RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 JARID2Q92833 1246 aaPredicted RBP12.39□□□□□ -0.43
SRRT-208ENST00000469602 GPBP1L1Q9HC44 474 aaPredicted RBP12.39□□□□□ -0.43
SRRT-208ENST00000469602 ATP6V0A2Q9Y487 856 aa12.39□□□□□ -0.43
SRRT-208ENST00000469602 LRRC37AA6NMS7 1700 aa12.39□□□□□ -0.43
SRRT-208ENST00000469602 PDE8AO60658 829 aa12.38□□□□□ -0.43
SRRT-208ENST00000469602 GCKRQ14397 625 aa12.38□□□□□ -0.43
SRRT-208ENST00000469602 ALDH1L2Q3SY69 923 aa12.38□□□□□ -0.43
SRRT-208ENST00000469602 TMX4Q9H1E5 349 aaPredicted RBP12.38□□□□□ -0.43
SRRT-208ENST00000469602 H7C1W4 665 aa12.37□□□□□ -0.43
SRRT-208ENST00000469602 BEND3Q5T5X7 828 aa12.37□□□□□ -0.43
SRRT-208ENST00000469602 UBE3BQ7Z3V4 1068 aa12.37□□□□□ -0.43
SRRT-208ENST00000469602 TMC4Q7Z404 712 aa12.37□□□□□ -0.43
SRRT-208ENST00000469602 SLC51AQ86UW1 340 aa12.37□□□□□ -0.43
SRRT-208ENST00000469602 PSMD1Q99460 953 aa12.37□□□□□ -0.43
SRRT-208ENST00000469602 BCL2L13Q9BXK5 485 aa12.37□□□□□ -0.43
SRRT-208ENST00000469602 ZNF277Q9NRM2 450 aaPredicted RBP12.37□□□□□ -0.43
SRRT-208ENST00000469602 COL4A1P02462 1669 aa12.37□□□□□ -0.43
SRRT-208ENST00000469602 PTPRCP08575 1304 aa12.37□□□□□ -0.43
SRRT-208ENST00000469602 CTSWP56202 376 aa12.36□□□□□ -0.43
SRRT-208ENST00000469602 CCDC152Q4G0S7 254 aa12.36□□□□□ -0.43
SRRT-208ENST00000469602 SP8Q8IXZ3 490 aa12.36□□□□□ -0.43
SRRT-208ENST00000469602 CELF1Q92879 486 aaKnown RBP12.36□□□□□ -0.43
SRRT-208ENST00000469602 SMC4Q9NTJ3 1288 aa12.36□□□□□ -0.43
SRRT-208ENST00000469602 KDM2BQ8NHM5 1336 aa12.36□□□□□ -0.43
SRRT-208ENST00000469602 SPEF2Q9C093 1822 aa12.35□□□□□ -0.43
SRRT-208ENST00000469602 CASP7P55210 303 aa12.35□□□□□ -0.43
SRRT-208ENST00000469602 SLC4A10Q6U841 1118 aa12.35□□□□□ -0.43
SRRT-208ENST00000469602 ZBED9Q6R2W3 1325 aa12.35□□□□□ -0.43
SRRT-208ENST00000469602 LTBP1Q14766 1721 aa12.34□□□□□ -0.43
SRRT-208ENST00000469602 RTL9Q8NET4 1388 aa12.34□□□□□ -0.43
SRRT-208ENST00000469602 GLTPD2A6NH11 291 aa12.34□□□□□ -0.43
SRRT-208ENST00000469602 ALDH1L1O75891 902 aa12.34□□□□□ -0.43
SRRT-208ENST00000469602 IARSP41252 1262 aaKnown RBP12.34□□□□□ -0.43
SRRT-208ENST00000469602 RPS8P62241 208 aaKnown RBP12.34□□□□□ -0.43
SRRT-208ENST00000469602 TTLL11Q8NHH1 800 aa12.34□□□□□ -0.43
SRRT-208ENST00000469602 CCDC85AQ96PX6 553 aaPredicted RBP12.34□□□□□ -0.43
SRRT-208ENST00000469602 PLA2G12BQ9BX93 195 aa12.34□□□□□ -0.43
SRRT-208ENST00000469602 SRCIN1Q9C0H9 1055 aa12.34□□□□□ -0.43
SRRT-208ENST00000469602 SEC31BQ9NQW1 1179 aa12.34□□□□□ -0.43
SRRT-208ENST00000469602 RARSP54136 660 aaKnown RBP12.33□□□□□ -0.44
SRRT-208ENST00000469602 DPP8Q6V1X1 898 aaPredicted RBP12.33□□□□□ -0.44
SRRT-208ENST00000469602 MPNDQ8N594 471 aa12.33□□□□□ -0.44
SRRT-208ENST00000469602 RTFDC1Q9BY42 306 aaPredicted RBP12.33□□□□□ -0.44
SRRT-208ENST00000469602 NMRK2Q9NPI5 230 aa12.33□□□□□ -0.44
SRRT-208ENST00000469602 DUOX1Q9NRD9 1551 aa12.33□□□□□ -0.44
SRRT-208ENST00000469602 COL4A5P29400 1685 aa12.32□□□□□ -0.44
SRRT-208ENST00000469602 WDR90Q96KV7 1748 aa12.32□□□□□ -0.44
SRRT-208ENST00000469602 GRM8O00222 908 aa12.32□□□□□ -0.44
SRRT-208ENST00000469602 BRPF1P55201 1214 aaPredicted RBP12.32□□□□□ -0.44
SRRT-208ENST00000469602 DPY19L2Q6NUT2 758 aa12.32□□□□□ -0.44
SRRT-208ENST00000469602 SUPT20HQ8NEM7 779 aa12.32□□□□□ -0.44
SRRT-208ENST00000469602 GREM2Q9H772 168 aa12.32□□□□□ -0.44
SRRT-208ENST00000469602 C9orf78Q9NZ63 289 aaPredicted RBP12.32□□□□□ -0.44
SRRT-208ENST00000469602 KIF3CO14782 793 aa12.31□□□□□ -0.44
SRRT-208ENST00000469602 CSF1RP07333 972 aa12.31□□□□□ -0.44
SRRT-208ENST00000469602 ANKRD18AQ8IVF6 992 aa12.31□□□□□ -0.44
SRRT-208ENST00000469602 LARGE2Q8N3Y3 721 aa12.31□□□□□ -0.44
SRRT-208ENST00000469602 JDP2Q8WYK2 163 aa12.31□□□□□ -0.44
SRRT-208ENST00000469602 CDC5LQ99459 802 aaKnown RBP12.31□□□□□ -0.44
SRRT-208ENST00000469602 VPS33BQ9H267 617 aa12.31□□□□□ -0.44
SRRT-208ENST00000469602 NOB1Q9ULX3 412 aaKnown RBP12.31□□□□□ -0.44
SRRT-208ENST00000469602 FZD9O00144 591 aa12.3□□□□□ -0.44
SRRT-208ENST00000469602 PPIP5K2O43314 1243 aa12.3□□□□□ -0.44
SRRT-208ENST00000469602 GPSM2P81274 684 aa12.3□□□□□ -0.44
SRRT-208ENST00000469602 FOXO4P98177 505 aa12.3□□□□□ -0.44
SRRT-208ENST00000469602 AOC3Q16853 763 aa12.3□□□□□ -0.44
SRRT-208ENST00000469602 FAM161AQ3B820 660 aa12.3□□□□□ -0.44
SRRT-208ENST00000469602 RRAGCQ9HB90 399 aa12.3□□□□□ -0.44
SRRT-208ENST00000469602 NSFL1CQ9UNZ2 370 aaKnown RBP12.3□□□□□ -0.44
SRRT-208ENST00000469602 UTYO14607 1347 aa12.3□□□□□ -0.44
SRRT-208ENST00000469602 KIF16BQ96L93 1317 aa12.3□□□□□ -0.44
SRRT-208ENST00000469602 ZNF541Q9H0D2 1346 aa12.3□□□□□ -0.44
SRRT-208ENST00000469602 SCN4AP35499 1836 aa12.3□□□□□ -0.44
SRRT-208ENST00000469602 DDNO94850 711 aaPredicted RBP12.29□□□□□ -0.44
SRRT-208ENST00000469602 ITGA6P23229 1130 aa12.29□□□□□ -0.44
SRRT-208ENST00000469602 C1QTNF8P60827 252 aa12.29□□□□□ -0.44
SRRT-208ENST00000469602 KIAA2012Q0VF49 1180 aa12.29□□□□□ -0.44
SRRT-208ENST00000469602 API5Q9BZZ5 524 aaKnown RBP12.29□□□□□ -0.44
SRRT-208ENST00000469602 PODXL2Q9NZ53 605 aa12.29□□□□□ -0.44
SRRT-208ENST00000469602 CEP350Q5VT06 3117 aa12.28□□□□□ -0.44
SRRT-208ENST00000469602 NBPF7P0C2Y1 421 aaPredicted RBP12.28□□□□□ -0.44
SRRT-208ENST00000469602 VEGFAP15692 232 aaPredicted RBP12.28□□□□□ -0.44
SRRT-208ENST00000469602 CCT4P50991 539 aaKnown RBP12.28□□□□□ -0.44
SRRT-208ENST00000469602 EPHA10Q5JZY3 1008 aa12.28□□□□□ -0.44
SRRT-208ENST00000469602 NIM1KQ8IY84 436 aa12.28□□□□□ -0.44
SRRT-208ENST00000469602 TBC1D16Q8TBP0 767 aa12.28□□□□□ -0.44
SRRT-208ENST00000469602 ARHGAP45Q92619 1136 aa12.28□□□□□ -0.44
SRRT-208ENST00000469602 BSDC1Q9NW68 430 aaPredicted RBP12.28□□□□□ -0.44
SRRT-208ENST00000469602 ANKIB1Q9P2G1 1089 aa12.28□□□□□ -0.44
SRRT-208ENST00000469602 POLLQ9UGP5 575 aa12.28□□□□□ -0.44
SRRT-208ENST00000469602 ANKRD18BA2A2Z9 1011 aa12.27□□□□□ -0.45
SRRT-208ENST00000469602 POTECB2RU33 542 aa12.27□□□□□ -0.45
SRRT-208ENST00000469602 C6orf229H3BNL8 230 aa12.27□□□□□ -0.45
SRRT-208ENST00000469602 BCAR3O75815 825 aa12.27□□□□□ -0.45
SRRT-208ENST00000469602 IGHMBP2P38935 993 aaKnown RBP12.27□□□□□ -0.45
SRRT-208ENST00000469602 EIF6P56537 245 aaKnown RBP12.27□□□□□ -0.45
SRRT-208ENST00000469602 IFIT5Q13325 482 aaKnown RBP12.27□□□□□ -0.45
SRRT-208ENST00000469602 WASHC4Q2M389 1173 aa12.27□□□□□ -0.45
SRRT-208ENST00000469602 LMBR1LQ6UX01 489 aa12.27□□□□□ -0.45
SRRT-208ENST00000469602 C16orf71Q8IYS4 520 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms