RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 APAF1O14727 1248 aa23.19■■□□□ 1.3
SSB-206ENST00000461708 SF3B3Q15393 1217 aaKnown RBP23.19■■□□□ 1.3
SSB-206ENST00000461708 AOC3Q16853 763 aa23.19■■□□□ 1.3
SSB-206ENST00000461708 MPNDQ8N594 471 aa23.19■■□□□ 1.3
SSB-206ENST00000461708 MKRN1Q9UHC7 482 aaKnown RBP23.19■■□□□ 1.3
SSB-206ENST00000461708 KIAA2012Q0VF49 1180 aa23.18■■□□□ 1.3
SSB-206ENST00000461708 MAP1SQ66K74 1059 aaPredicted RBP23.18■■□□□ 1.3
SSB-206ENST00000461708 USP50Q70EL3 339 aaPredicted RBP23.18■■□□□ 1.3
SSB-206ENST00000461708 CHMP4AQ9BY43 222 aa23.18■■□□□ 1.3
SSB-206ENST00000461708 DDX60Q8IY21 1712 aaKnown RBP23.18■■□□□ 1.3
SSB-206ENST00000461708 LRRC37AA6NMS7 1700 aa23.17■■□□□ 1.3
SSB-206ENST00000461708 EPS15P42566 896 aa23.17■■□□□ 1.3
SSB-206ENST00000461708 CDHR2Q9BYE9 1310 aa23.16■■□□□ 1.3
SSB-206ENST00000461708 TAF1P21675 1872 aa23.15■■□□□ 1.3
SSB-206ENST00000461708 CXCL9Q07325 125 aa23.15■■□□□ 1.3
SSB-206ENST00000461708 FAM89AQ96GI7 184 aa23.15■■□□□ 1.3
SSB-206ENST00000461708 GPRC5DQ9NZD1 345 aa23.15■■□□□ 1.3
SSB-206ENST00000461708 ATP5J2-PTCD1G3V325 749 aa23.14■■□□□ 1.29
SSB-206ENST00000461708 RASSF10A6NK89 507 aa23.13■■□□□ 1.29
SSB-206ENST00000461708 HSP90B1P14625 803 aaKnown RBP23.13■■□□□ 1.29
SSB-206ENST00000461708 GOLGA2Q08379 1002 aa23.13■■□□□ 1.29
SSB-206ENST00000461708 ADARB2Q9NS39 739 aaKnown RBP23.13■■□□□ 1.29
SSB-206ENST00000461708 VEGFBP49765 207 aa23.12■■□□□ 1.29
SSB-206ENST00000461708 TNIP1Q15025 636 aa23.12■■□□□ 1.29
SSB-206ENST00000461708 RIC3Q7Z5B4 369 aa23.12■■□□□ 1.29
SSB-206ENST00000461708 DUOX1Q9NRD9 1551 aa23.12■■□□□ 1.29
SSB-206ENST00000461708 CIAPIN1Q6FI81 312 aa23.11■■□□□ 1.29
SSB-206ENST00000461708 ZBTB38Q8NAP3 1195 aaPredicted RBP23.11■■□□□ 1.29
SSB-206ENST00000461708 IRS4O14654 1257 aaPredicted RBP23.1■■□□□ 1.29
SSB-206ENST00000461708 TNS4Q8IZW8 715 aa23.1■■□□□ 1.29
SSB-206ENST00000461708 GMPSP49915 693 aaPredicted RBP23.09■■□□□ 1.29
SSB-206ENST00000461708 DEFB115Q30KQ5 88 aa23.09■■□□□ 1.29
SSB-206ENST00000461708 C8orf58Q8NAV2 365 aa23.09■■□□□ 1.29
SSB-206ENST00000461708 CCDC191Q8NCU4 936 aa23.09■■□□□ 1.29
SSB-206ENST00000461708 CELF1Q92879 486 aaKnown RBP23.09■■□□□ 1.29
SSB-206ENST00000461708 PHAXQ9H814 394 aaKnown RBP23.09■■□□□ 1.29
SSB-206ENST00000461708 PGAP2Q9UHJ9 254 aa23.09■■□□□ 1.29
SSB-206ENST00000461708 TRPM7Q96QT4 1865 aa23.09■■□□□ 1.29
SSB-206ENST00000461708 ELL2O00472 640 aaPredicted RBP23.08■■□□□ 1.29
SSB-206ENST00000461708 CCDC27Q2M243 656 aa23.08■■□□□ 1.29
SSB-206ENST00000461708 CCDC30Q5VVM6 783 aa23.08■■□□□ 1.29
SSB-206ENST00000461708 DDX58O95786 925 aaKnown RBP23.07■■□□□ 1.28
SSB-206ENST00000461708 RPS8P62241 208 aaKnown RBP23.07■■□□□ 1.28
SSB-206ENST00000461708 WASHC4Q2M389 1173 aa23.07■■□□□ 1.28
SSB-206ENST00000461708 NCBP3Q53F19 620 aaKnown RBP23.07■■□□□ 1.28
SSB-206ENST00000461708 ZC3H15Q8WU90 426 aaKnown RBP23.07■■□□□ 1.28
SSB-206ENST00000461708 ZNF428Q96B54 188 aa23.07■■□□□ 1.28
SSB-206ENST00000461708 NSFL1CQ9UNZ2 370 aaKnown RBP23.07■■□□□ 1.28
SSB-206ENST00000461708 RAD17O75943 681 aa23.06■■□□□ 1.28
SSB-206ENST00000461708 BCL2L13Q9BXK5 485 aa23.06■■□□□ 1.28
SSB-206ENST00000461708 YDJCA8MPS7 323 aa23.05■■□□□ 1.28
SSB-206ENST00000461708 PCCAP05165 728 aaPredicted RBP23.05■■□□□ 1.28
SSB-206ENST00000461708 RTL5Q5HYW3 569 aaPredicted RBP23.05■■□□□ 1.28
SSB-206ENST00000461708 MYD88Q99836 296 aa23.05■■□□□ 1.28
SSB-206ENST00000461708 METTL22Q9BUU2 404 aaPredicted RBP23.05■■□□□ 1.28
SSB-206ENST00000461708 WBP1LQ9NX94 342 aa23.05■■□□□ 1.28
SSB-206ENST00000461708 ABT1Q9ULW3 272 aaKnown RBP23.05■■□□□ 1.28
SSB-206ENST00000461708 FOXN1O15353 648 aa23.04■■□□□ 1.28
SSB-206ENST00000461708 DPF2Q92785 391 aa23.04■■□□□ 1.28
SSB-206ENST00000461708 AIDAQ96BJ3 306 aa23.04■■□□□ 1.28
SSB-206ENST00000461708 EYA3Q99504 573 aa23.04■■□□□ 1.28
SSB-206ENST00000461708 PRDM10Q9NQV6 1147 aa23.04■■□□□ 1.28
SSB-206ENST00000461708 CWC25Q9NXE8 425 aaPredicted RBP23.04■■□□□ 1.28
SSB-206ENST00000461708 PODXL2Q9NZ53 605 aa23.04■■□□□ 1.28
SSB-206ENST00000461708 WDR33Q9C0J8 1336 aaKnown RBP23.04■■□□□ 1.28
SSB-206ENST00000461708 CTCFP49711 727 aaPredicted RBP23.03■■□□□ 1.28
SSB-206ENST00000461708 GPSM2P81274 684 aa23.03■■□□□ 1.28
SSB-206ENST00000461708 CST9Q5W186 159 aa23.03■■□□□ 1.28
SSB-206ENST00000461708 POLLQ9UGP5 575 aa23.03■■□□□ 1.28
SSB-206ENST00000461708 C6orf229H3BNL8 230 aa23.02■■□□□ 1.28
SSB-206ENST00000461708 H7C1D1 291 aa23.02■■□□□ 1.28
SSB-206ENST00000461708 PDE8AO60658 829 aa23.02■■□□□ 1.28
SSB-206ENST00000461708 CCDC152Q4G0S7 254 aa23.02■■□□□ 1.28
SSB-206ENST00000461708 CNOT7Q9UIV1 285 aaKnown RBP23.02■■□□□ 1.28
SSB-206ENST00000461708 COL4A1P02462 1669 aa23.02■■□□□ 1.28
SSB-206ENST00000461708 TRAF5O00463 557 aa23.01■■□□□ 1.27
SSB-206ENST00000461708 RPS12P25398 132 aaKnown RBP23.01■■□□□ 1.27
SSB-206ENST00000461708 ECE1P42892 770 aa23.01■■□□□ 1.27
SSB-206ENST00000461708 MAP2K1Q02750 393 aaPredicted RBP23.01■■□□□ 1.27
SSB-206ENST00000461708 KSR2Q6VAB6 950 aa23.01■■□□□ 1.27
SSB-206ENST00000461708 TSPYL6Q8N831 410 aa23.01■■□□□ 1.27
SSB-206ENST00000461708 TBC1D16Q8TBP0 767 aa23.01■■□□□ 1.27
SSB-206ENST00000461708 IL16Q14005 1332 aa23.01■■□□□ 1.27
SSB-206ENST00000461708 HIRAP54198 1017 aaPredicted RBP23■■□□□ 1.27
SSB-206ENST00000461708 FMR1Q06787 632 aaKnown RBP eCLIP23■■□□□ 1.277e-13■□□□□ 8.1
SSB-206ENST00000461708 CCDC184Q52MB2 194 aa23■■□□□ 1.27
SSB-206ENST00000461708 WWC1Q8IX03 1113 aa23■■□□□ 1.27
SSB-206ENST00000461708 TLL2Q9Y6L7 1015 aa23■■□□□ 1.27
SSB-206ENST00000461708 THSD7BQ9C0I4 1608 aa23■■□□□ 1.27
SSB-206ENST00000461708 STK31Q9BXU1 1019 aa22.99■■□□□ 1.27
SSB-206ENST00000461708 DBNDD1Q9H9R9 158 aa22.99■■□□□ 1.27
SSB-206ENST00000461708 MAP3K2Q9Y2U5 619 aa22.99■■□□□ 1.27
SSB-206ENST00000461708 PSMD14O00487 310 aa22.98■■□□□ 1.27
SSB-206ENST00000461708 CDC37L1Q7L3B6 337 aa22.98■■□□□ 1.27
SSB-206ENST00000461708 MICALL2Q8IY33 904 aa22.98■■□□□ 1.27
SSB-206ENST00000461708 HHIPL1Q96JK4 782 aa22.98■■□□□ 1.27
SSB-206ENST00000461708 CAPNS2Q96L46 248 aa22.98■■□□□ 1.27
SSB-206ENST00000461708 ZC3H12CQ9C0D7 883 aaKnown RBP22.98■■□□□ 1.27
SSB-206ENST00000461708 SEC31BQ9NQW1 1179 aa22.98■■□□□ 1.27
SSB-206ENST00000461708 PI4KAP2A4QPH2 592 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 351.2 ms