RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 JARID2Q92833 1246 aaPredicted RBP20.45■□□□□ 0.86
HLA-C-205ENST00000466892 RBM17Q96I25 401 aaKnown RBP20.45■□□□□ 0.86
HLA-C-205ENST00000466892 KAZALD1Q96I82 304 aa20.45■□□□□ 0.86
HLA-C-205ENST00000466892 CRAMP1Q96RY5 1269 aa20.45■□□□□ 0.86
HLA-C-205ENST00000466892 CNKSR1Q969H4 720 aa20.44■□□□□ 0.86
HLA-C-205ENST00000466892 SYT17Q9BSW7 474 aa20.44■□□□□ 0.86
HLA-C-205ENST00000466892 BICC1Q9H694 974 aaKnown RBP20.44■□□□□ 0.86
HLA-C-205ENST00000466892 LRRFIP2Q9Y608 721 aaKnown RBP20.44■□□□□ 0.86
HLA-C-205ENST00000466892 TNRC6CQ9HCJ0 1690 aaKnown RBP20.43■□□□□ 0.86
HLA-C-205ENST00000466892 DDX46Q7L014 1031 aaKnown RBP20.43■□□□□ 0.86
HLA-C-205ENST00000466892 TMC4Q7Z404 712 aa20.43■□□□□ 0.86
HLA-C-205ENST00000466892 DDX60Q8IY21 1712 aaKnown RBP20.43■□□□□ 0.86
HLA-C-205ENST00000466892 LMBR1LQ6UX01 489 aa20.42■□□□□ 0.86
HLA-C-205ENST00000466892 C3orf67Q6ZVT6 689 aa20.42■□□□□ 0.86
HLA-C-205ENST00000466892 KLHL34Q8N239 644 aa20.42■□□□□ 0.86
HLA-C-205ENST00000466892 ANKRD44Q8N8A2 993 aa20.42■□□□□ 0.86
HLA-C-205ENST00000466892 CDC5LQ99459 802 aaKnown RBP20.42■□□□□ 0.86
HLA-C-205ENST00000466892 DPEP1P16444 411 aa20.41■□□□□ 0.86
HLA-C-205ENST00000466892 KCNA3P22001 575 aa20.41■□□□□ 0.86
HLA-C-205ENST00000466892 IFIT5Q13325 482 aaKnown RBP20.41■□□□□ 0.86
HLA-C-205ENST00000466892 EPHA10Q5JZY3 1008 aa20.41■□□□□ 0.86
HLA-C-205ENST00000466892 PIM2Q9P1W9 311 aa20.41■□□□□ 0.86
HLA-C-205ENST00000466892 ANKRD31Q8N7Z5 1873 aa20.41■□□□□ 0.86
HLA-C-205ENST00000466892 BBOX1O75936 387 aa20.4■□□□□ 0.86
HLA-C-205ENST00000466892 CHRNA5P30532 468 aa20.4■□□□□ 0.86
HLA-C-205ENST00000466892 GRAPQ13588 217 aa20.4■□□□□ 0.86
HLA-C-205ENST00000466892 CCDC57Q2TAC2 916 aa20.4■□□□□ 0.86
HLA-C-205ENST00000466892 RPAP2Q8IXW5 612 aaPredicted RBP20.4■□□□□ 0.86
HLA-C-205ENST00000466892 GRAPLQ8TC17 118 aaPredicted RBP20.4■□□□□ 0.86
HLA-C-205ENST00000466892 CRBNQ96SW2 442 aa20.4■□□□□ 0.86
HLA-C-205ENST00000466892 GREM2Q9H772 168 aa20.4■□□□□ 0.86
HLA-C-205ENST00000466892 A0A0G2JLW4 131 aa20.39■□□□□ 0.85
HLA-C-205ENST00000466892 ANKRD18BA2A2Z9 1011 aa20.39■□□□□ 0.85
HLA-C-205ENST00000466892 TTLL6Q8N841 843 aa20.39■□□□□ 0.85
HLA-C-205ENST00000466892 ITGA6P23229 1130 aa20.38■□□□□ 0.85
HLA-C-205ENST00000466892 FAM161AQ3B820 660 aa20.38■□□□□ 0.85
HLA-C-205ENST00000466892 ZNF622Q969S3 477 aaKnown RBP eCLIP20.38■□□□□ 0.85
HLA-C-205ENST00000466892 FBXO3Q9UK99 471 aa20.38■□□□□ 0.85
HLA-C-205ENST00000466892 KIAA1551Q9HCM1 1747 aa20.37■□□□□ 0.85
HLA-C-205ENST00000466892 GRIPAP1Q4V328 841 aa20.37■□□□□ 0.85
HLA-C-205ENST00000466892 NLGN2Q8NFZ4 835 aa20.37■□□□□ 0.85
HLA-C-205ENST00000466892 CHMP3Q9Y3E7 222 aa20.37■□□□□ 0.85
HLA-C-205ENST00000466892 DLEC1Q9Y238 1755 aa20.36■□□□□ 0.85
HLA-C-205ENST00000466892 SRGAP3O43295 1099 aa20.36■□□□□ 0.85
HLA-C-205ENST00000466892 NEFLP07196 543 aa20.36■□□□□ 0.85
HLA-C-205ENST00000466892 IGHMBP2P38935 993 aaKnown RBP20.36■□□□□ 0.85
HLA-C-205ENST00000466892 RPS8P62241 208 aaKnown RBP20.36■□□□□ 0.85
HLA-C-205ENST00000466892 ATP8B2P98198 1209 aa20.36■□□□□ 0.85
HLA-C-205ENST00000466892 DALRD3Q5D0E6 543 aaKnown RBP20.36■□□□□ 0.85
HLA-C-205ENST00000466892 SOGA3Q5TF21 947 aa20.36■□□□□ 0.85
HLA-C-205ENST00000466892 CC2D2BQ6DHV5 1058 aa20.36■□□□□ 0.85
HLA-C-205ENST00000466892 CEP85Q6P2H3 762 aa20.36■□□□□ 0.85
HLA-C-205ENST00000466892 ANKRD18AQ8IVF6 992 aa20.36■□□□□ 0.85
HLA-C-205ENST00000466892 COL11A2P13942 1736 aaPredicted RBP20.36■□□□□ 0.85
HLA-C-205ENST00000466892 HMMRO75330 724 aa20.35■□□□□ 0.85
HLA-C-205ENST00000466892 PRPF40BQ6NWY9 871 aaKnown RBP20.35■□□□□ 0.85
HLA-C-205ENST00000466892 SSH3Q8TE77 659 aa20.35■□□□□ 0.85
HLA-C-205ENST00000466892 BSDC1Q9NW68 430 aaPredicted RBP20.35■□□□□ 0.85
HLA-C-205ENST00000466892 PPEF1O14829 653 aaPredicted RBP20.34■□□□□ 0.85
HLA-C-205ENST00000466892 POLA2Q14181 598 aa20.34■□□□□ 0.85
HLA-C-205ENST00000466892 TAF7LQ5H9L4 462 aa20.34■□□□□ 0.85
HLA-C-205ENST00000466892 CCDC85AQ96PX6 553 aaPredicted RBP20.34■□□□□ 0.85
HLA-C-205ENST00000466892 TMX4Q9H1E5 349 aaPredicted RBP20.34■□□□□ 0.85
HLA-C-205ENST00000466892 C1orf115Q9H7X2 142 aa20.34■□□□□ 0.85
HLA-C-205ENST00000466892 SEC31BQ9NQW1 1179 aa20.34■□□□□ 0.85
HLA-C-205ENST00000466892 RFX5P48382 616 aaPredicted RBP20.33■□□□□ 0.85
HLA-C-205ENST00000466892 EXOC6Q8TAG9 804 aa20.33■□□□□ 0.85
HLA-C-205ENST00000466892 CELF1Q92879 486 aaKnown RBP20.33■□□□□ 0.85
HLA-C-205ENST00000466892 MPHOSPH8Q99549 860 aa20.33■□□□□ 0.85
HLA-C-205ENST00000466892 COPRSQ9NQ92 184 aa20.33■□□□□ 0.85
HLA-C-205ENST00000466892 ATP6V0A2Q9Y487 856 aa20.33■□□□□ 0.85
HLA-C-205ENST00000466892 MYH3P11055 1940 aa20.32■□□□□ 0.84
HLA-C-205ENST00000466892 ERICH6BQ5W0A0 696 aa20.32■□□□□ 0.84
HLA-C-205ENST00000466892 SP8Q8IXZ3 490 aa20.32■□□□□ 0.84
HLA-C-205ENST00000466892 CIAO1O76071 339 aa20.31■□□□□ 0.84
HLA-C-205ENST00000466892 PTPN12Q05209 780 aaKnown RBP20.31■□□□□ 0.84
HLA-C-205ENST00000466892 C7orf43Q8WVR3 580 aa20.31■□□□□ 0.84
HLA-C-205ENST00000466892 SRCAPQ6ZRS2 3230 aa20.31■□□□□ 0.84
HLA-C-205ENST00000466892 PNMA6EA0A0J9YXQ4 647 aa20.3■□□□□ 0.84
HLA-C-205ENST00000466892 LDHAL6AQ6ZMR3 332 aa20.3■□□□□ 0.84
HLA-C-205ENST00000466892 RTKN2Q8IZC4 609 aa20.29■□□□□ 0.84
HLA-C-205ENST00000466892 BCS1LQ9Y276 419 aa20.29■□□□□ 0.84
HLA-C-205ENST00000466892 MROH5Q6ZUA9 1318 aa20.28■□□□□ 0.84
HLA-C-205ENST00000466892 EYA2O00167 538 aa20.28■□□□□ 0.84
HLA-C-205ENST00000466892 CCDC93Q567U6 631 aa20.28■□□□□ 0.84
HLA-C-205ENST00000466892 HSP90AB4PQ58FF6 505 aa20.28■□□□□ 0.84
HLA-C-205ENST00000466892 ANKRD2Q9GZV1 360 aa20.28■□□□□ 0.84
HLA-C-205ENST00000466892 NOP58Q9Y2X3 529 aaKnown RBP20.28■□□□□ 0.84
HLA-C-205ENST00000466892 IL15P40933 162 aaPredicted RBP20.27■□□□□ 0.84
HLA-C-205ENST00000466892 IRX6P78412 446 aaPredicted RBP20.27■□□□□ 0.84
HLA-C-205ENST00000466892 SIRT2Q8IXJ6 389 aa20.27■□□□□ 0.84
HLA-C-205ENST00000466892 CNNM1Q9NRU3 951 aa20.27■□□□□ 0.84
HLA-C-205ENST00000466892 PODXL2Q9NZ53 605 aa20.27■□□□□ 0.84
HLA-C-205ENST00000466892 BRCA1P38398 1863 aaKnown RBP20.26■□□□□ 0.83
HLA-C-205ENST00000466892 HDAC1Q13547 482 aaPredicted RBP20.26■□□□□ 0.83
HLA-C-205ENST00000466892 ZNF594Q96JF6 807 aaPredicted RBP20.26■□□□□ 0.83
HLA-C-205ENST00000466892 MINPP1Q9UNW1 487 aa20.26■□□□□ 0.83
HLA-C-205ENST00000466892 RIPOR2Q9Y4F9 1068 aa20.26■□□□□ 0.83
HLA-C-205ENST00000466892 PCDHB15Q9Y5E8 787 aa20.26■□□□□ 0.83
HLA-C-205ENST00000466892 C21orf2O43822 256 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms