RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 FZD9O00144 591 aa9.22□□□□□ -0.93
LSAMP-203ENST00000474851 DDNO94850 711 aaPredicted RBP9.22□□□□□ -0.93
LSAMP-203ENST00000474851 PCCAP05165 728 aaPredicted RBP9.22□□□□□ -0.93
LSAMP-203ENST00000474851 VEGFAP15692 232 aaPredicted RBP9.22□□□□□ -0.93
LSAMP-203ENST00000474851 IARSP41252 1262 aaKnown RBP9.22□□□□□ -0.93
LSAMP-203ENST00000474851 FXR2P51116 673 aaKnown RBP eCLIP9.22□□□□□ -0.93
LSAMP-203ENST00000474851 FLIIQ13045 1269 aa9.22□□□□□ -0.93
LSAMP-203ENST00000474851 GRAPQ13588 217 aa9.22□□□□□ -0.93
LSAMP-203ENST00000474851 DDX46Q7L014 1031 aaKnown RBP9.22□□□□□ -0.93
LSAMP-203ENST00000474851 RBM46Q8TBY0 533 aaKnown RBP9.22□□□□□ -0.93
LSAMP-203ENST00000474851 GRAPLQ8TC17 118 aaPredicted RBP9.22□□□□□ -0.93
LSAMP-203ENST00000474851 CELF1Q92879 486 aaKnown RBP9.22□□□□□ -0.93
LSAMP-203ENST00000474851 STK31Q9BXU1 1019 aa9.22□□□□□ -0.93
LSAMP-203ENST00000474851 RTFDC1Q9BY42 306 aaPredicted RBP9.22□□□□□ -0.93
LSAMP-203ENST00000474851 MYH16Q9H6N6 1097 aa9.22□□□□□ -0.93
LSAMP-203ENST00000474851 CWC25Q9NXE8 425 aaPredicted RBP9.22□□□□□ -0.93
LSAMP-203ENST00000474851 AFDNP55196 1824 aaKnown RBP9.21□□□□□ -0.93
LSAMP-203ENST00000474851 VIRMAQ69YN4 1812 aaKnown RBP9.21□□□□□ -0.93
LSAMP-203ENST00000474851 H7C1W4 665 aa9.21□□□□□ -0.94
LSAMP-203ENST00000474851 HSPA6P17066 643 aa9.21□□□□□ -0.94
LSAMP-203ENST00000474851 CWF19L2Q2TBE0 894 aaKnown RBP9.21□□□□□ -0.94
LSAMP-203ENST00000474851 BCORQ6W2J9 1755 aa9.21□□□□□ -0.94
LSAMP-203ENST00000474851 CEP350Q5VT06 3117 aa9.2□□□□□ -0.94
LSAMP-203ENST00000474851 NEURL1BA8MQ27 555 aa9.2□□□□□ -0.94
LSAMP-203ENST00000474851 CASP7P55210 303 aa9.2□□□□□ -0.94
LSAMP-203ENST00000474851 RPS8P62241 208 aaKnown RBP9.2□□□□□ -0.94
LSAMP-203ENST00000474851 SLFN5Q08AF3 891 aa9.2□□□□□ -0.94
LSAMP-203ENST00000474851 TRMT2AQ8IZ69 625 aaKnown RBP9.2□□□□□ -0.94
LSAMP-203ENST00000474851 L3MBTL3Q96JM7 780 aaPredicted RBP9.2□□□□□ -0.94
LSAMP-203ENST00000474851 VPS33BQ9H267 617 aa9.2□□□□□ -0.94
LSAMP-203ENST00000474851 SEC31BQ9NQW1 1179 aa9.2□□□□□ -0.94
LSAMP-203ENST00000474851 ZNF541Q9H0D2 1346 aa9.2□□□□□ -0.94
LSAMP-203ENST00000474851 LAMB4A4D0S4 1761 aa9.19□□□□□ -0.94
LSAMP-203ENST00000474851 BRCA1P38398 1863 aaKnown RBP9.19□□□□□ -0.94
LSAMP-203ENST00000474851 ANKRD31Q8N7Z5 1873 aa9.19□□□□□ -0.94
LSAMP-203ENST00000474851 E9PSI1 815 aa9.19□□□□□ -0.94
LSAMP-203ENST00000474851 F6X3S4 739 aa9.19□□□□□ -0.94
LSAMP-203ENST00000474851 PDE8AO60658 829 aa9.19□□□□□ -0.94
LSAMP-203ENST00000474851 FSTL1Q12841 308 aa9.19□□□□□ -0.94
LSAMP-203ENST00000474851 GCKRQ14397 625 aa9.19□□□□□ -0.94
LSAMP-203ENST00000474851 TMC4Q7Z404 712 aa9.19□□□□□ -0.94
LSAMP-203ENST00000474851 MPNDQ8N594 471 aa9.19□□□□□ -0.94
LSAMP-203ENST00000474851 DNAAF4Q8WXU2 420 aa9.19□□□□□ -0.94
LSAMP-203ENST00000474851 CDCA7LQ96GN5 454 aa9.19□□□□□ -0.94
LSAMP-203ENST00000474851 SPDYE4A6NLX3 237 aa9.18□□□□□ -0.94
LSAMP-203ENST00000474851 POTEIP0CG38 1075 aa9.18□□□□□ -0.94
LSAMP-203ENST00000474851 POTEJP0CG39 1038 aa9.18□□□□□ -0.94
LSAMP-203ENST00000474851 HSP90B1P14625 803 aaKnown RBP9.18□□□□□ -0.94
LSAMP-203ENST00000474851 KIAA2012Q0VF49 1180 aa9.18□□□□□ -0.94
LSAMP-203ENST00000474851 NEXNQ0ZGT2 675 aa9.18□□□□□ -0.94
LSAMP-203ENST00000474851 FKBP5Q13451 457 aaPredicted RBP9.18□□□□□ -0.94
LSAMP-203ENST00000474851 CHD4Q14839 1912 aa9.18□□□□□ -0.94
LSAMP-203ENST00000474851 AOC3Q16853 763 aa9.18□□□□□ -0.94
LSAMP-203ENST00000474851 BEND3Q5T5X7 828 aa9.18□□□□□ -0.94
LSAMP-203ENST00000474851 DPP8Q6V1X1 898 aaPredicted RBP9.18□□□□□ -0.94
LSAMP-203ENST00000474851 C16orf71Q8IYS4 520 aaPredicted RBP9.18□□□□□ -0.94
LSAMP-203ENST00000474851 LARGE2Q8N3Y3 721 aa9.18□□□□□ -0.94
LSAMP-203ENST00000474851 DNAJC5GQ8N7S2 189 aa9.18□□□□□ -0.94
LSAMP-203ENST00000474851 LINS1Q8NG48 757 aa9.18□□□□□ -0.94
LSAMP-203ENST00000474851 TTLL11Q8NHH1 800 aa9.18□□□□□ -0.94
LSAMP-203ENST00000474851 JDP2Q8WYK2 163 aa9.18□□□□□ -0.94
LSAMP-203ENST00000474851 PLA2G12BQ9BX93 195 aa9.18□□□□□ -0.94
LSAMP-203ENST00000474851 CDHR2Q9BYE9 1310 aa9.18□□□□□ -0.94
LSAMP-203ENST00000474851 TAF1DQ9H5J8 278 aaPredicted RBP9.18□□□□□ -0.94
LSAMP-203ENST00000474851 POLLQ9UGP5 575 aa9.18□□□□□ -0.94
LSAMP-203ENST00000474851 SLX4Q8IY92 1834 aa9.17□□□□□ -0.94
LSAMP-203ENST00000474851 COL11A2P13942 1736 aaPredicted RBP9.17□□□□□ -0.94
LSAMP-203ENST00000474851 TNRC6CQ9HCJ0 1690 aaKnown RBP9.17□□□□□ -0.94
LSAMP-203ENST00000474851 PPIP5K2O43314 1243 aa9.17□□□□□ -0.94
LSAMP-203ENST00000474851 CSF1RP07333 972 aa9.17□□□□□ -0.94
LSAMP-203ENST00000474851 CTSWP56202 376 aa9.17□□□□□ -0.94
LSAMP-203ENST00000474851 GPSM2P81274 684 aa9.17□□□□□ -0.94
LSAMP-203ENST00000474851 CCDC152Q4G0S7 254 aa9.17□□□□□ -0.94
LSAMP-203ENST00000474851 MIER1Q8N108 512 aa9.17□□□□□ -0.94
LSAMP-203ENST00000474851 GPC2Q8N158 579 aa9.17□□□□□ -0.94
LSAMP-203ENST00000474851 MRPL50Q8N5N7 158 aaKnown RBP9.17□□□□□ -0.94
LSAMP-203ENST00000474851 SMC1BQ8NDV3 1235 aa9.17□□□□□ -0.94
LSAMP-203ENST00000474851 CCDC85AQ96PX6 553 aaPredicted RBP9.17□□□□□ -0.94
LSAMP-203ENST00000474851 TMX4Q9H1E5 349 aaPredicted RBP9.17□□□□□ -0.94
LSAMP-203ENST00000474851 NSFL1CQ9UNZ2 370 aaKnown RBP9.17□□□□□ -0.94
LSAMP-203ENST00000474851 ZBTB12Q9Y330 459 aaPredicted RBP9.17□□□□□ -0.94
LSAMP-203ENST00000474851 PRKCSHP14314 528 aaPredicted RBP9.16□□□□□ -0.94
LSAMP-203ENST00000474851 EIF6P56537 245 aaKnown RBP9.16□□□□□ -0.94
LSAMP-203ENST00000474851 CXCL9Q07325 125 aa9.16□□□□□ -0.94
LSAMP-203ENST00000474851 UBE3BQ7Z3V4 1068 aa9.16□□□□□ -0.94
LSAMP-203ENST00000474851 SUPT20HQ8NEM7 779 aa9.16□□□□□ -0.94
LSAMP-203ENST00000474851 SSH1Q8WYL5 1049 aa9.16□□□□□ -0.94
LSAMP-203ENST00000474851 GREM2Q9H772 168 aa9.16□□□□□ -0.94
LSAMP-203ENST00000474851 PODXL2Q9NZ53 605 aa9.16□□□□□ -0.94
LSAMP-203ENST00000474851 ZNRF3Q9ULT6 936 aa9.16□□□□□ -0.94
LSAMP-203ENST00000474851 ARFGEF1Q9Y6D6 1849 aa9.16□□□□□ -0.94
LSAMP-203ENST00000474851 COL4A5P29400 1685 aa9.16□□□□□ -0.94
LSAMP-203ENST00000474851 IQCA1LA6NCM1 817 aa9.15□□□□□ -0.94
LSAMP-203ENST00000474851 WTIPA6NIX2 430 aaPredicted RBP9.15□□□□□ -0.94
LSAMP-203ENST00000474851 YDJCA8MPS7 323 aa9.15□□□□□ -0.94
LSAMP-203ENST00000474851 SCNN1DP51172 638 aa9.15□□□□□ -0.94
LSAMP-203ENST00000474851 APLP1P51693 650 aa9.15□□□□□ -0.94
LSAMP-203ENST00000474851 HTRA3P83110 453 aa9.15□□□□□ -0.94
LSAMP-203ENST00000474851 FOXO4P98177 505 aa9.15□□□□□ -0.94
LSAMP-203ENST00000474851 NIM1KQ8IY84 436 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms