RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 USPL1Q5W0Q7 1092 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 CLEC4GQ6UXB4 293 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 DDX46Q7L014 1031 aaKnown RBP4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 ANKRD18AQ8IVF6 992 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 EAF2Q96CJ1 260 aaPredicted RBP4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 DBNDD2Q9BQY9 259 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 BCL9LQ86UU0 1499 aa4.97□□□□□ -1.61
ATP13A3-206ENST00000461660 PRKCSHP14314 528 aaPredicted RBP4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 PTPN12Q05209 780 aaKnown RBP4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 RABL6Q3YEC7 729 aaPredicted RBP4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 SLC4A9Q96Q91 983 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 ESYT1Q9BSJ8 1104 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 COL22A1Q8NFW1 1626 aaPredicted RBP4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 CDHR2Q9BYE9 1310 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 CNTNAP4Q9C0A0 1308 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 PKD1L3Q7Z443 1732 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 A0A1B0GUL7 405 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 GOLIM4O00461 696 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 CIAO1O76071 339 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 CHMLP26374 656 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 ST5P78524 1137 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 RC3H1Q5TC82 1133 aaKnown RBP4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 INTS5Q6P9B9 1019 aaKnown RBP4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 NOL8Q76FK4 1167 aaKnown RBP4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 LRP10Q7Z4F1 713 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 CNBD1Q8NA66 436 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 LINC00116Q8NCU8 138 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 RPGRQ92834 1020 aaKnown RBP4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 GREM2Q9H772 168 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 G3V3G9 751 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 SASH1O94885 1247 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 UQCRFS1P1P0C7P4 283 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 TIMM10P62072 90 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 DCAF8Q5TAQ9 597 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 SUSD4Q5VX71 490 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 ZSCAN25Q6NSZ9 544 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 SNRKQ9NRH2 765 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 NARFQ9UHQ1 456 aa4.96□□□□□ -1.62
ATP13A3-206ENST00000461660 KDM3BQ7LBC6 1761 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 SCN11AQ9UI33 1791 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 CAMTA2O94983 1202 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 NEK4P51957 841 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 FOXO4P98177 505 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 LRRC24Q50LG9 513 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 SLC27A3Q5K4L6 730 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 KAZALD1Q96I82 304 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 SRP68Q9UHB9 627 aaKnown RBP4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 NAP1L2Q9ULW6 460 aaPredicted RBP4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 ABCA3Q99758 1704 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 IDH1O75874 414 aaKnown RBP4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 APPP05067 770 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 ATP5JP18859 108 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 CAVIN4Q5BKX8 364 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 ZNF34Q8IZ26 560 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 HELBQ8NG08 1087 aaPredicted RBP4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 TTLL11Q8NHH1 800 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 GPR108Q9NPR9 543 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 FOXD4L1Q9NU39 408 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 CACNA1FO60840 1977 aa4.95□□□□□ -1.62
ATP13A3-206ENST00000461660 GOLGA6L22H0YM25 854 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 MCM2P49736 904 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 PUM3Q15397 648 aaKnown RBP4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 SYNE4Q8N205 404 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 PLA2G12BQ9BX93 195 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 PUS3Q9BZE2 481 aaKnown RBP4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 DBNLQ9UJU6 430 aaKnown RBP4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 KCPQ6ZWJ8 1503 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 CRYBG1Q9Y4K1 1723 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 MROH5Q6ZUA9 1318 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 LRP6O75581 1613 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 PSMA5P28066 241 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 TTF1Q15361 905 aaPredicted RBP4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 TXNRD1Q16881 649 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 FLAD1Q8NFF5 587 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 XAGE2Q96GT9 111 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 PAG1Q9NWQ8 432 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 TLR7Q9NYK1 1049 aaKnown RBP4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 RAD50Q92878 1312 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 RBM25P49756 843 aaKnown RBP4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 CASP7P55210 303 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 CCDC24Q8N4L8 307 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 LPIN2Q92539 896 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 ARHGEF1Q92888 912 aaKnown RBP4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 STK32BQ9NY57 414 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 ANKIB1Q9P2G1 1089 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 LRP2BPQ9P2M1 347 aa4.94□□□□□ -1.62
ATP13A3-206ENST00000461660 K7ELQ4 463 aaPredicted RBP4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 ZFYP08048 801 aaPredicted RBP4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 RFX5P48382 616 aaPredicted RBP4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 MAP3K12Q12852 859 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 NMIQ13287 307 aaPredicted RBP4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 ERFEQ4G0M1 354 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 PI4K2BQ8TCG2 481 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 NOL10Q9BSC4 688 aaKnown RBP4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 USP26Q9BXU7 913 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 ATRNO75882 1429 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 PLCH1Q4KWH8 1693 aa4.93□□□□□ -1.62
ATP13A3-206ENST00000461660 SGSM2O43147 1006 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms