RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 BBOX1O75936 387 aa15.17■□□□□ 0.02
VARS2-208ENST00000477052 CXCL9Q07325 125 aa15.17■□□□□ 0.02
VARS2-208ENST00000477052 GRAPQ13588 217 aa15.17■□□□□ 0.02
VARS2-208ENST00000477052 SP8Q8IXZ3 490 aa15.17■□□□□ 0.02
VARS2-208ENST00000477052 MPNDQ8N594 471 aa15.17■□□□□ 0.02
VARS2-208ENST00000477052 GRAPLQ8TC17 118 aaPredicted RBP15.17■□□□□ 0.02
VARS2-208ENST00000477052 JARID2Q92833 1246 aaPredicted RBP15.17■□□□□ 0.02
VARS2-208ENST00000477052 ISCA1Q9BUE6 129 aa15.17■□□□□ 0.02
VARS2-208ENST00000477052 DBF4Q9UBU7 674 aaPredicted RBP15.17■□□□□ 0.02
VARS2-208ENST00000477052 SHTN1A0MZ66 631 aa15.16■□□□□ 0.02
VARS2-208ENST00000477052 RAD17O75943 681 aa15.16■□□□□ 0.02
VARS2-208ENST00000477052 ZNF853P0CG23 659 aa15.16■□□□□ 0.02
VARS2-208ENST00000477052 GRIPAP1Q4V328 841 aa15.16■□□□□ 0.02
VARS2-208ENST00000477052 CELF1Q92879 486 aaKnown RBP15.16■□□□□ 0.02
VARS2-208ENST00000477052 RTFDC1Q9BY42 306 aaPredicted RBP15.16■□□□□ 0.02
VARS2-208ENST00000477052 ZNRF3Q9ULT6 936 aa15.16■□□□□ 0.02
VARS2-208ENST00000477052 DDX60Q8IY21 1712 aaKnown RBP15.16■□□□□ 0.02
VARS2-208ENST00000477052 FOXN1O15353 648 aa15.15■□□□□ 0.02
VARS2-208ENST00000477052 GMPSP49915 693 aaPredicted RBP15.15■□□□□ 0.02
VARS2-208ENST00000477052 C8orf58Q8NAV2 365 aa15.15■□□□□ 0.02
VARS2-208ENST00000477052 GPR101Q96P66 508 aaPredicted RBP15.15■□□□□ 0.02
VARS2-208ENST00000477052 HYPKQ9NX55 129 aa15.15■□□□□ 0.02
VARS2-208ENST00000477052 ABT1Q9ULW3 272 aaKnown RBP15.15■□□□□ 0.02
VARS2-208ENST00000477052 HOXB7P09629 217 aa15.14■□□□□ 0.01
VARS2-208ENST00000477052 RIC3Q7Z5B4 369 aa15.14■□□□□ 0.01
VARS2-208ENST00000477052 GPRC5DQ9NZD1 345 aa15.14■□□□□ 0.01
VARS2-208ENST00000477052 YDJCA8MPS7 323 aa15.13■□□□□ 0.01
VARS2-208ENST00000477052 RIMBP2O15034 1052 aa15.13■□□□□ 0.01
VARS2-208ENST00000477052 KIAA2012Q0VF49 1180 aa15.13■□□□□ 0.01
VARS2-208ENST00000477052 GRM1Q13255 1194 aa15.13■□□□□ 0.01
VARS2-208ENST00000477052 SUPT20HQ8NEM7 779 aa15.13■□□□□ 0.01
VARS2-208ENST00000477052 MYD88Q99836 296 aa15.13■□□□□ 0.01
VARS2-208ENST00000477052 DUOX1Q9NRD9 1551 aa15.13■□□□□ 0.01
VARS2-208ENST00000477052 IFT57Q9NWB7 429 aa15.13■□□□□ 0.01
VARS2-208ENST00000477052 IRS4O14654 1257 aaPredicted RBP15.12■□□□□ 0.01
VARS2-208ENST00000477052 GPSM2P81274 684 aa15.12■□□□□ 0.01
VARS2-208ENST00000477052 DEFB115Q30KQ5 88 aa15.12■□□□□ 0.01
VARS2-208ENST00000477052 CIAPIN1Q6FI81 312 aa15.12■□□□□ 0.01
VARS2-208ENST00000477052 TSPYL6Q8N831 410 aa15.12■□□□□ 0.01
VARS2-208ENST00000477052 TSR2Q969E8 191 aaKnown RBP15.12■□□□□ 0.01
VARS2-208ENST00000477052 CCDC85AQ96PX6 553 aaPredicted RBP15.12■□□□□ 0.01
VARS2-208ENST00000477052 SEC31BQ9NQW1 1179 aa15.12■□□□□ 0.01
VARS2-208ENST00000477052 KCNQ5Q9NR82 932 aa15.12■□□□□ 0.01
VARS2-208ENST00000477052 NSFL1CQ9UNZ2 370 aaKnown RBP15.12■□□□□ 0.01
VARS2-208ENST00000477052 ZBTB12Q9Y330 459 aaPredicted RBP15.12■□□□□ 0.01
VARS2-208ENST00000477052 HIRAP54198 1017 aaPredicted RBP15.11■□□□□ 0.01
VARS2-208ENST00000477052 GNAI1P63096 354 aa15.11■□□□□ 0.01
VARS2-208ENST00000477052 GOLGA2Q08379 1002 aa15.11■□□□□ 0.01
VARS2-208ENST00000477052 SF3B3Q15393 1217 aaKnown RBP15.11■□□□□ 0.01
VARS2-208ENST00000477052 DOK7Q18PE1 504 aa15.11■□□□□ 0.01
VARS2-208ENST00000477052 CST9Q5W186 159 aa15.11■□□□□ 0.01
VARS2-208ENST00000477052 DLK2Q6UY11 383 aa15.11■□□□□ 0.01
VARS2-208ENST00000477052 PAXIP1Q6ZW49 1069 aaPredicted RBP15.11■□□□□ 0.01
VARS2-208ENST00000477052 USP50Q70EL3 339 aaPredicted RBP15.11■□□□□ 0.01
VARS2-208ENST00000477052 TRPM4Q8TD43 1214 aa15.11■□□□□ 0.01
VARS2-208ENST00000477052 BCL2L13Q9BXK5 485 aa15.11■□□□□ 0.01
VARS2-208ENST00000477052 GLIS2Q9BZE0 524 aaPredicted RBP15.11■□□□□ 0.01
VARS2-208ENST00000477052 DBNDD1Q9H9R9 158 aa15.11■□□□□ 0.01
VARS2-208ENST00000477052 ADARB2Q9NS39 739 aaKnown RBP15.11■□□□□ 0.01
VARS2-208ENST00000477052 POLLQ9UGP5 575 aa15.11■□□□□ 0.01
VARS2-208ENST00000477052 RASSF10A6NK89 507 aa15.1■□□□□ 0.01
VARS2-208ENST00000477052 C6orf229H3BNL8 230 aa15.1■□□□□ 0.01
VARS2-208ENST00000477052 VPS33BQ9H267 617 aa15.1■□□□□ 0.01
VARS2-208ENST00000477052 WASHC4Q2M389 1173 aa15.09■□□□□ 0.01
VARS2-208ENST00000477052 CYP4F22Q6NT55 531 aa15.09■□□□□ 0.01
VARS2-208ENST00000477052 WDR33Q9C0J8 1336 aaKnown RBP15.09■□□□□ 0.01
VARS2-208ENST00000477052 LRRC37AA6NMS7 1700 aa15.09■□□□□ 0.01
VARS2-208ENST00000477052 PSMD14O00487 310 aa15.08■□□□□ 0
VARS2-208ENST00000477052 RPS8P62241 208 aaKnown RBP15.08■□□□□ 0
VARS2-208ENST00000477052 TRIM28Q13263 835 aaKnown RBP15.08■□□□□ 0
VARS2-208ENST00000477052 TNIP1Q15025 636 aa15.08■□□□□ 0
VARS2-208ENST00000477052 ZBTB38Q8NAP3 1195 aaPredicted RBP15.08■□□□□ 0
VARS2-208ENST00000477052 AIDAQ96BJ3 306 aa15.08■□□□□ 0
VARS2-208ENST00000477052 ZNF408Q9H9D4 720 aa15.08■□□□□ 0
VARS2-208ENST00000477052 WBP1LQ9NX94 342 aa15.08■□□□□ 0
VARS2-208ENST00000477052 CNOT7Q9UIV1 285 aaKnown RBP15.08■□□□□ 0
VARS2-208ENST00000477052 EGFRP00533 1210 aa15.07■□□□□ 0
VARS2-208ENST00000477052 LBX1P52954 281 aa15.07■□□□□ 0
VARS2-208ENST00000477052 SAMD7Q7Z3H4 446 aa15.07■□□□□ 0
VARS2-208ENST00000477052 MICALL2Q8IY33 904 aa15.07■□□□□ 0
VARS2-208ENST00000477052 WTIPA6NIX2 430 aaPredicted RBP15.06■□□□□ 0
VARS2-208ENST00000477052 ECE2O60344 883 aa15.06■□□□□ 0
VARS2-208ENST00000477052 AOC2O75106 756 aa15.06■□□□□ 0
VARS2-208ENST00000477052 CELF2O95319 508 aaKnown RBP15.06■□□□□ 0
VARS2-208ENST00000477052 CALD1Q05682 793 aaKnown RBP15.06■□□□□ 0
VARS2-208ENST00000477052 TBC1D10BQ4KMP7 808 aaPredicted RBP15.06■□□□□ 0
VARS2-208ENST00000477052 RBM26Q5T8P6 1007 aaKnown RBP15.06■□□□□ 0
VARS2-208ENST00000477052 TMC4Q7Z404 712 aa15.06■□□□□ 0
VARS2-208ENST00000477052 TBC1D16Q8TBP0 767 aa15.06■□□□□ 0
VARS2-208ENST00000477052 CAPNS2Q96L46 248 aa15.06■□□□□ 0
VARS2-208ENST00000477052 MAP3K2Q9Y2U5 619 aa15.06■□□□□ 0
VARS2-208ENST00000477052 SALL2Q9Y467 1007 aaPredicted RBP15.06■□□□□ 0
VARS2-208ENST00000477052 CTCFP49711 727 aaPredicted RBP15.05■□□□□ -0
VARS2-208ENST00000477052 CCDC30Q5VVM6 783 aa15.05■□□□□ -0
VARS2-208ENST00000477052 G2E3Q7L622 706 aa15.05■□□□□ -0
VARS2-208ENST00000477052 USP48Q86UV5 1035 aa15.05■□□□□ -0
VARS2-208ENST00000477052 METTL22Q9BUU2 404 aaPredicted RBP15.05■□□□□ -0
VARS2-208ENST00000477052 CWC25Q9NXE8 425 aaPredicted RBP15.05■□□□□ -0
VARS2-208ENST00000477052 RTL9Q8NET4 1388 aa15.05■□□□□ -0
VARS2-208ENST00000477052 TRPM7Q96QT4 1865 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms