGA6P23229 1130 aa30.24■■■□□ 2.43
ARF1-208ENST00000478336 ATF7IPQ6VMQ6 1270 aa30.24■■■□□ 2.43
ARF1-208ENST00000478336 FRAT1Q92837 279 aaPredicted RBP30.24■■■□□ 2.43
ARF1-208ENST00000478336 SUPT20HQ8NEM7 779 aa30.23■■■□□ 2.43
ARF1-208ENST00000478336 GPBP1L1Q9HC44 474 aaPredicted RBP30.23■■■□□ 2.43
ARF1-208ENST00000478336 GPSM2P81274 684 aa30.22■■■□□ 2.43
ARF1-208ENST00000478336 LMBR1LQ6UX01 489 aa30.22■■■□□ 2.43
ARF1-208ENST00000478336 INTS3Q68E01 1043 aaKnown RBP30.21■■■□□ 2.43
ARF1-208ENST00000478336 VPS33BQ9H267 617 aa30.21■■■□□ 2.43
ARF1-208ENST00000478336 BSDC1Q9NW68 430 aaPredicted RBP30.21■■■□□ 2.43
ARF1-208ENST00000478336 NSFL1CQ9UNZ2 370 aaKnown RBP30.21■■■□□ 2.43
ARF1-208ENST00000478336 TNNQ9UQP3 1299 aa30.21■■■□□ 2.43
ARF1-208ENST00000478336 ZKSCAN2Q63HK3 967 aa30.2■■■□□ 2.43
ARF1-208ENST00000478336 PODXL2Q9NZ53 605 aa30.2■■■□□ 2.43
ARF1-208ENST00000478336 ANKRD18BA2A2Z9 1011 aa30.19■■■□□ 2.42
ARF1-208ENST00000478336 GLTPD2A6NH11 291 aa30.19■■■□□ 2.42
ARF1-208ENST00000478336 RABL6Q3YEC7 729 aaPredicted RBP30.19■■■□□ 2.42
ARF1-208ENST00000478336 LARGE2Q8N3Y3 721 aa30.19■■■□□ 2.42
ARF1-208ENST00000478336 KDM2BQ8NHM5 1336 aa30.19■■■□□ 2.42
ARF1-208ENST00000478336 PPIP5K2O43314 1243 aa30.18■■■□□ 2.42
ARF1-208ENST00000478336 IGHMBP2P38935 993 aaKnown RBP30.18■■■□□ 2.42
ARF1-208ENST00000478336 IFIT5Q13325 482 aaKnown RBP30.18■■■□□ 2.42
ARF1-208ENST00000478336 AOC3Q16853 763 aa30.18■■■□□ 2.42
ARF1-208ENST00000478336 BICC1Q9H694 974 aaKnown RBP30.18■■■□□ 2.42
ARF1-208ENST00000478336 CHMP3Q9Y3E7 222 aa30.18■■■□□ 2.42
ARF1-208ENST00000478336 FZD9O00144 591 aa30.17■■■□□ 2.42
ARF1-208ENST00000478336 KIAA2012Q0VF49 1180 aa30.17■■■□□ 2.42
ARF1-208ENST00000478336 ANKRD44Q8N8A2 993 aa30.17■■■□□ 2.42
ARF1-208ENST00000478336 JDP2Q8WYK2 163 aa30.17■■■□□ 2.42
ARF1-208ENST00000478336 POLLQ9UGP5 575 aa30.17■■■□□ 2.42
ARF1-208ENST00000478336 TBC1D16Q8TBP0 767 aa30.16■■■□□ 2.42
ARF1-208ENST00000478336 MINPP1Q9UNW1 487 aa30.15■■■□□ 2.42
ARF1-208ENST00000478336 XDHP47989 1333 aa30.15■■■□□ 2.42
ARF1-208ENST00000478336 ZNF541Q9H0D2 1346 aa30.15■■■□□ 2.42
ARF1-208ENST00000478336 WDR90Q96KV7 1748 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms