RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 COG6Q9Y2V7 657 aa17.17■□□□□ 0.34
LMNA-210ENST00000469565 DDX60Q8IY21 1712 aaKnown RBP17.16■□□□□ 0.34
LMNA-210ENST00000469565 NBPF7P0C2Y1 421 aaPredicted RBP17.16■□□□□ 0.34
LMNA-210ENST00000469565 HSP90B1P14625 803 aaKnown RBP17.16■□□□□ 0.34
LMNA-210ENST00000469565 PRELPP51888 382 aa17.16■□□□□ 0.34
LMNA-210ENST00000469565 PDE3AQ14432 1141 aa17.16■□□□□ 0.34
LMNA-210ENST00000469565 SLC10A5Q5PT55 438 aa17.16■□□□□ 0.34
LMNA-210ENST00000469565 USP44Q9H0E7 712 aa17.16■□□□□ 0.34
LMNA-210ENST00000469565 H0YIN7 160 aa17.15■□□□□ 0.34
LMNA-210ENST00000469565 PDE8AO60658 829 aa17.15■□□□□ 0.34
LMNA-210ENST00000469565 UBTFL1P0CB47 393 aaPredicted RBP17.15■□□□□ 0.34
LMNA-210ENST00000469565 CHRNA5P30532 468 aa17.15■□□□□ 0.34
LMNA-210ENST00000469565 C2CD5Q86YS7 1000 aa17.15■□□□□ 0.34
LMNA-210ENST00000469565 MEIS3Q99687 375 aa17.15■□□□□ 0.34
LMNA-210ENST00000469565 CDHR2Q9BYE9 1310 aa17.15■□□□□ 0.34
LMNA-210ENST00000469565 LAMB2P55268 1798 aa17.15■□□□□ 0.34
LMNA-210ENST00000469565 BRCA1P38398 1863 aaKnown RBP17.14■□□□□ 0.33
LMNA-210ENST00000469565 CASP7P55210 303 aa17.14■□□□□ 0.33
LMNA-210ENST00000469565 ZNF622Q969S3 477 aaKnown RBP eCLIP17.14■□□□□ 0.331e-14■□□□□ 8.4
LMNA-210ENST00000469565 CCDC85AQ96PX6 553 aaPredicted RBP17.14■□□□□ 0.33
LMNA-210ENST00000469565 RRAGCQ9HB90 399 aa17.14■□□□□ 0.33
LMNA-210ENST00000469565 PIM2Q9P1W9 311 aa17.14■□□□□ 0.33
LMNA-210ENST00000469565 CACNA1SQ13698 1873 aa17.14■□□□□ 0.33
LMNA-210ENST00000469565 TNRC6CQ9HCJ0 1690 aaKnown RBP17.13■□□□□ 0.33
LMNA-210ENST00000469565 ARFGEF1Q9Y6D6 1849 aa17.13■□□□□ 0.33
LMNA-210ENST00000469565 GNAI3P08754 354 aa17.13■□□□□ 0.33
LMNA-210ENST00000469565 KCNA3P22001 575 aa17.13■□□□□ 0.33
LMNA-210ENST00000469565 MVPQ14764 893 aaKnown RBP17.13■□□□□ 0.33
LMNA-210ENST00000469565 C3orf67Q6ZVT6 689 aa17.13■□□□□ 0.33
LMNA-210ENST00000469565 RPGRQ92834 1020 aaKnown RBP17.13■□□□□ 0.33
LMNA-210ENST00000469565 SUCLG2Q96I99 432 aa17.13■□□□□ 0.33
LMNA-210ENST00000469565 CHMP3Q9Y3E7 222 aa17.13■□□□□ 0.33
LMNA-210ENST00000469565 TAF1P21675 1872 aa17.12■□□□□ 0.33
LMNA-210ENST00000469565 DALRD3Q5D0E6 543 aaKnown RBP17.12■□□□□ 0.33
LMNA-210ENST00000469565 RNF181Q9P0P0 153 aa17.12■□□□□ 0.33
LMNA-210ENST00000469565 UTYO14607 1347 aa17.12■□□□□ 0.33
LMNA-210ENST00000469565 CTSWP56202 376 aa17.11■□□□□ 0.33
LMNA-210ENST00000469565 SMC1BQ8NDV3 1235 aa17.11■□□□□ 0.33
LMNA-210ENST00000469565 DDX19BQ9UMR2 479 aa17.11■□□□□ 0.33
LMNA-210ENST00000469565 PDZRN3Q9UPQ7 1066 aa17.11■□□□□ 0.33
LMNA-210ENST00000469565 HDAC5Q9UQL6 1122 aa17.11■□□□□ 0.33
LMNA-210ENST00000469565 LRRFIP2Q9Y608 721 aaKnown RBP17.11■□□□□ 0.33
LMNA-210ENST00000469565 SRGNP10124 158 aa17.1■□□□□ 0.33
LMNA-210ENST00000469565 IRX6P78412 446 aaPredicted RBP17.1■□□□□ 0.33
LMNA-210ENST00000469565 CCDC152Q4G0S7 254 aa17.1■□□□□ 0.33
LMNA-210ENST00000469565 EPHA10Q5JZY3 1008 aa17.1■□□□□ 0.33
LMNA-210ENST00000469565 MASTLQ96GX5 879 aa17.1■□□□□ 0.33
LMNA-210ENST00000469565 RBM17Q96I25 401 aaKnown RBP17.1■□□□□ 0.33
LMNA-210ENST00000469565 PLA2G12BQ9BX93 195 aa17.1■□□□□ 0.33
LMNA-210ENST00000469565 COL11A2P13942 1736 aaPredicted RBP17.1■□□□□ 0.33
LMNA-210ENST00000469565 ZBTB7BO15156 539 aaPredicted RBP17.09■□□□□ 0.33
LMNA-210ENST00000469565 NPR1P16066 1061 aa17.09■□□□□ 0.33
LMNA-210ENST00000469565 FOXO4P98177 505 aa17.09■□□□□ 0.33
LMNA-210ENST00000469565 SF3B3Q15393 1217 aaKnown RBP17.09■□□□□ 0.33
LMNA-210ENST00000469565 LMBR1LQ6UX01 489 aa17.09■□□□□ 0.33
LMNA-210ENST00000469565 DDX46Q7L014 1031 aaKnown RBP17.09■□□□□ 0.33
LMNA-210ENST00000469565 TTLL11Q8NHH1 800 aa17.09■□□□□ 0.33
LMNA-210ENST00000469565 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
LMNA-210ENST00000469565 CHMP4BQ9H444 224 aaKnown RBP17.09■□□□□ 0.33
LMNA-210ENST00000469565 BICC1Q9H694 974 aaKnown RBP17.09■□□□□ 0.33
LMNA-210ENST00000469565 C1orf115Q9H7X2 142 aa17.09■□□□□ 0.33
LMNA-210ENST00000469565 RIC1Q4ADV7 1423 aa17.09■□□□□ 0.33
LMNA-210ENST00000469565 KLRG2A4D1S0 409 aaPredicted RBP17.08■□□□□ 0.32
LMNA-210ENST00000469565 GNAI2P04899 355 aa17.08■□□□□ 0.32
LMNA-210ENST00000469565 ALDH1B1P30837 517 aa17.07■□□□□ 0.32
LMNA-210ENST00000469565 CRY2Q49AN0 593 aa17.07■□□□□ 0.32
LMNA-210ENST00000469565 STYK1Q6J9G0 422 aa17.07■□□□□ 0.32
LMNA-210ENST00000469565 KAZALD1Q96I82 304 aa17.07■□□□□ 0.32
LMNA-210ENST00000469565 GREM2Q9H772 168 aa17.07■□□□□ 0.32
LMNA-210ENST00000469565 SEC31BQ9NQW1 1179 aa17.07■□□□□ 0.32
LMNA-210ENST00000469565 PCNTO95613 3336 aa17.07■□□□□ 0.32
LMNA-210ENST00000469565 DLEC1Q9Y238 1755 aa17.07■□□□□ 0.32
LMNA-210ENST00000469565 FAM161AQ3B820 660 aa17.06■□□□□ 0.32
LMNA-210ENST00000469565 TTLL6Q8N841 843 aa17.06■□□□□ 0.32
LMNA-210ENST00000469565 CNKSR1Q969H4 720 aa17.06■□□□□ 0.32
LMNA-210ENST00000469565 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
LMNA-210ENST00000469565 SBF1O95248 1867 aa17.05■□□□□ 0.32
LMNA-210ENST00000469565 SLX4Q8IY92 1834 aa17.05■□□□□ 0.32
LMNA-210ENST00000469565 SPEF2Q9C093 1822 aa17.05■□□□□ 0.32
LMNA-210ENST00000469565 CSF1RP07333 972 aa17.05■□□□□ 0.32
LMNA-210ENST00000469565 HSPA1AP0DMV8 641 aaKnown RBP17.05■□□□□ 0.32
LMNA-210ENST00000469565 HSPA1BP0DMV9 641 aaKnown RBP17.05■□□□□ 0.32
LMNA-210ENST00000469565 ITGA6P23229 1130 aa17.05■□□□□ 0.32
LMNA-210ENST00000469565 IFIT5Q13325 482 aaKnown RBP17.05■□□□□ 0.32
LMNA-210ENST00000469565 TAF7LQ5H9L4 462 aa17.05■□□□□ 0.32
LMNA-210ENST00000469565 CRAMP1Q96RY5 1269 aa17.05■□□□□ 0.32
LMNA-210ENST00000469565 ZC3H4Q9UPT8 1303 aaKnown RBP17.04■□□□□ 0.32
LMNA-210ENST00000469565 ANKRD18BA2A2Z9 1011 aa17.04■□□□□ 0.32
LMNA-210ENST00000469565 CCDC57Q2TAC2 916 aa17.04■□□□□ 0.32
LMNA-210ENST00000469565 ANKRD44Q8N8A2 993 aa17.04■□□□□ 0.32
LMNA-210ENST00000469565 CDC5LQ99459 802 aaKnown RBP17.04■□□□□ 0.32
LMNA-210ENST00000469565 VEGFAP15692 232 aaPredicted RBP17.03■□□□□ 0.32
LMNA-210ENST00000469565 HOXA10P31260 410 aaPredicted RBP17.03■□□□□ 0.32
LMNA-210ENST00000469565 GRAPQ13588 217 aa17.03■□□□□ 0.32
LMNA-210ENST00000469565 PRPF40BQ6NWY9 871 aaKnown RBP17.03■□□□□ 0.32
LMNA-210ENST00000469565 ANKRD18AQ8IVF6 992 aa17.03■□□□□ 0.32
LMNA-210ENST00000469565 GRAPLQ8TC17 118 aaPredicted RBP17.03■□□□□ 0.32
LMNA-210ENST00000469565 CELF1Q92879 486 aaKnown RBP17.03■□□□□ 0.32
LMNA-210ENST00000469565 ZBTB40Q9NUA8 1239 aa17.03■□□□□ 0.32
LMNA-210ENST00000469565 PPEF1O14829 653 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms