RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 ZNF316A6NFI3 1004 aaPredicted RBP22.84■■□□□ 1.25
COL1A2-202ENST00000461525 CCDC27Q2M243 656 aa22.84■■□□□ 1.25
COL1A2-202ENST00000461525 RTL5Q5HYW3 569 aaPredicted RBP22.84■■□□□ 1.25
COL1A2-202ENST00000461525 MRS2Q9HD23 443 aa22.84■■□□□ 1.25
COL1A2-202ENST00000461525 IRS4O14654 1257 aaPredicted RBP22.83■■□□□ 1.25
COL1A2-202ENST00000461525 ANP32CO43423 234 aa22.83■■□□□ 1.25
COL1A2-202ENST00000461525 SF3B3Q15393 1217 aaKnown RBP22.83■■□□□ 1.25
COL1A2-202ENST00000461525 PASKQ96RG2 1323 aa22.82■■□□□ 1.24
COL1A2-202ENST00000461525 DDX58O95786 925 aaKnown RBP22.82■■□□□ 1.24
COL1A2-202ENST00000461525 WWC1Q8IX03 1113 aa22.82■■□□□ 1.24
COL1A2-202ENST00000461525 TSR2Q969E8 191 aaKnown RBP22.82■■□□□ 1.24
COL1A2-202ENST00000461525 MYD88Q99836 296 aa22.82■■□□□ 1.24
COL1A2-202ENST00000461525 ZNRF3Q9ULT6 936 aa22.82■■□□□ 1.24
COL1A2-202ENST00000461525 SCNN1DP51172 638 aa22.81■■□□□ 1.24
COL1A2-202ENST00000461525 KIAA2012Q0VF49 1180 aa22.81■■□□□ 1.24
COL1A2-202ENST00000461525 IFFO2Q5TF58 517 aa22.81■■□□□ 1.24
COL1A2-202ENST00000461525 TSPYL6Q8N831 410 aa22.81■■□□□ 1.24
COL1A2-202ENST00000461525 ZBTB38Q8NAP3 1195 aaPredicted RBP22.81■■□□□ 1.24
COL1A2-202ENST00000461525 ITGBL1O95965 494 aaPredicted RBP22.8■■□□□ 1.24
COL1A2-202ENST00000461525 HSP90B1P14625 803 aaKnown RBP22.8■■□□□ 1.24
COL1A2-202ENST00000461525 CELF1Q92879 486 aaKnown RBP22.8■■□□□ 1.24
COL1A2-202ENST00000461525 LAMB2P55268 1798 aa22.79■■□□□ 1.24
COL1A2-202ENST00000461525 EPS15P42566 896 aa22.79■■□□□ 1.24
COL1A2-202ENST00000461525 MAP1SQ66K74 1059 aaPredicted RBP22.79■■□□□ 1.24
COL1A2-202ENST00000461525 CCDC191Q8NCU4 936 aa22.79■■□□□ 1.24
COL1A2-202ENST00000461525 CXCL9Q07325 125 aa22.78■■□□□ 1.24
COL1A2-202ENST00000461525 CNTROBQ8N137 903 aa22.78■■□□□ 1.24
COL1A2-202ENST00000461525 METTL22Q9BUU2 404 aaPredicted RBP22.78■■□□□ 1.24
COL1A2-202ENST00000461525 STK31Q9BXU1 1019 aa22.78■■□□□ 1.24
COL1A2-202ENST00000461525 CWC25Q9NXE8 425 aaPredicted RBP22.78■■□□□ 1.24
COL1A2-202ENST00000461525 MKRN1Q9UHC7 482 aaKnown RBP22.78■■□□□ 1.24
COL1A2-202ENST00000461525 IL16Q14005 1332 aa22.78■■□□□ 1.24
COL1A2-202ENST00000461525 PCCAP05165 728 aaPredicted RBP22.77■■□□□ 1.24
COL1A2-202ENST00000461525 NCBP3Q53F19 620 aaKnown RBP22.77■■□□□ 1.24
COL1A2-202ENST00000461525 ADAMTSL1Q8N6G6 1762 aa22.76■■□□□ 1.23
COL1A2-202ENST00000461525 TMEM88BA6NKF7 163 aa22.76■■□□□ 1.23
COL1A2-202ENST00000461525 CIAPIN1Q6FI81 312 aa22.76■■□□□ 1.23
COL1A2-202ENST00000461525 NSFL1CQ9UNZ2 370 aaKnown RBP22.76■■□□□ 1.23
COL1A2-202ENST00000461525 MAP3K2Q9Y2U5 619 aa22.76■■□□□ 1.23
COL1A2-202ENST00000461525 DDX60Q8IY21 1712 aaKnown RBP22.76■■□□□ 1.23
COL1A2-202ENST00000461525 TWISTNBQ3B726 338 aaPredicted RBP22.75■■□□□ 1.23
COL1A2-202ENST00000461525 USP50Q70EL3 339 aaPredicted RBP22.75■■□□□ 1.23
COL1A2-202ENST00000461525 GPRC5DQ9NZD1 345 aa22.75■■□□□ 1.23
COL1A2-202ENST00000461525 RAD17O75943 681 aa22.74■■□□□ 1.23
COL1A2-202ENST00000461525 GMPSP49915 693 aaPredicted RBP22.74■■□□□ 1.23
COL1A2-202ENST00000461525 RPS8P62241 208 aaKnown RBP22.74■■□□□ 1.23
COL1A2-202ENST00000461525 TNIP1Q15025 636 aa22.74■■□□□ 1.23
COL1A2-202ENST00000461525 KSR2Q6VAB6 950 aa22.74■■□□□ 1.23
COL1A2-202ENST00000461525 DUOX1Q9NRD9 1551 aa22.74■■□□□ 1.23
COL1A2-202ENST00000461525 CNTNAP1P78357 1384 aa22.74■■□□□ 1.23
COL1A2-202ENST00000461525 LTBP1Q14766 1721 aa22.74■■□□□ 1.23
COL1A2-202ENST00000461525 PI4KAP2A4QPH2 592 aa22.73■■□□□ 1.23
COL1A2-202ENST00000461525 HSPA1AP0DMV8 641 aaKnown RBP22.73■■□□□ 1.23
COL1A2-202ENST00000461525 HSPA1BP0DMV9 641 aaKnown RBP22.73■■□□□ 1.23
COL1A2-202ENST00000461525 GPSM2P81274 684 aa22.73■■□□□ 1.23
COL1A2-202ENST00000461525 WASHC4Q2M389 1173 aa22.73■■□□□ 1.23
COL1A2-202ENST00000461525 CCDC152Q4G0S7 254 aa22.73■■□□□ 1.23
COL1A2-202ENST00000461525 PI4KAP1Q8N8J0 262 aa22.73■■□□□ 1.23
COL1A2-202ENST00000461525 ADARB2Q9NS39 739 aaKnown RBP22.73■■□□□ 1.23
COL1A2-202ENST00000461525 C6orf229H3BNL8 230 aa22.72■■□□□ 1.23
COL1A2-202ENST00000461525 PDE8AO60658 829 aa22.72■■□□□ 1.23
COL1A2-202ENST00000461525 NEXNQ0ZGT2 675 aa22.72■■□□□ 1.23
COL1A2-202ENST00000461525 JARID2Q92833 1246 aaPredicted RBP22.72■■□□□ 1.23
COL1A2-202ENST00000461525 BCL2L13Q9BXK5 485 aa22.72■■□□□ 1.23
COL1A2-202ENST00000461525 SEC31BQ9NQW1 1179 aa22.72■■□□□ 1.23
COL1A2-202ENST00000461525 CDHR2Q9BYE9 1310 aa22.72■■□□□ 1.23
COL1A2-202ENST00000461525 LRRC37AA6NMS7 1700 aa22.71■■□□□ 1.23
COL1A2-202ENST00000461525 EYA3Q99504 573 aa22.71■■□□□ 1.23
COL1A2-202ENST00000461525 SALL2Q9Y467 1007 aaPredicted RBP22.71■■□□□ 1.23
COL1A2-202ENST00000461525 YDJCA8MPS7 323 aa22.7■■□□□ 1.22
COL1A2-202ENST00000461525 RIMBP2O15034 1052 aa22.7■■□□□ 1.22
COL1A2-202ENST00000461525 CCDC85AQ96PX6 553 aaPredicted RBP22.7■■□□□ 1.22
COL1A2-202ENST00000461525 POLLQ9UGP5 575 aa22.7■■□□□ 1.22
COL1A2-202ENST00000461525 FANCIQ9NVI1 1328 aa22.7■■□□□ 1.22
COL1A2-202ENST00000461525 COL4A1P02462 1669 aa22.69■■□□□ 1.22
COL1A2-202ENST00000461525 SLC4A2P04920 1241 aa22.69■■□□□ 1.22
COL1A2-202ENST00000461525 IGKV5-2P06315 115 aa22.69■■□□□ 1.22
COL1A2-202ENST00000461525 WDR63Q8IWG1 891 aa22.69■■□□□ 1.22
COL1A2-202ENST00000461525 DBNDD1Q9H9R9 158 aa22.69■■□□□ 1.22
COL1A2-202ENST00000461525 G2E3Q7L622 706 aa22.68■■□□□ 1.22
COL1A2-202ENST00000461525 TBC1D16Q8TBP0 767 aa22.68■■□□□ 1.22
COL1A2-202ENST00000461525 TAF1P21675 1872 aa22.68■■□□□ 1.22
COL1A2-202ENST00000461525 CTSWP56202 376 aa22.67■■□□□ 1.22
COL1A2-202ENST00000461525 COL13A1Q5TAT6 717 aaPredicted RBP22.67■■□□□ 1.22
COL1A2-202ENST00000461525 PODXL2Q9NZ53 605 aa22.67■■□□□ 1.22
COL1A2-202ENST00000461525 ANKIB1Q9P2G1 1089 aa22.67■■□□□ 1.22
COL1A2-202ENST00000461525 ABT1Q9ULW3 272 aaKnown RBP22.67■■□□□ 1.22
COL1A2-202ENST00000461525 UFL1O94874 794 aa22.66■■□□□ 1.22
COL1A2-202ENST00000461525 VEGFBP49765 207 aa22.66■■□□□ 1.22
COL1A2-202ENST00000461525 FLIIQ13045 1269 aa22.66■■□□□ 1.22
COL1A2-202ENST00000461525 CWF19L2Q2TBE0 894 aaKnown RBP22.66■■□□□ 1.22
COL1A2-202ENST00000461525 ANKRD18AQ8IVF6 992 aa22.66■■□□□ 1.22
COL1A2-202ENST00000461525 GPR101Q96P66 508 aaPredicted RBP22.66■■□□□ 1.22
COL1A2-202ENST00000461525 RASSF10A6NK89 507 aa22.65■■□□□ 1.22
COL1A2-202ENST00000461525 NEURL1BA8MQ27 555 aa22.65■■□□□ 1.22
COL1A2-202ENST00000461525 PSMD14O00487 310 aa22.65■■□□□ 1.22
COL1A2-202ENST00000461525 ECE2O60344 883 aa22.65■■□□□ 1.22
COL1A2-202ENST00000461525 FMR1Q06787 632 aaKnown RBP eCLIP22.65■■□□□ 1.22
COL1A2-202ENST00000461525 DOK7Q18PE1 504 aa22.65■■□□□ 1.22
COL1A2-202ENST00000461525 ZC3H12CQ9C0D7 883 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms