RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 GNAI3P08754 354 aa25.14■■□□□ 1.62
SF1-213ENST00000472725 NBPF7P0C2Y1 421 aaPredicted RBP25.14■■□□□ 1.62
SF1-213ENST00000472725 TMEM57Q8N5G2 664 aa25.14■■□□□ 1.62
SF1-213ENST00000472725 CSF1RP07333 972 aa25.13■■□□□ 1.61
SF1-213ENST00000472725 TMC4Q7Z404 712 aa25.13■■□□□ 1.61
SF1-213ENST00000472725 TTLL11Q8NHH1 800 aa25.13■■□□□ 1.61
SF1-213ENST00000472725 TNNQ9UQP3 1299 aa25.13■■□□□ 1.61
SF1-213ENST00000472725 GRIN3BO60391 1043 aa25.12■■□□□ 1.61
SF1-213ENST00000472725 BCS1LQ9Y276 419 aa25.12■■□□□ 1.61
SF1-213ENST00000472725 BBOX1O75936 387 aa25.11■■□□□ 1.61
SF1-213ENST00000472725 UBTFL1P0CB47 393 aaPredicted RBP25.11■■□□□ 1.61
SF1-213ENST00000472725 FOXO4P98177 505 aa25.11■■□□□ 1.61
SF1-213ENST00000472725 GPR162Q16538 588 aa25.11■■□□□ 1.61
SF1-213ENST00000472725 SOGA3Q5TF21 947 aa25.11■■□□□ 1.61
SF1-213ENST00000472725 PRPF40BQ6NWY9 871 aaKnown RBP25.11■■□□□ 1.61
SF1-213ENST00000472725 SLX4Q8IY92 1834 aa25.1■■□□□ 1.61
SF1-213ENST00000472725 RLBP1P12271 317 aa25.1■■□□□ 1.61
SF1-213ENST00000472725 GRAPQ13588 217 aa25.1■■□□□ 1.61
SF1-213ENST00000472725 GRIPAP1Q4V328 841 aa25.1■■□□□ 1.61
SF1-213ENST00000472725 GRAPLQ8TC17 118 aaPredicted RBP25.1■■□□□ 1.61
SF1-213ENST00000472725 CHMP4BQ9H444 224 aaKnown RBP25.1■■□□□ 1.61
SF1-213ENST00000472725 CACNA1SQ13698 1873 aa25.1■■□□□ 1.61
SF1-213ENST00000472725 CC2D2BQ6DHV5 1058 aa25.09■■□□□ 1.61
SF1-213ENST00000472725 SUCLG2Q96I99 432 aa25.09■■□□□ 1.61
SF1-213ENST00000472725 PLIN1O60240 522 aa25.08■■□□□ 1.61
SF1-213ENST00000472725 RRP1P56182 461 aaKnown RBP25.08■■□□□ 1.61
SF1-213ENST00000472725 RABL6Q3YEC7 729 aaPredicted RBP25.08■■□□□ 1.61
SF1-213ENST00000472725 ITPRIPQ8IWB1 547 aa25.08■■□□□ 1.61
SF1-213ENST00000472725 CDC5LQ99459 802 aaKnown RBP25.08■■□□□ 1.61
SF1-213ENST00000472725 YBX3P16989 372 aaKnown RBP eCLIP25.07■■□□□ 1.6
SF1-213ENST00000472725 PANK1Q8TE04 598 aa25.07■■□□□ 1.6
SF1-213ENST00000472725 KAZALD1Q96I82 304 aa25.07■■□□□ 1.6
SF1-213ENST00000472725 MEIS3Q99687 375 aa25.07■■□□□ 1.6
SF1-213ENST00000472725 DDX19BQ9UMR2 479 aa25.07■■□□□ 1.6
SF1-213ENST00000472725 MVPQ14764 893 aaKnown RBP25.06■■□□□ 1.6
SF1-213ENST00000472725 LMBR1LQ6UX01 489 aa25.06■■□□□ 1.6
SF1-213ENST00000472725 PELP1Q8IZL8 1130 aaKnown RBP25.06■■□□□ 1.6
SF1-213ENST00000472725 C7orf43Q8WVR3 580 aa25.06■■□□□ 1.6
SF1-213ENST00000472725 TMX4Q9H1E5 349 aaPredicted RBP25.06■■□□□ 1.6
SF1-213ENST00000472725 PPEF1O14829 653 aaPredicted RBP25.05■■□□□ 1.6
SF1-213ENST00000472725 RPS8P62241 208 aaKnown RBP25.05■■□□□ 1.6
SF1-213ENST00000472725 EPHA10Q5JZY3 1008 aa25.05■■□□□ 1.6
SF1-213ENST00000472725 BICC1Q9H694 974 aaKnown RBP25.05■■□□□ 1.6
SF1-213ENST00000472725 GREM2Q9H772 168 aa25.05■■□□□ 1.6
SF1-213ENST00000472725 ZBTB7BO15156 539 aaPredicted RBP25.04■■□□□ 1.6
SF1-213ENST00000472725 IFIT5Q13325 482 aaKnown RBP25.04■■□□□ 1.6
SF1-213ENST00000472725 SP8Q8IXZ3 490 aa25.04■■□□□ 1.6
SF1-213ENST00000472725 ATP6V0A2Q9Y487 856 aa25.04■■□□□ 1.6
SF1-213ENST00000472725 TAF1P21675 1872 aa25.03■■□□□ 1.6
SF1-213ENST00000472725 ANKRD18BA2A2Z9 1011 aa25.03■■□□□ 1.6
SF1-213ENST00000472725 GNAI2P04899 355 aa25.03■■□□□ 1.6
SF1-213ENST00000472725 ITGA6P23229 1130 aa25.03■■□□□ 1.6
SF1-213ENST00000472725 CCDC57Q2TAC2 916 aa25.03■■□□□ 1.6
SF1-213ENST00000472725 ANKRD18AQ8IVF6 992 aa25.03■■□□□ 1.6
SF1-213ENST00000472725 C21orf2O43822 256 aa25.02■■□□□ 1.6
SF1-213ENST00000472725 FAM161AQ3B820 660 aa25.02■■□□□ 1.6
SF1-213ENST00000472725 CCDC93Q567U6 631 aa25.02■■□□□ 1.6
SF1-213ENST00000472725 RTKN2Q8IZC4 609 aa25.02■■□□□ 1.6
SF1-213ENST00000472725 ANKRD44Q8N8A2 993 aa25.02■■□□□ 1.6
SF1-213ENST00000472725 CELF1Q92879 486 aaKnown RBP25.02■■□□□ 1.6
SF1-213ENST00000472725 SEC31BQ9NQW1 1179 aa25.02■■□□□ 1.6
SF1-213ENST00000472725 WWC3Q9ULE0 1092 aa25.02■■□□□ 1.6
SF1-213ENST00000472725 CCDC85AQ96PX6 553 aaPredicted RBP25.01■■□□□ 1.59
SF1-213ENST00000472725 LRRFIP2Q9Y608 721 aaKnown RBP25.01■■□□□ 1.59
SF1-213ENST00000472725 LRRC37AA6NMS7 1700 aa25■■□□□ 1.59
SF1-213ENST00000472725 FER1L6Q2WGJ9 1857 aa25■■□□□ 1.59
SF1-213ENST00000472725 IGHMBP2P38935 993 aaKnown RBP25■■□□□ 1.59
SF1-213ENST00000472725 BSDC1Q9NW68 430 aaPredicted RBP25■■□□□ 1.59
SF1-213ENST00000472725 COG6Q9Y2V7 657 aa25■■□□□ 1.59
SF1-213ENST00000472725 CHMP3Q9Y3E7 222 aa25■■□□□ 1.59
SF1-213ENST00000472725 MTX1Q13505 466 aa24.99■■□□□ 1.59
SF1-213ENST00000472725 LTBP3Q9NS15 1303 aa24.99■■□□□ 1.59
SF1-213ENST00000472725 C20orf194Q5TEA3 1177 aa24.98■■□□□ 1.59
SF1-213ENST00000472725 ARHGAP27Q6ZUM4 889 aa24.97■■□□□ 1.59
SF1-213ENST00000472725 MPHOSPH8Q99549 860 aa24.97■■□□□ 1.59
SF1-213ENST00000472725 SNED1Q8TER0 1413 aa24.96■■□□□ 1.59
SF1-213ENST00000472725 TAF7LQ5H9L4 462 aa24.96■■□□□ 1.59
SF1-213ENST00000472725 PSMD1Q99460 953 aa24.96■■□□□ 1.59
SF1-213ENST00000472725 ZBTB40Q9NUA8 1239 aa24.95■■□□□ 1.58
SF1-213ENST00000472725 ZNF219Q9P2Y4 722 aaPredicted RBP24.95■■□□□ 1.58
SF1-213ENST00000472725 FBXO3Q9UK99 471 aa24.95■■□□□ 1.58
SF1-213ENST00000472725 COL4A1P02462 1669 aa24.94■■□□□ 1.58
SF1-213ENST00000472725 TAOK3Q9H2K8 898 aa24.94■■□□□ 1.58
SF1-213ENST00000472725 SUPT16HQ9Y5B9 1047 aaKnown RBP24.94■■□□□ 1.58
SF1-213ENST00000472725 SPEF2Q9C093 1822 aa24.93■■□□□ 1.58
SF1-213ENST00000472725 CHD4Q14839 1912 aa24.93■■□□□ 1.58
SF1-213ENST00000472725 FKBP4Q02790 459 aaKnown RBP eCLIP24.93■■□□□ 1.58
SF1-213ENST00000472725 MPNDQ8N594 471 aa24.93■■□□□ 1.58
SF1-213ENST00000472725 SUPT20HQ8NEM7 779 aa24.93■■□□□ 1.58
SF1-213ENST00000472725 RTFDC1Q9BY42 306 aaPredicted RBP24.93■■□□□ 1.58
SF1-213ENST00000472725 VPS33BQ9H267 617 aa24.93■■□□□ 1.58
SF1-213ENST00000472725 PODXL2Q9NZ53 605 aa24.93■■□□□ 1.58
SF1-213ENST00000472725 AAMPQ13685 434 aa24.92■■□□□ 1.58
SF1-213ENST00000472725 LDHAL6AQ6ZMR3 332 aa24.92■■□□□ 1.58
SF1-213ENST00000472725 ANKRD2Q9GZV1 360 aa24.92■■□□□ 1.58
SF1-213ENST00000472725 NFKBIEO00221 500 aa24.91■■□□□ 1.58
SF1-213ENST00000472725 RFX5P48382 616 aaPredicted RBP24.91■■□□□ 1.58
SF1-213ENST00000472725 DPP8Q6V1X1 898 aaPredicted RBP24.91■■□□□ 1.58
SF1-213ENST00000472725 MINPP1Q9UNW1 487 aa24.91■■□□□ 1.58
SF1-213ENST00000472725 SBF1O95248 1867 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms