RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 EPHA10Q5JZY3 1008 aa15.88■□□□□ 0.13
SND1-209ENST00000470723 SUCLG2Q96I99 432 aa15.88■□□□□ 0.13
SND1-209ENST00000470723 CHMP4BQ9H444 224 aaKnown RBP15.88■□□□□ 0.13
SND1-209ENST00000470723 RTL9Q8NET4 1388 aa15.87■□□□□ 0.13
SND1-209ENST00000470723 UBTFL1P0CB47 393 aaPredicted RBP15.87■□□□□ 0.13
SND1-209ENST00000470723 CHRNA5P30532 468 aa15.87■□□□□ 0.13
SND1-209ENST00000470723 ALDH1B1P30837 517 aa15.87■□□□□ 0.13
SND1-209ENST00000470723 CTSWP56202 376 aa15.87■□□□□ 0.13
SND1-209ENST00000470723 ITPRIPQ8IWB1 547 aa15.87■□□□□ 0.13
SND1-209ENST00000470723 NLGN2Q8NFZ4 835 aa15.87■□□□□ 0.13
SND1-209ENST00000470723 ZBTB40Q9NUA8 1239 aa15.87■□□□□ 0.13
SND1-209ENST00000470723 PIM2Q9P1W9 311 aa15.87■□□□□ 0.13
SND1-209ENST00000470723 COG6Q9Y2V7 657 aa15.87■□□□□ 0.13
SND1-209ENST00000470723 KIAA1551Q9HCM1 1747 aa15.87■□□□□ 0.13
SND1-209ENST00000470723 BBOX1O75936 387 aa15.86■□□□□ 0.13
SND1-209ENST00000470723 CENPBP07199 599 aaPredicted RBP15.86■□□□□ 0.13
SND1-209ENST00000470723 CCDC152Q4G0S7 254 aa15.86■□□□□ 0.13
SND1-209ENST00000470723 ANKRD44Q8N8A2 993 aa15.86■□□□□ 0.13
SND1-209ENST00000470723 CNKSR1Q969H4 720 aa15.86■□□□□ 0.13
SND1-209ENST00000470723 RBM17Q96I25 401 aaKnown RBP15.86■□□□□ 0.13
SND1-209ENST00000470723 GNAI2P04899 355 aa15.85■□□□□ 0.13
SND1-209ENST00000470723 MTX1Q13505 466 aa15.85■□□□□ 0.13
SND1-209ENST00000470723 LMBR1LQ6UX01 489 aa15.85■□□□□ 0.13
SND1-209ENST00000470723 TTLL6Q8N841 843 aa15.85■□□□□ 0.13
SND1-209ENST00000470723 C7orf43Q8WVR3 580 aa15.85■□□□□ 0.13
SND1-209ENST00000470723 LAMB2P55268 1798 aa15.85■□□□□ 0.13
SND1-209ENST00000470723 MYH3P11055 1940 aa15.84■□□□□ 0.13
SND1-209ENST00000470723 AAMPQ13685 434 aa15.84■□□□□ 0.13
SND1-209ENST00000470723 DDX46Q7L014 1031 aaKnown RBP15.84■□□□□ 0.13
SND1-209ENST00000470723 RPGRQ92834 1020 aaKnown RBP15.84■□□□□ 0.13
SND1-209ENST00000470723 BICC1Q9H694 974 aaKnown RBP15.84■□□□□ 0.13
SND1-209ENST00000470723 TNRC6CQ9HCJ0 1690 aaKnown RBP15.83■□□□□ 0.13
SND1-209ENST00000470723 RPS8P62241 208 aaKnown RBP15.83■□□□□ 0.12
SND1-209ENST00000470723 ZNF622Q969S3 477 aaKnown RBP eCLIP15.83■□□□□ 0.12
SND1-209ENST00000470723 GREM2Q9H772 168 aa15.83■□□□□ 0.12
SND1-209ENST00000470723 LRRFIP2Q9Y608 721 aaKnown RBP15.83■□□□□ 0.12
SND1-209ENST00000470723 GOLGB1Q14789 3259 aaKnown RBP15.83■□□□□ 0.12
SND1-209ENST00000470723 DLEC1Q9Y238 1755 aa15.82■□□□□ 0.12
SND1-209ENST00000470723 BRCA1P38398 1863 aaKnown RBP15.82■□□□□ 0.12
SND1-209ENST00000470723 ATP8B2P98198 1209 aa15.82■□□□□ 0.12
SND1-209ENST00000470723 GRAPQ13588 217 aa15.82■□□□□ 0.12
SND1-209ENST00000470723 DALRD3Q5D0E6 543 aaKnown RBP15.82■□□□□ 0.12
SND1-209ENST00000470723 TMC4Q7Z404 712 aa15.82■□□□□ 0.12
SND1-209ENST00000470723 KLHL34Q8N239 644 aa15.82■□□□□ 0.12
SND1-209ENST00000470723 GRAPLQ8TC17 118 aaPredicted RBP15.82■□□□□ 0.12
SND1-209ENST00000470723 SEC31BQ9NQW1 1179 aa15.82■□□□□ 0.12
SND1-209ENST00000470723 RFX5P48382 616 aaPredicted RBP15.81■□□□□ 0.12
SND1-209ENST00000470723 IFIT5Q13325 482 aaKnown RBP15.81■□□□□ 0.12
SND1-209ENST00000470723 SP8Q8IXZ3 490 aa15.81■□□□□ 0.12
SND1-209ENST00000470723 COL11A2P13942 1736 aaPredicted RBP15.8■□□□□ 0.12
SND1-209ENST00000470723 ANKRD18BA2A2Z9 1011 aa15.8■□□□□ 0.12
SND1-209ENST00000470723 ITGA6P23229 1130 aa15.8■□□□□ 0.12
SND1-209ENST00000470723 CC2D2BQ6DHV5 1058 aa15.8■□□□□ 0.12
SND1-209ENST00000470723 RPAP2Q8IXW5 612 aaPredicted RBP15.8■□□□□ 0.12
SND1-209ENST00000470723 CELF1Q92879 486 aaKnown RBP15.8■□□□□ 0.12
SND1-209ENST00000470723 CDC5LQ99459 802 aaKnown RBP15.8■□□□□ 0.12
SND1-209ENST00000470723 BSDC1Q9NW68 430 aaPredicted RBP15.8■□□□□ 0.12
SND1-209ENST00000470723 SLX4Q8IY92 1834 aa15.8■□□□□ 0.12
SND1-209ENST00000470723 CCDC57Q2TAC2 916 aa15.79■□□□□ 0.12
SND1-209ENST00000470723 FAM161AQ3B820 660 aa15.79■□□□□ 0.12
SND1-209ENST00000470723 GRIPAP1Q4V328 841 aa15.79■□□□□ 0.12
SND1-209ENST00000470723 PRPF40BQ6NWY9 871 aaKnown RBP15.79■□□□□ 0.12
SND1-209ENST00000470723 SSH3Q8TE77 659 aa15.79■□□□□ 0.12
SND1-209ENST00000470723 CRBNQ96SW2 442 aa15.79■□□□□ 0.12
SND1-209ENST00000470723 ATP6V0A2Q9Y487 856 aa15.79■□□□□ 0.12
SND1-209ENST00000470723 TAF1P21675 1872 aa15.78■□□□□ 0.12
SND1-209ENST00000470723 POLA2Q14181 598 aa15.78■□□□□ 0.12
SND1-209ENST00000470723 ANKRD18AQ8IVF6 992 aa15.78■□□□□ 0.12
SND1-209ENST00000470723 CCDC85AQ96PX6 553 aaPredicted RBP15.78■□□□□ 0.12
SND1-209ENST00000470723 COPRSQ9NQ92 184 aa15.78■□□□□ 0.12
SND1-209ENST00000470723 FBXO3Q9UK99 471 aa15.78■□□□□ 0.12
SND1-209ENST00000470723 PTPN12Q05209 780 aaKnown RBP15.77■□□□□ 0.12
SND1-209ENST00000470723 SOGA3Q5TF21 947 aa15.77■□□□□ 0.12
SND1-209ENST00000470723 CEP85Q6P2H3 762 aa15.77■□□□□ 0.12
SND1-209ENST00000470723 PNMA6EA0A0J9YXQ4 647 aa15.76■□□□□ 0.11
SND1-209ENST00000470723 SRGAP3O43295 1099 aa15.76■□□□□ 0.11
SND1-209ENST00000470723 SIRT2Q8IXJ6 389 aa15.76■□□□□ 0.11
SND1-209ENST00000470723 BCS1LQ9Y276 419 aa15.76■□□□□ 0.11
SND1-209ENST00000470723 RIPOR2Q9Y4F9 1068 aa15.76■□□□□ 0.11
SND1-209ENST00000470723 ARFGEF1Q9Y6D6 1849 aa15.75■□□□□ 0.11
SND1-209ENST00000470723 PPEF1O14829 653 aaPredicted RBP15.75■□□□□ 0.11
SND1-209ENST00000470723 YBX3P16989 372 aaKnown RBP eCLIP15.75■□□□□ 0.111e-12■□□□□ 10
SND1-209ENST00000470723 IGHMBP2P38935 993 aaKnown RBP15.75■□□□□ 0.11
SND1-209ENST00000470723 C1orf115Q9H7X2 142 aa15.75■□□□□ 0.11
SND1-209ENST00000470723 PODXL2Q9NZ53 605 aa15.75■□□□□ 0.11
SND1-209ENST00000470723 MINPP1Q9UNW1 487 aa15.75■□□□□ 0.11
SND1-209ENST00000470723 NOP58Q9Y2X3 529 aaKnown RBP15.75■□□□□ 0.11
SND1-209ENST00000470723 CHMP3Q9Y3E7 222 aa15.75■□□□□ 0.11
SND1-209ENST00000470723 UTRNP46939 3433 aa15.75■□□□□ 0.11
SND1-209ENST00000470723 COL4A1P02462 1669 aa15.74■□□□□ 0.11
SND1-209ENST00000470723 C21orf2O43822 256 aa15.74■□□□□ 0.11
SND1-209ENST00000470723 GRIN3BO60391 1043 aa15.74■□□□□ 0.11
SND1-209ENST00000470723 CIAO1O76071 339 aa15.74■□□□□ 0.11
SND1-209ENST00000470723 LDHAL6AQ6ZMR3 332 aa15.74■□□□□ 0.11
SND1-209ENST00000470723 RTKN2Q8IZC4 609 aa15.74■□□□□ 0.11
SND1-209ENST00000470723 EXOC6Q8TAG9 804 aa15.74■□□□□ 0.11
SND1-209ENST00000470723 ZNF594Q96JF6 807 aaPredicted RBP15.74■□□□□ 0.11
SND1-209ENST00000470723 MPHOSPH8Q99549 860 aa15.74■□□□□ 0.11
SND1-209ENST00000470723 RTFDC1Q9BY42 306 aaPredicted RBP15.74■□□□□ 0.11
SND1-209ENST00000470723 PCDHB15Q9Y5E8 787 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms