RNA–Protein interactions for RNA: ENST00000475819.1

LMNB2-202, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-202ENST00000475819 HOXB7P09629 217 aa21.54■■□□□ 1.04
LMNB2-202ENST00000475819 DEFB115Q30KQ5 88 aa21.54■■□□□ 1.04
LMNB2-202ENST00000475819 PARP10Q53GL7 1025 aa21.54■■□□□ 1.04
LMNB2-202ENST00000475819 GIGYF2Q6Y7W6 1299 aaKnown RBP21.54■■□□□ 1.04
LMNB2-202ENST00000475819 HOXA10P31260 410 aaPredicted RBP21.53■■□□□ 1.04
LMNB2-202ENST00000475819 SLC51AQ86UW1 340 aa21.53■■□□□ 1.04
LMNB2-202ENST00000475819 NLRP3Q96P20 1036 aa21.53■■□□□ 1.04
LMNB2-202ENST00000475819 CRAMP1Q96RY5 1269 aa21.53■■□□□ 1.04
LMNB2-202ENST00000475819 PRDM10Q9NQV6 1147 aa21.53■■□□□ 1.04
LMNB2-202ENST00000475819 RASSF10A6NK89 507 aa21.52■■□□□ 1.04
LMNB2-202ENST00000475819 AOC3Q16853 763 aa21.52■■□□□ 1.04
LMNB2-202ENST00000475819 ALDH1L2Q3SY69 923 aa21.52■■□□□ 1.04
LMNB2-202ENST00000475819 ZNF34Q8IZ26 560 aa21.52■■□□□ 1.04
LMNB2-202ENST00000475819 C8orf58Q8NAV2 365 aa21.52■■□□□ 1.04
LMNB2-202ENST00000475819 UTP14AQ9BVJ6 771 aaKnown RBP21.52■■□□□ 1.04
LMNB2-202ENST00000475819 VAMP4O75379 141 aa21.51■■□□□ 1.03
LMNB2-202ENST00000475819 SCNN1DP51172 638 aa21.51■■□□□ 1.03
LMNB2-202ENST00000475819 LBX1P52954 281 aa21.51■■□□□ 1.03
LMNB2-202ENST00000475819 C3orf67Q6ZVT6 689 aa21.51■■□□□ 1.03
LMNB2-202ENST00000475819 NECTIN2Q92692 538 aa21.51■■□□□ 1.03
LMNB2-202ENST00000475819 DDX21Q9NR30 783 aaKnown RBP eCLIP21.51■■□□□ 1.03
LMNB2-202ENST00000475819 LAMB2P55268 1798 aa21.51■■□□□ 1.03
LMNB2-202ENST00000475819 TRPM7Q96QT4 1865 aa21.5■■□□□ 1.03
LMNB2-202ENST00000475819 ANXA1P04083 346 aa21.5■■□□□ 1.03
LMNB2-202ENST00000475819 EPS15P42566 896 aa21.5■■□□□ 1.03
LMNB2-202ENST00000475819 RARSP54136 660 aaKnown RBP21.5■■□□□ 1.03
LMNB2-202ENST00000475819 TSPYL6Q8N831 410 aa21.5■■□□□ 1.03
LMNB2-202ENST00000475819 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.5■■□□□ 1.03
LMNB2-202ENST00000475819 ABCC4O15439 1325 aa21.5■■□□□ 1.03
LMNB2-202ENST00000475819 WDR33Q9C0J8 1336 aaKnown RBP21.5■■□□□ 1.03
LMNB2-202ENST00000475819 MAP2K1Q02750 393 aaPredicted RBP21.49■■□□□ 1.03
LMNB2-202ENST00000475819 AIMP1Q12904 312 aaKnown RBP21.49■■□□□ 1.03
LMNB2-202ENST00000475819 WBP1LQ9NX94 342 aa21.49■■□□□ 1.03
LMNB2-202ENST00000475819 SUPT16HQ9Y5B9 1047 aaKnown RBP21.49■■□□□ 1.03
LMNB2-202ENST00000475819 ELL2O00472 640 aaPredicted RBP21.48■■□□□ 1.03
LMNB2-202ENST00000475819 USP50Q70EL3 339 aaPredicted RBP21.48■■□□□ 1.03
LMNB2-202ENST00000475819 SUPT20HQ8NEM7 779 aa21.48■■□□□ 1.03
LMNB2-202ENST00000475819 BEGAINQ9BUH8 593 aa21.48■■□□□ 1.03
LMNB2-202ENST00000475819 KRT24Q2M2I5 525 aa21.47■■□□□ 1.03
LMNB2-202ENST00000475819 PROSER3Q2NL68 480 aa21.47■■□□□ 1.03
LMNB2-202ENST00000475819 HSP90AB3PQ58FF7 597 aa21.47■■□□□ 1.03
LMNB2-202ENST00000475819 DPP8Q6V1X1 898 aaPredicted RBP21.47■■□□□ 1.03
LMNB2-202ENST00000475819 ATP6V0A2Q9Y487 856 aa21.47■■□□□ 1.03
LMNB2-202ENST00000475819 TRAF5O00463 557 aa21.46■■□□□ 1.03
LMNB2-202ENST00000475819 ECE1P42892 770 aa21.46■■□□□ 1.03
LMNB2-202ENST00000475819 FMR1Q06787 632 aaKnown RBP eCLIP21.46■■□□□ 1.03
LMNB2-202ENST00000475819 SMC4Q9NTJ3 1288 aa21.46■■□□□ 1.03
LMNB2-202ENST00000475819 THSD7BQ9C0I4 1608 aa21.46■■□□□ 1.03
LMNB2-202ENST00000475819 KIF16BQ96L93 1317 aa21.46■■□□□ 1.03
LMNB2-202ENST00000475819 RRP1P56182 461 aaKnown RBP21.45■■□□□ 1.02
LMNB2-202ENST00000475819 CCDC30Q5VVM6 783 aa21.45■■□□□ 1.02
LMNB2-202ENST00000475819 CAPNS2Q96L46 248 aa21.45■■□□□ 1.02
LMNB2-202ENST00000475819 ADARB2Q9NS39 739 aaKnown RBP21.45■■□□□ 1.02
LMNB2-202ENST00000475819 HSPA8P11142 646 aaKnown RBP21.44■■□□□ 1.02
LMNB2-202ENST00000475819 HCLS1P14317 486 aaPredicted RBP21.44■■□□□ 1.02
LMNB2-202ENST00000475819 BRPF1P55201 1214 aaPredicted RBP21.44■■□□□ 1.02
LMNB2-202ENST00000475819 DDX46Q7L014 1031 aaKnown RBP21.44■■□□□ 1.02
LMNB2-202ENST00000475819 SSH1Q8WYL5 1049 aa21.44■■□□□ 1.02
LMNB2-202ENST00000475819 BCL2L13Q9BXK5 485 aa21.44■■□□□ 1.02
LMNB2-202ENST00000475819 GPRC5DQ9NZD1 345 aa21.44■■□□□ 1.02
LMNB2-202ENST00000475819 TRMT112Q9UI30 125 aaKnown RBP21.44■■□□□ 1.02
LMNB2-202ENST00000475819 ZNRF3Q9ULT6 936 aa21.44■■□□□ 1.02
LMNB2-202ENST00000475819 NEFLP07196 543 aa21.43■■□□□ 1.02
LMNB2-202ENST00000475819 PDIA6Q15084 440 aa21.43■■□□□ 1.02
LMNB2-202ENST00000475819 HDGFL1Q5TGJ6 251 aa21.43■■□□□ 1.02
LMNB2-202ENST00000475819 CYP4F22Q6NT55 531 aa21.43■■□□□ 1.02
LMNB2-202ENST00000475819 COPS6Q7L5N1 327 aa21.43■■□□□ 1.02
LMNB2-202ENST00000475819 MPNDQ8N594 471 aa21.43■■□□□ 1.02
LMNB2-202ENST00000475819 XAGE3Q8WTP9 111 aa21.43■■□□□ 1.02
LMNB2-202ENST00000475819 STK31Q9BXU1 1019 aa21.43■■□□□ 1.02
LMNB2-202ENST00000475819 BCAR3O75815 825 aa21.42■■□□□ 1.02
LMNB2-202ENST00000475819 GMPSP49915 693 aaPredicted RBP21.42■■□□□ 1.02
LMNB2-202ENST00000475819 LRP10Q7Z4F1 713 aa21.42■■□□□ 1.02
LMNB2-202ENST00000475819 NLRP10Q86W26 655 aa21.42■■□□□ 1.02
LMNB2-202ENST00000475819 SH3TC1Q8TE82 1336 aa21.42■■□□□ 1.02
LMNB2-202ENST00000475819 VPS33BQ9H267 617 aa21.42■■□□□ 1.02
LMNB2-202ENST00000475819 ZNF408Q9H9D4 720 aa21.42■■□□□ 1.02
LMNB2-202ENST00000475819 CXCL9Q07325 125 aa21.41■■□□□ 1.02
LMNB2-202ENST00000475819 CIAPIN1Q6FI81 312 aa21.41■■□□□ 1.02
LMNB2-202ENST00000475819 BBOX1O75936 387 aa21.4■■□□□ 1.02
LMNB2-202ENST00000475819 RAD17O75943 681 aa21.4■■□□□ 1.02
LMNB2-202ENST00000475819 CELF2O95319 508 aaKnown RBP21.4■■□□□ 1.02
LMNB2-202ENST00000475819 GRAPQ13588 217 aa21.4■■□□□ 1.02
LMNB2-202ENST00000475819 SLC10A5Q5PT55 438 aa21.4■■□□□ 1.02
LMNB2-202ENST00000475819 GRAPLQ8TC17 118 aaPredicted RBP21.4■■□□□ 1.02
LMNB2-202ENST00000475819 GPR101Q96P66 508 aaPredicted RBP21.4■■□□□ 1.02
LMNB2-202ENST00000475819 TAF1P21675 1872 aa21.4■■□□□ 1.02
LMNB2-202ENST00000475819 CDHR2Q9BYE9 1310 aa21.39■■□□□ 1.01
LMNB2-202ENST00000475819 SP8Q8IXZ3 490 aa21.39■■□□□ 1.01
LMNB2-202ENST00000475819 MRPL50Q8N5N7 158 aaKnown RBP21.39■■□□□ 1.01
LMNB2-202ENST00000475819 TLL2Q9Y6L7 1015 aa21.39■■□□□ 1.01
LMNB2-202ENST00000475819 LRRC37AA6NMS7 1700 aa21.38■■□□□ 1.01
LMNB2-202ENST00000475819 DDX60Q8IY21 1712 aaKnown RBP21.38■■□□□ 1.01
LMNB2-202ENST00000475819 IPO8O15397 1037 aaKnown RBP21.38■■□□□ 1.01
LMNB2-202ENST00000475819 MS4A1P11836 297 aa21.38■■□□□ 1.01
LMNB2-202ENST00000475819 KIAA2012Q0VF49 1180 aa21.38■■□□□ 1.01
LMNB2-202ENST00000475819 TNIP1Q15025 636 aa21.38■■□□□ 1.01
LMNB2-202ENST00000475819 RTFDC1Q9BY42 306 aaPredicted RBP21.38■■□□□ 1.01
LMNB2-202ENST00000475819 GLIS2Q9BZE0 524 aaPredicted RBP21.38■■□□□ 1.01
LMNB2-202ENST00000475819 CHPF2Q9P2E5 772 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms