RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 HLFQ16534 295 aa24.51■■□□□ 1.51
USP11-205ENST00000467378 CLEC4GQ6UXB4 293 aa24.51■■□□□ 1.51
USP11-205ENST00000467378 KIF6Q6ZMV9 814 aa24.51■■□□□ 1.51
USP11-205ENST00000467378 JDP2Q8WYK2 163 aa24.51■■□□□ 1.51
USP11-205ENST00000467378 STK31Q9BXU1 1019 aa24.51■■□□□ 1.51
USP11-205ENST00000467378 LTBP1Q14766 1721 aa24.5■■□□□ 1.51
USP11-205ENST00000467378 LMOD1P29536 600 aaPredicted RBP24.5■■□□□ 1.51
USP11-205ENST00000467378 SLC4A2P04920 1241 aa24.49■■□□□ 1.51
USP11-205ENST00000467378 ZBTB3Q9H5J0 574 aa24.49■■□□□ 1.51
USP11-205ENST00000467378 EIF6P56537 245 aaKnown RBP24.48■■□□□ 1.51
USP11-205ENST00000467378 ANKRD36CQ5JPF3 1778 aa24.48■■□□□ 1.51
USP11-205ENST00000467378 TPTE2Q6XPS3 522 aa24.48■■□□□ 1.51
USP11-205ENST00000467378 ZNF652Q9Y2D9 606 aa24.48■■□□□ 1.51
USP11-205ENST00000467378 KLRG2A4D1S0 409 aaPredicted RBP24.47■■□□□ 1.51
USP11-205ENST00000467378 FAM177BA6PVY3 158 aa24.47■■□□□ 1.51
USP11-205ENST00000467378 ALDH1B1P30837 517 aa24.47■■□□□ 1.51
USP11-205ENST00000467378 CT47B1P0C2W7 299 aaPredicted RBP24.46■■□□□ 1.51
USP11-205ENST00000467378 GIGYF2Q6Y7W6 1299 aaKnown RBP24.46■■□□□ 1.51
USP11-205ENST00000467378 ANKRD13DQ6ZTN6 518 aa24.46■■□□□ 1.51
USP11-205ENST00000467378 G2E3Q7L622 706 aa24.46■■□□□ 1.51
USP11-205ENST00000467378 ZNF428Q96B54 188 aa24.46■■□□□ 1.51
USP11-205ENST00000467378 AOC2O75106 756 aa24.45■■□□□ 1.5
USP11-205ENST00000467378 PLBD2Q8NHP8 589 aa24.45■■□□□ 1.5
USP11-205ENST00000467378 MCOLN1Q9GZU1 580 aa24.45■■□□□ 1.5
USP11-205ENST00000467378 TRAF5O00463 557 aa24.44■■□□□ 1.5
USP11-205ENST00000467378 NIP7Q9Y221 180 aaKnown RBP eCLIP24.44■■□□□ 1.5
USP11-205ENST00000467378 MAP2K2P36507 400 aa24.43■■□□□ 1.5
USP11-205ENST00000467378 EPS15P42566 896 aa24.43■■□□□ 1.5
USP11-205ENST00000467378 CST9Q5W186 159 aa24.43■■□□□ 1.5
USP11-205ENST00000467378 PSMD1Q99460 953 aa24.43■■□□□ 1.5
USP11-205ENST00000467378 TLL2Q9Y6L7 1015 aa24.43■■□□□ 1.5
USP11-205ENST00000467378 GTF2E1P29083 439 aaPredicted RBP24.42■■□□□ 1.5
USP11-205ENST00000467378 ZNF34Q8IZ26 560 aa24.42■■□□□ 1.5
USP11-205ENST00000467378 COL4A5P29400 1685 aa24.42■■□□□ 1.5
USP11-205ENST00000467378 PDE4DIPQ5VU43 2346 aa24.41■■□□□ 1.5
USP11-205ENST00000467378 ALDH1L2Q3SY69 923 aa24.41■■□□□ 1.5
USP11-205ENST00000467378 MRPL50Q8N5N7 158 aaKnown RBP24.41■■□□□ 1.5
USP11-205ENST00000467378 SSH1Q8WYL5 1049 aa24.41■■□□□ 1.5
USP11-205ENST00000467378 YTHDC1Q96MU7 727 aaKnown RBP24.41■■□□□ 1.5
USP11-205ENST00000467378 SCNN1DP51172 638 aa24.4■■□□□ 1.5
USP11-205ENST00000467378 FLIIQ13045 1269 aa24.4■■□□□ 1.5
USP11-205ENST00000467378 TCIRG1Q13488 830 aa24.4■■□□□ 1.5
USP11-205ENST00000467378 USP50Q70EL3 339 aaPredicted RBP24.4■■□□□ 1.5
USP11-205ENST00000467378 CA12O43570 354 aa24.39■■□□□ 1.49
USP11-205ENST00000467378 DDX58O95786 925 aaKnown RBP24.39■■□□□ 1.49
USP11-205ENST00000467378 DGKZQ13574 1117 aa24.39■■□□□ 1.49
USP11-205ENST00000467378 KSR2Q6VAB6 950 aa24.39■■□□□ 1.49
USP11-205ENST00000467378 RIC3Q7Z5B4 369 aa24.39■■□□□ 1.49
USP11-205ENST00000467378 LARGE2Q8N3Y3 721 aa24.39■■□□□ 1.49
USP11-205ENST00000467378 SNED1Q8TER0 1413 aa24.38■■□□□ 1.49
USP11-205ENST00000467378 HSP90AB3PQ58FF7 597 aa24.38■■□□□ 1.49
USP11-205ENST00000467378 UBN2Q6ZU65 1347 aa24.37■■□□□ 1.49
USP11-205ENST00000467378 PI4KAP2A4QPH2 592 aa24.37■■□□□ 1.49
USP11-205ENST00000467378 GPTP24298 496 aa24.37■■□□□ 1.49
USP11-205ENST00000467378 RARSP54136 660 aaKnown RBP24.37■■□□□ 1.49
USP11-205ENST00000467378 CC2D2BQ6DHV5 1058 aa24.37■■□□□ 1.49
USP11-205ENST00000467378 PI4KAP1Q8N8J0 262 aa24.37■■□□□ 1.49
USP11-205ENST00000467378 BCL2L13Q9BXK5 485 aa24.36■■□□□ 1.49
USP11-205ENST00000467378 MAP3K2Q9Y2U5 619 aa24.36■■□□□ 1.49
USP11-205ENST00000467378 FKBP5Q13451 457 aaPredicted RBP24.35■■□□□ 1.49
USP11-205ENST00000467378 ISCA1Q9BUE6 129 aa24.35■■□□□ 1.49
USP11-205ENST00000467378 METTL22Q9BUU2 404 aaPredicted RBP24.35■■□□□ 1.49
USP11-205ENST00000467378 CELF2O95319 508 aaKnown RBP24.34■■□□□ 1.49
USP11-205ENST00000467378 BRPF1P55201 1214 aaPredicted RBP24.34■■□□□ 1.49
USP11-205ENST00000467378 SUSD4Q5VX71 490 aa24.34■■□□□ 1.49
USP11-205ENST00000467378 SAPCD2Q86UD0 394 aa24.34■■□□□ 1.49
USP11-205ENST00000467378 SMC4Q9NTJ3 1288 aa24.34■■□□□ 1.49
USP11-205ENST00000467378 PARP10Q53GL7 1025 aa24.33■■□□□ 1.49
USP11-205ENST00000467378 NLRP10Q86W26 655 aa24.33■■□□□ 1.49
USP11-205ENST00000467378 NIM1KQ8IY84 436 aa24.33■■□□□ 1.49
USP11-205ENST00000467378 MYD88Q99836 296 aa24.33■■□□□ 1.49
USP11-205ENST00000467378 TNRC18O15417 2968 aaPredicted RBP24.33■■□□□ 1.48
USP11-205ENST00000467378 ATP5J2-PTCD1G3V325 749 aa24.32■■□□□ 1.48
USP11-205ENST00000467378 TRIM28Q13263 835 aaKnown RBP24.32■■□□□ 1.48
USP11-205ENST00000467378 NUTM1Q86Y26 1132 aa24.32■■□□□ 1.48
USP11-205ENST00000467378 RPGRQ92834 1020 aaKnown RBP24.32■■□□□ 1.48
USP11-205ENST00000467378 ADARB2Q9NS39 739 aaKnown RBP24.32■■□□□ 1.48
USP11-205ENST00000467378 ABCC12Q96J65 1359 aa24.31■■□□□ 1.48
USP11-205ENST00000467378 IBTKQ9P2D0 1353 aaPredicted RBP24.31■■□□□ 1.48
USP11-205ENST00000467378 CRY2Q49AN0 593 aa24.31■■□□□ 1.48
USP11-205ENST00000467378 CIAPIN1Q6FI81 312 aa24.31■■□□□ 1.48
USP11-205ENST00000467378 NYXQ9GZU5 481 aa24.31■■□□□ 1.48
USP11-205ENST00000467378 ZNF408Q9H9D4 720 aa24.31■■□□□ 1.48
USP11-205ENST00000467378 NTSR2O95665 410 aa24.3■■□□□ 1.48
USP11-205ENST00000467378 GRIPAP1Q4V328 841 aa24.3■■□□□ 1.48
USP11-205ENST00000467378 PPP1R42Q7Z4L9 355 aa24.3■■□□□ 1.48
USP11-205ENST00000467378 DNAAF4Q8WXU2 420 aa24.3■■□□□ 1.48
USP11-205ENST00000467378 GLIS2Q9BZE0 524 aaPredicted RBP24.3■■□□□ 1.48
USP11-205ENST00000467378 GPRC5DQ9NZD1 345 aa24.3■■□□□ 1.48
USP11-205ENST00000467378 PTPRCP08575 1304 aa24.3■■□□□ 1.48
USP11-205ENST00000467378 F6X3S4 739 aa24.29■■□□□ 1.48
USP11-205ENST00000467378 HHIPL1Q96JK4 782 aa24.29■■□□□ 1.48
USP11-205ENST00000467378 PPIP5K2O43314 1243 aa24.28■■□□□ 1.48
USP11-205ENST00000467378 BCAR3O75815 825 aa24.28■■□□□ 1.48
USP11-205ENST00000467378 IGKV5-2P06315 115 aa24.28■■□□□ 1.48
USP11-205ENST00000467378 UTP14AQ9BVJ6 771 aaKnown RBP24.28■■□□□ 1.48
USP11-205ENST00000467378 NOB1Q9ULX3 412 aaKnown RBP24.27■■□□□ 1.48
USP11-205ENST00000467378 PPEF1O14829 653 aaPredicted RBP24.26■■□□□ 1.47
USP11-205ENST00000467378 HOXA10P31260 410 aaPredicted RBP24.26■■□□□ 1.47
USP11-205ENST00000467378 NEXNQ0ZGT2 675 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms