RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 PSMD1Q99460 953 aa20.41■□□□□ 0.86
ITGB1-210ENST00000474568 SEC31BQ9NQW1 1179 aa20.41■□□□□ 0.86
ITGB1-210ENST00000474568 TIAM2Q8IVF5 1701 aa20.41■□□□□ 0.86
ITGB1-210ENST00000474568 DDX60Q8IY21 1712 aaKnown RBP20.41■□□□□ 0.86
ITGB1-210ENST00000474568 DPY19L2Q6NUT2 758 aa20.4■□□□□ 0.86
ITGB1-210ENST00000474568 UBE3BQ7Z3V4 1068 aa20.4■□□□□ 0.86
ITGB1-210ENST00000474568 SP8Q8IXZ3 490 aa20.4■□□□□ 0.86
ITGB1-210ENST00000474568 BCL2L13Q9BXK5 485 aa20.4■□□□□ 0.86
ITGB1-210ENST00000474568 DDNO94850 711 aaPredicted RBP20.39■□□□□ 0.85
ITGB1-210ENST00000474568 HSP90B1P14625 803 aaKnown RBP20.39■□□□□ 0.85
ITGB1-210ENST00000474568 DPP8Q6V1X1 898 aaPredicted RBP20.39■□□□□ 0.85
ITGB1-210ENST00000474568 C16orf71Q8IYS4 520 aaPredicted RBP20.39■□□□□ 0.85
ITGB1-210ENST00000474568 CCDC88AQ3V6T2 1871 aa20.39■□□□□ 0.85
ITGB1-210ENST00000474568 CDHR2Q9BYE9 1310 aa20.38■□□□□ 0.85
ITGB1-210ENST00000474568 ZNF541Q9H0D2 1346 aa20.38■□□□□ 0.85
ITGB1-210ENST00000474568 GCKRQ14397 625 aa20.38■□□□□ 0.85
ITGB1-210ENST00000474568 CCDC152Q4G0S7 254 aa20.38■□□□□ 0.85
ITGB1-210ENST00000474568 LARGE2Q8N3Y3 721 aa20.38■□□□□ 0.85
ITGB1-210ENST00000474568 MPNDQ8N594 471 aa20.38■□□□□ 0.85
ITGB1-210ENST00000474568 MRPL50Q8N5N7 158 aaKnown RBP20.38■□□□□ 0.85
ITGB1-210ENST00000474568 LINS1Q8NG48 757 aa20.38■□□□□ 0.85
ITGB1-210ENST00000474568 COL4A1P02462 1669 aa20.38■□□□□ 0.85
ITGB1-210ENST00000474568 PPIP5K2O43314 1243 aa20.37■□□□□ 0.85
ITGB1-210ENST00000474568 AOC3Q16853 763 aa20.37■□□□□ 0.85
ITGB1-210ENST00000474568 GRIPAP1Q4V328 841 aa20.37■□□□□ 0.85
ITGB1-210ENST00000474568 SLC4A10Q6U841 1118 aa20.37■□□□□ 0.85
ITGB1-210ENST00000474568 SSH1Q8WYL5 1049 aa20.37■□□□□ 0.85
ITGB1-210ENST00000474568 H7C1W4 665 aa20.36■□□□□ 0.85
ITGB1-210ENST00000474568 CTSWP56202 376 aa20.36■□□□□ 0.85
ITGB1-210ENST00000474568 RPS8P62241 208 aaKnown RBP20.36■□□□□ 0.85
ITGB1-210ENST00000474568 BEND3Q5T5X7 828 aa20.36■□□□□ 0.85
ITGB1-210ENST00000474568 JDP2Q8WYK2 163 aa20.36■□□□□ 0.85
ITGB1-210ENST00000474568 TOMM70O94826 608 aa20.35■□□□□ 0.85
ITGB1-210ENST00000474568 HNRNPUQ00839 825 aaKnown RBP eCLIP20.35■□□□□ 0.85
ITGB1-210ENST00000474568 TRMT2AQ8IZ69 625 aaKnown RBP20.35■□□□□ 0.85
ITGB1-210ENST00000474568 COL4A5P29400 1685 aa20.35■□□□□ 0.85
ITGB1-210ENST00000474568 TAF1P21675 1872 aa20.35■□□□□ 0.85
ITGB1-210ENST00000474568 POTECB2RU33 542 aa20.34■□□□□ 0.85
ITGB1-210ENST00000474568 VEGFAP15692 232 aaPredicted RBP20.34■□□□□ 0.85
ITGB1-210ENST00000474568 GPSM2P81274 684 aa20.34■□□□□ 0.85
ITGB1-210ENST00000474568 TMC4Q7Z404 712 aa20.34■□□□□ 0.85
ITGB1-210ENST00000474568 SUPT20HQ8NEM7 779 aa20.34■□□□□ 0.85
ITGB1-210ENST00000474568 GREM2Q9H772 168 aa20.34■□□□□ 0.85
ITGB1-210ENST00000474568 NSFL1CQ9UNZ2 370 aaKnown RBP20.34■□□□□ 0.85
ITGB1-210ENST00000474568 FZD9O00144 591 aa20.33■□□□□ 0.85
ITGB1-210ENST00000474568 CASP7P55210 303 aa20.33■□□□□ 0.85
ITGB1-210ENST00000474568 NIM1KQ8IY84 436 aa20.33■□□□□ 0.85
ITGB1-210ENST00000474568 TTLL11Q8NHH1 800 aa20.33■□□□□ 0.85
ITGB1-210ENST00000474568 SMC4Q9NTJ3 1288 aa20.33■□□□□ 0.85
ITGB1-210ENST00000474568 GJA3Q9Y6H8 435 aa20.33■□□□□ 0.85
ITGB1-210ENST00000474568 EIF6P56537 245 aaKnown RBP20.32■□□□□ 0.84
ITGB1-210ENST00000474568 ANKRD18AQ8IVF6 992 aa20.32■□□□□ 0.84
ITGB1-210ENST00000474568 GPR101Q96P66 508 aaPredicted RBP20.32■□□□□ 0.84
ITGB1-210ENST00000474568 RTFDC1Q9BY42 306 aaPredicted RBP20.32■□□□□ 0.84
ITGB1-210ENST00000474568 DICER1Q9UPY3 1922 aaKnown RBP20.31■□□□□ 0.84
ITGB1-210ENST00000474568 C6orf229H3BNL8 230 aa20.31■□□□□ 0.84
ITGB1-210ENST00000474568 SRCIN1Q9C0H9 1055 aa20.31■□□□□ 0.84
ITGB1-210ENST00000474568 RIMBP2O15034 1052 aa20.3■□□□□ 0.84
ITGB1-210ENST00000474568 RBM46Q8TBY0 533 aaKnown RBP20.3■□□□□ 0.84
ITGB1-210ENST00000474568 KIAA2012Q0VF49 1180 aa20.29■□□□□ 0.84
ITGB1-210ENST00000474568 FAM161AQ3B820 660 aa20.29■□□□□ 0.84
ITGB1-210ENST00000474568 CDC5LQ99459 802 aaKnown RBP20.29■□□□□ 0.84
ITGB1-210ENST00000474568 PLA2G12BQ9BX93 195 aa20.29■□□□□ 0.84
ITGB1-210ENST00000474568 C9orf78Q9NZ63 289 aaPredicted RBP20.29■□□□□ 0.84
ITGB1-210ENST00000474568 ANKIB1Q9P2G1 1089 aa20.29■□□□□ 0.84
ITGB1-210ENST00000474568 POLLQ9UGP5 575 aa20.29■□□□□ 0.84
ITGB1-210ENST00000474568 CHMP3Q9Y3E7 222 aa20.29■□□□□ 0.84
ITGB1-210ENST00000474568 ALDH1L2Q3SY69 923 aa20.28■□□□□ 0.84
ITGB1-210ENST00000474568 PTPRCP08575 1304 aa20.27■□□□□ 0.84
ITGB1-210ENST00000474568 DUOX1Q9NRD9 1551 aa20.27■□□□□ 0.84
ITGB1-210ENST00000474568 GRM8O00222 908 aa20.27■□□□□ 0.84
ITGB1-210ENST00000474568 ALDH1L1O75891 902 aa20.27■□□□□ 0.84
ITGB1-210ENST00000474568 UFL1O94874 794 aa20.27■□□□□ 0.84
ITGB1-210ENST00000474568 POTEIP0CG38 1075 aa20.27■□□□□ 0.84
ITGB1-210ENST00000474568 POTEJP0CG39 1038 aa20.27■□□□□ 0.84
ITGB1-210ENST00000474568 ITGA6P23229 1130 aa20.27■□□□□ 0.84
ITGB1-210ENST00000474568 WASHC4Q2M389 1173 aa20.27■□□□□ 0.84
ITGB1-210ENST00000474568 TBC1D16Q8TBP0 767 aa20.27■□□□□ 0.84
ITGB1-210ENST00000474568 WDR90Q96KV7 1748 aa20.27■□□□□ 0.83
ITGB1-210ENST00000474568 CACNA1FO60840 1977 aa20.26■□□□□ 0.83
ITGB1-210ENST00000474568 HSPA6P17066 643 aa20.26■□□□□ 0.83
ITGB1-210ENST00000474568 EPHA10Q5JZY3 1008 aa20.26■□□□□ 0.83
ITGB1-210ENST00000474568 GPC2Q8N158 579 aa20.26■□□□□ 0.83
ITGB1-210ENST00000474568 L3MBTL3Q96JM7 780 aaPredicted RBP20.26■□□□□ 0.83
ITGB1-210ENST00000474568 VPS33BQ9H267 617 aa20.26■□□□□ 0.83
ITGB1-210ENST00000474568 ZNRF3Q9ULT6 936 aa20.26■□□□□ 0.83
ITGB1-210ENST00000474568 IQCA1LA6NCM1 817 aa20.25■□□□□ 0.83
ITGB1-210ENST00000474568 RAD17O75943 681 aa20.25■□□□□ 0.83
ITGB1-210ENST00000474568 CSF1RP07333 972 aa20.25■□□□□ 0.83
ITGB1-210ENST00000474568 IGHMBP2P38935 993 aaKnown RBP20.25■□□□□ 0.83
ITGB1-210ENST00000474568 FOXO4P98177 505 aa20.25■□□□□ 0.83
ITGB1-210ENST00000474568 DOK7Q18PE1 504 aa20.25■□□□□ 0.83
ITGB1-210ENST00000474568 EAPPQ56P03 285 aaPredicted RBP20.25■□□□□ 0.83
ITGB1-210ENST00000474568 SMC1BQ8NDV3 1235 aa20.25■□□□□ 0.83
ITGB1-210ENST00000474568 DBNDD1Q9H9R9 158 aa20.25■□□□□ 0.83
ITGB1-210ENST00000474568 HACL1Q9UJ83 578 aa20.25■□□□□ 0.83
ITGB1-210ENST00000474568 GGA1Q9UJY5 639 aa20.25■□□□□ 0.83
ITGB1-210ENST00000474568 NOB1Q9ULX3 412 aaKnown RBP20.25■□□□□ 0.83
ITGB1-210ENST00000474568 LRRC37AA6NMS7 1700 aa20.24■□□□□ 0.83
ITGB1-210ENST00000474568 RTL9Q8NET4 1388 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms