RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 BBOX1O75936 387 aa13.38□□□□□ -0.27
SSR3-205ENST00000467789 HSP90B1P14625 803 aaKnown RBP13.38□□□□□ -0.27
SSR3-205ENST00000467789 IARSP41252 1262 aaKnown RBP13.38□□□□□ -0.27
SSR3-205ENST00000467789 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
SSR3-205ENST00000467789 CCDC184Q52MB2 194 aa13.38□□□□□ -0.27
SSR3-205ENST00000467789 CCDC30Q5VVM6 783 aa13.38□□□□□ -0.27
SSR3-205ENST00000467789 SYNE4Q8N205 404 aa13.38□□□□□ -0.27
SSR3-205ENST00000467789 L3MBTL3Q96JM7 780 aaPredicted RBP13.38□□□□□ -0.27
SSR3-205ENST00000467789 ISCA1Q9BUE6 129 aa13.38□□□□□ -0.27
SSR3-205ENST00000467789 VPS33BQ9H267 617 aa13.38□□□□□ -0.27
SSR3-205ENST00000467789 POTECB2RU33 542 aa13.37□□□□□ -0.27
SSR3-205ENST00000467789 TMC4Q7Z404 712 aa13.37□□□□□ -0.27
SSR3-205ENST00000467789 WWC1Q8IX03 1113 aa13.37□□□□□ -0.27
SSR3-205ENST00000467789 JDP2Q8WYK2 163 aa13.37□□□□□ -0.27
SSR3-205ENST00000467789 ZNF277Q9NRM2 450 aaPredicted RBP13.37□□□□□ -0.27
SSR3-205ENST00000467789 FZD9O00144 591 aa13.36□□□□□ -0.27
SSR3-205ENST00000467789 DDNO94850 711 aaPredicted RBP13.36□□□□□ -0.27
SSR3-205ENST00000467789 DDX58O95786 925 aaKnown RBP13.36□□□□□ -0.27
SSR3-205ENST00000467789 OLFM4Q6UX06 510 aa13.36□□□□□ -0.27
SSR3-205ENST00000467789 DDX46Q7L014 1031 aaKnown RBP13.36□□□□□ -0.27
SSR3-205ENST00000467789 RIC3Q7Z5B4 369 aa13.36□□□□□ -0.27
SSR3-205ENST00000467789 SUPT20HQ8NEM7 779 aa13.36□□□□□ -0.27
SSR3-205ENST00000467789 ATP6V0A2Q9Y487 856 aa13.36□□□□□ -0.27
SSR3-205ENST00000467789 ABCC4O15439 1325 aa13.36□□□□□ -0.27
SSR3-205ENST00000467789 ELL2O00472 640 aaPredicted RBP13.35□□□□□ -0.27
SSR3-205ENST00000467789 DCAF8Q5TAQ9 597 aa13.35□□□□□ -0.27
SSR3-205ENST00000467789 C3orf67Q6ZVT6 689 aa13.35□□□□□ -0.27
SSR3-205ENST00000467789 RASEFQ8IZ41 740 aa13.35□□□□□ -0.27
SSR3-205ENST00000467789 GPC2Q8N158 579 aa13.35□□□□□ -0.27
SSR3-205ENST00000467789 C8orf58Q8NAV2 365 aa13.35□□□□□ -0.27
SSR3-205ENST00000467789 DDX60Q8IY21 1712 aaKnown RBP13.35□□□□□ -0.27
SSR3-205ENST00000467789 C19orf67A6NJJ6 358 aa13.34□□□□□ -0.27
SSR3-205ENST00000467789 HCLS1P14317 486 aaPredicted RBP13.34□□□□□ -0.27
SSR3-205ENST00000467789 GRAPQ13588 217 aa13.34□□□□□ -0.27
SSR3-205ENST00000467789 SF3B3Q15393 1217 aaKnown RBP13.34□□□□□ -0.27
SSR3-205ENST00000467789 WDR63Q8IWG1 891 aa13.34□□□□□ -0.27
SSR3-205ENST00000467789 SP8Q8IXZ3 490 aa13.34□□□□□ -0.27
SSR3-205ENST00000467789 GRAPLQ8TC17 118 aaPredicted RBP13.34□□□□□ -0.27
SSR3-205ENST00000467789 STK31Q9BXU1 1019 aa13.34□□□□□ -0.27
SSR3-205ENST00000467789 CACNA1FO60840 1977 aa13.34□□□□□ -0.27
SSR3-205ENST00000467789 CD44P16070 742 aaKnown RBP13.33□□□□□ -0.28
SSR3-205ENST00000467789 EIF6P56537 245 aaKnown RBP13.33□□□□□ -0.28
SSR3-205ENST00000467789 LARGE2Q8N3Y3 721 aa13.33□□□□□ -0.28
SSR3-205ENST00000467789 CCDC191Q8NCU4 936 aa13.33□□□□□ -0.28
SSR3-205ENST00000467789 FAM89AQ96GI7 184 aa13.33□□□□□ -0.28
SSR3-205ENST00000467789 RTFDC1Q9BY42 306 aaPredicted RBP13.33□□□□□ -0.28
SSR3-205ENST00000467789 PHAXQ9H814 394 aaKnown RBP13.33□□□□□ -0.28
SSR3-205ENST00000467789 ATP5J2-PTCD1G3V325 749 aa13.32□□□□□ -0.28
SSR3-205ENST00000467789 TWISTNBQ3B726 338 aaPredicted RBP13.32□□□□□ -0.28
SSR3-205ENST00000467789 PNMA8AQ86V59 439 aaPredicted RBP13.32□□□□□ -0.28
SSR3-205ENST00000467789 DNAJC5GQ8N7S2 189 aa13.32□□□□□ -0.28
SSR3-205ENST00000467789 ZBTB38Q8NAP3 1195 aaPredicted RBP13.32□□□□□ -0.28
SSR3-205ENST00000467789 TSR2Q969E8 191 aaKnown RBP13.32□□□□□ -0.28
SSR3-205ENST00000467789 HACL1Q9UJ83 578 aa13.32□□□□□ -0.28
SSR3-205ENST00000467789 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
SSR3-205ENST00000467789 LRRC37AA6NMS7 1700 aa13.32□□□□□ -0.28
SSR3-205ENST00000467789 ZNF541Q9H0D2 1346 aa13.32□□□□□ -0.28
SSR3-205ENST00000467789 HAX1O00165 279 aa13.31□□□□□ -0.28
SSR3-205ENST00000467789 IRS4O14654 1257 aaPredicted RBP13.31□□□□□ -0.28
SSR3-205ENST00000467789 TCERG1O14776 1098 aaKnown RBP13.31□□□□□ -0.28
SSR3-205ENST00000467789 DPP8Q6V1X1 898 aaPredicted RBP13.31□□□□□ -0.28
SSR3-205ENST00000467789 KSR2Q6VAB6 950 aa13.31□□□□□ -0.28
SSR3-205ENST00000467789 LDHDQ86WU2 507 aa13.31□□□□□ -0.28
SSR3-205ENST00000467789 NIM1KQ8IY84 436 aa13.31□□□□□ -0.28
SSR3-205ENST00000467789 MPNDQ8N594 471 aa13.31□□□□□ -0.28
SSR3-205ENST00000467789 TSPYL6Q8N831 410 aa13.31□□□□□ -0.28
SSR3-205ENST00000467789 METTL22Q9BUU2 404 aaPredicted RBP13.31□□□□□ -0.28
SSR3-205ENST00000467789 TAF1DQ9H5J8 278 aaPredicted RBP13.31□□□□□ -0.28
SSR3-205ENST00000467789 PPIP5K2O43314 1243 aa13.3□□□□□ -0.28
SSR3-205ENST00000467789 PCCAP05165 728 aaPredicted RBP13.3□□□□□ -0.28
SSR3-205ENST00000467789 NEXNQ0ZGT2 675 aa13.3□□□□□ -0.28
SSR3-205ENST00000467789 MYD88Q99836 296 aa13.3□□□□□ -0.28
SSR3-205ENST00000467789 CWC25Q9NXE8 425 aaPredicted RBP13.3□□□□□ -0.28
SSR3-205ENST00000467789 KIAA2012Q0VF49 1180 aa13.29□□□□□ -0.28
SSR3-205ENST00000467789 KLRG1Q96E93 195 aa13.29□□□□□ -0.28
SSR3-205ENST00000467789 COL4A5P29400 1685 aa13.28□□□□□ -0.28
SSR3-205ENST00000467789 TAF1P21675 1872 aa13.28□□□□□ -0.28
SSR3-205ENST00000467789 PI4KAP2A4QPH2 592 aa13.28□□□□□ -0.28
SSR3-205ENST00000467789 PDE8AO60658 829 aa13.28□□□□□ -0.28
SSR3-205ENST00000467789 LMOD1P29536 600 aaPredicted RBP13.28□□□□□ -0.28
SSR3-205ENST00000467789 EPHX2P34913 555 aa13.28□□□□□ -0.28
SSR3-205ENST00000467789 PI4KAP1Q8N8J0 262 aa13.28□□□□□ -0.28
SSR3-205ENST00000467789 TSPYL2Q9H2G4 693 aaPredicted RBP13.28□□□□□ -0.28
SSR3-205ENST00000467789 ZNRF3Q9ULT6 936 aa13.28□□□□□ -0.28
SSR3-205ENST00000467789 MAP3K2Q9Y2U5 619 aa13.28□□□□□ -0.28
SSR3-205ENST00000467789 CDHR2Q9BYE9 1310 aa13.28□□□□□ -0.28
SSR3-205ENST00000467789 FANCIQ9NVI1 1328 aa13.28□□□□□ -0.28
SSR3-205ENST00000467789 ADAMTSL1Q8N6G6 1762 aa13.27□□□□□ -0.28
SSR3-205ENST00000467789 RPS8P62241 208 aaKnown RBP13.27□□□□□ -0.29
SSR3-205ENST00000467789 AOC3Q16853 763 aa13.27□□□□□ -0.29
SSR3-205ENST00000467789 CCDC152Q4G0S7 254 aa13.27□□□□□ -0.29
SSR3-205ENST00000467789 RTL5Q5HYW3 569 aaPredicted RBP13.27□□□□□ -0.29
SSR3-205ENST00000467789 JMYQ8N9B5 988 aa13.27□□□□□ -0.29
SSR3-205ENST00000467789 MYH16Q9H6N6 1097 aa13.27□□□□□ -0.29
SSR3-205ENST00000467789 MYH3P11055 1940 aa13.26□□□□□ -0.29
SSR3-205ENST00000467789 FAM9BQ8IZU0 186 aa13.26□□□□□ -0.29
SSR3-205ENST00000467789 CELF1Q92879 486 aaKnown RBP13.26□□□□□ -0.29
SSR3-205ENST00000467789 GJA3Q9Y6H8 435 aa13.26□□□□□ -0.29
SSR3-205ENST00000467789 DUOX1Q9NRD9 1551 aa13.25□□□□□ -0.29
SSR3-205ENST00000467789 POTEIP0CG38 1075 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms